Name: Halobacteriovorax litoralis JS5
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 1577

Type strain:

Species: Halobacteriovorax litoralis

Strain Designation: JS5

Culture col. no.: DSM 15409, ATCC BAA-684

Strain history: <- H. N. Williams, University of Maryland, Baltimore, USA; JS5 <- H. N. Williams {1993}

NCBI tax ID(s): 97089 (species)

SI-ID 132775

ATCC BAA-684, DSM 15409

Section

Halobacteriovorax litoralis JS5 is a mesophilic bacterium that was isolated from crab gill.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Oligoflexia*
	Order	*Bacteriovoracales*
	Family	*Halobacteriovoracaceae*
	Genus	*Halobacteriovorax*
	Species	**Halobacteriovorax litoralis**
	Full Scientific Name (LPSN)	Halobacteriovorax litoralis (Baer et al. 2004) Koval et al. 2015

Synonym

Bacteriovorax litoralis

Information on culture and growth conditions Culture and growth conditions

[Ref.: #5798]

Culture medium

HALOBACTERIOVORAX MEDIUM (DSMZ Medium 1013)

[Ref.: #5798]

Culture medium growth

[Ref.: #5798]

Culture medium link

Medium recipe at MediaDive

[Ref.: #5798]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #5798]			growth	25 °C

[Ref.: #5798]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #5798]	Sample type/isolated from	crab gill
[Ref.: #5798]	Geographic location (country and/or sea, region)	Maryland, Chesapaeke Bay, Patuxent River
[Ref.: #5798]	Country	USA
[Ref.: #5798]	Country ISO 3 Code	USA
[Ref.: #5798]	Continent	North America
* marker position based on {}

Isolation sources categories

#Host	#Arthropoda	#Crustacea
#Host Body-Site	#Oral cavity and airways	#Airways

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AF084859 (>99% sequence identity) for Halobacteriovorax litoralis subclade from Microbeatlas

Aquatic Samples	835
Soil Samples	56
Animal Samples	88
Plant Samples	3
Total Samples	982

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #5798]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #5798]	Bdellovibrio sp. JS5 16S ribosomal RNA gene, partial sequence	AF084859	1475	ENA	97089 tax ID

[Ref.: #5798]

GC-content

37.8 mol%

Availability in culture collections External links

[Ref.: #5798]

Culture collection no.

DSM 15409, ATCC BAA-684

[Ref.: #71222]

SI-ID 132775

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Reclassification of Bacteriovorax marinus as Halobacteriovorax marinus gen. nov., comb. nov. and Bacteriovorax litoralis as Halobacteriovorax litoralis comb. nov.; description of Halobacteriovoraceae fam. nov. in the class Deltaproteobacteria.	Koval SF, Williams HN, Stine OC	Int J Syst Evol Microbiol	10.1099/ijs.0.070201-0	2014	*
Phylogeny	Reclassification of salt-water Bdellovibrio sp. as Bacteriovorax marinus sp. nov. and Bacteriovorax litoralis sp. nov.	Baer ML, Ravel J, Pineiro SA, Guether-Borg D, Williams HN	Int J Syst Evol Microbiol	10.1099/ijs.0.02458-0	2004	*

References

#5798

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 15409

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#71222

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID132775.1 )

* These data were automatically processed and therefore are not curated

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