Peredibacter starrii (DSM 17039, ATCC 15145, NCCB 72004)

Name: Peredibacter starrii (DSM 17039, ATCC 15145, NCCB 72004)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 1578

Type strain

Strain Designation A3.12

Culture col. no. DSM 17039 ATCC 15145 NCCB 72004 A3.12

NCBI tax ID(s) 28202

Special Collections DSMZ

History <- Y. Davidov <- ATCC <- H. Stolp and M. P. Starr; A3.12

Links

Peredibacter starrii A3.12 is a bacterium that was isolated from soil.

16S sequence Bacteria

Name and taxonomic classification

SI-ID 45579

ATCC 15145,NCIMB 9561,DSM50758,NCIB 9561,LMD 72.4,NCCB 72004,DSM 17039

@ref 20215

Last LPSN update 2026-02-09 11:18:08

Domain Bacteria

Phylum Pseudomonadota

Class Oligoflexia

Order Bacteriovoracales

Family Peredibacteraceae

Genus Peredibacter

Species Peredibacter starrii

Full scientific name Peredibacter starrii (Seidler et al. 1972) Davidov and Jurkevitch 2004

Synonyms (2)

Bdellovibrio starrii
Bacteriovorax starrii

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
6700	PEREDIBACTER (DN) MEDIUM (DSMZ Medium 1012)		Medium recipe at MediaDive	Name: PEREDIBACTER (DN) MEDIUM (DSMZ Medium 1012) Composition: Nutrient broth 0.8 g/l MgCl2 x 6 H2O 0.6 g/l Casamino acids 0.5 g/l CaCl2 x 2 H2O 0.3 g/l Yeast extract 0.1 g/l Distilled water
6700	BDELLOVIBRIO MEDIUM (DSMZ Medium 257)		Medium recipe at MediaDive	Name: BDELLOVIBRIO (YP) MEDIUM (DSMZ Medium 257) Composition: Yeast extract 3.0 g/l Peptone 0.6 g/l Tris-HCl buffer

Culture temp

@ref	Growth	Type	Temperature (°C)
6700	positive	growth	30

Physiology and metabolism

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
6700	soil	California	USA	USA	North America

Taxonmaps

69479

Global distribution of 16S sequence AF084852 (>99% sequence identity) for Peredibacter starrii subclade from Microbeatlas

Aquatic Samples	197
Soil Samples	305
Animal Samples	36
Plant Samples	51
Total Samples	589

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
6700	1	Risk group (German classification) According to TRBA 466

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20218	Bdellovibrio starrii 16S rRNA gene, partial cds	M61231	518		28202
6700	Bdellovibrio starrii 16S ribosomal RNA gene, partial sequence	AF084852	1457		28202

GC content

6700

GC-content (mol%)43.5

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Proteome	Bacterial predators possess unique membrane lipid structures.	Muller FD, Beck S, Strauch E, Linscheid MW	Lipids	10.1007/s11745-011-3614-5	2011
Phylogeny	Phylogenetic relationships amongst the saltwater members of the genus Bacteriovorax using rpoB sequences and reclassification of Bacteriovorax stolpii as Bacteriolyticum stolpii gen. nov., comb. nov.	Pineiro SA, Williams HN, Stine OC	Int J Syst Evol Microbiol	10.1099/ijs.0.65710-0	2008
Phylogeny	Diversity and evolution of Bdellovibrio-and-like organisms (BALOs), reclassification of Bacteriovorax starrii as Peredibacter starrii gen. nov., comb. nov., and description of the Bacteriovorax-Peredibacter clade as Bacteriovoracaceae fam. nov.	Davidov Y, Jurkevitch E	Int J Syst Evol Microbiol	10.1099/ijs.0.02978-0	2004
Phylogeny	A proposal for the reclassification of Bdellovibrio stolpii and Bdellovibrio starrii into a new genus, Bacteriovorax gen. nov. as Bacteriovorax stolpii comb. nov. and Bacteriovorax starrii comb. nov., respectively.	Baer ML, Ravel J, Chun J, Hill RT, Williams HN	Int J Syst Evol Microbiol	10.1099/00207713-50-1-219	2000
Phylogeny	Further taxonomic characterization of the genus Bdellovibrio.	Torrella F, Guerrero R, Seidler RJ	Can J Microbiol	10.1139/m78-222	1978

References

#6700	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 17039
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Peredibacter starrii (DSM 17039, ATCC 15145, NCCB 72004)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

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