Name: Acinetobacter sp. MR5
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 157907

Type strain:

Species: Acinetobacter sp.

Strain Designation: MR5

Culture col. no.: DSM 106631

Strain history: <- S. Yasmin, National Institute for Biotechnology and Genetic Engineering; MR5 <- M. Rasul; MR5

NCBI tax ID(s): 472 (species)

SI-ID 404102

DSM 106631

Special Collections

DSMZ

Other strains from Acinetobacter sp.

Section

Acinetobacter sp. MR5 is a bacterium that was isolated from Rhizospheric soil of Basmati Rice.

16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Pseudomonadales*
	Family	*Moraxellaceae*
	Genus	*Acinetobacter*
	Full Scientific Name (LPSN)	Acinetobacter Brisou and Prévot 1954 (Approved Lists 1980)

Information on culture and growth conditions Culture and growth conditions

[Ref.: #64480]

Culture medium

COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)

[Ref.: #64480]

Culture medium growth

[Ref.: #64480]

Culture medium link

Medium recipe at MediaDive

[Ref.: #64480]

Culture medium composition

expand / minimize

[Ref.: #64480]

Culture medium

NUTRIENT AGAR (DSMZ Medium 1)

[Ref.: #64480]

Culture medium growth

[Ref.: #64480]

Culture medium link

Medium recipe at MediaDive

[Ref.: #64480]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #64480]			growth	30 °C

Information on physiology and metabolism Physiology and metabolism

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68369]	adipate ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	arginine ChEBI	-	hydrolysis	* from API 20NE
[Ref.: #68369]	D-glucose ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	D-glucose ChEBI	-	fermentation	* from API 20NE
[Ref.: #68369]	decanoate ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	esculin ChEBI	-	hydrolysis	* from API 20NE
[Ref.: #68369]	gelatin ChEBI	-	hydrolysis	* from API 20NE
[Ref.: #68369]	gluconate ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	malate ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	nitrate ChEBI	-	reduction	* from API 20NE
[Ref.: #68369]	tryptophan ChEBI	-	energy source	* from API 20NE
[Ref.: #68369]	urea ChEBI	-	hydrolysis	* from API 20NE
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #68369]		indole ChEBI	no	* from API 20NE

	Physiological tests	Metabolite	Indole test
[Ref.: #68369]		indole ChEBI	-	* from API 20NE

	Enzyme	Enzyme activity	EC number
[Ref.: #68369]	arginine dihydrolase	-	3.5.3.6	* from API 20NE
[Ref.: #68369]	beta-glucosidase	-	3.2.1.21	* from API 20NE
[Ref.: #68369]	cytochrome oxidase	-	1.9.3.1	* from API 20NE
[Ref.: #68369]	gelatinase	-		* from API 20NE
[Ref.: #68369]	urease	-	3.5.1.5	* from API 20NE

API® 20NE:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitratesNO3	Indole productionTRP	Fermentation of D-glucoseGLU_ Ferm	Arginine dihydrolaseADH (Arg)	Urease/urea hydrolysisURE	Esculin hydrolysis/beta-GlucosidaseESC	Gelatinase/gelatin hydrolysisGEL	beta-GalactosidasePNPG	Assimilation of D-glucoseGLU_ Assim	Assimilation of L-arabinoseARA	Assimilation of D-mannoseMNE	Assimilation of D-mannitolMAN	Assimilation of N-acetyl-glucosamineNAG	Assimilation of maltoseMAL	Assimilation of gluconateGNT	Assimilation of capric acidCAP	Assimilation adipic acidADI	Assimilation of malic acidMLT	Assimilation of citric acidCIT	Assimilation of phenyl-acetic acidPAC	Cytochrome oxidaseOX
[Ref.: #64480]	24820	-	-	-	-	-	-	-	-	+	+/-	+/-	+/-	+/-	+/-	+	+	+	+	+	+	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #64480]	Sample type/isolated from	Rhizospheric soil of Basmati Rice
[Ref.: #64480]	Geographic location (country and/or sea, region)	Kala Shah Kaku, District Sheikhupura
[Ref.: #64480]	Country	Pakistan
[Ref.: #64480]	Country ISO 3 Code	PAK
[Ref.: #64480]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Host	#Plants	#Herbaceous plants (Grass,Crops)
#Host Body-Site	#Plant	#Rhizosphere
#Environmental	#Terrestrial	#Soil

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #64480]	Acinetobacter sp. MR5 partial 16S rRNA gene, strain MR5	LT629134	876	GenBank ENA	1910910 tax ID

Availability in culture collections External links

[Ref.: #64480]

Culture collection no.

DSM 106631

[Ref.: #110760]

SI-ID 404102

Literature:

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Glucose dehydrogenase gene containing phosphobacteria for biofortification of Phosphorus with growth promotion of rice.	Rasul M, Yasmin S, Suleman M, Zaheer A, Reitz T, Tarkka MT, Islam E, Mirza MS	Microbiol Res	10.1016/j.micres.2019.03.004	2019	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#64480

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 106631

#68369

Automatically annotated from API 20NE .

#110760

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID404102.1 )

* These data were automatically processed and therefore are not curated

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