Name: Phocaeicola vulgatus H6_5
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 157628

Type strain:

Species: Phocaeicola vulgatus

Strain Designation: H6_5

Culture col. no.: DSM 108234

Strain history: <- H. Browne, Wellcome Trust Sanger Institute, Hinxton, Cambridgeshire, United Kingdom; H6_5

NCBI tax ID(s): 821 (species)

SI-ID 404712

DSM 108234

Special Collections

Other strains from Phocaeicola vulgatus

Section

Phocaeicola vulgatus H6_5 is a human pathogen that was isolated from human faeces.

human pathogen
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Bacteroidia*
	Order	*Bacteroidales*
	Family	*Bacteroidaceae*
	Genus	*Phocaeicola*
	Species	**Phocaeicola vulgatus**
	Full Scientific Name (LPSN)	Phocaeicola vulgatus (Eggerth and Gagnon 1933) García-López et al. 2020

Synonym

Bacteroides vulgatus

Information on culture and growth conditions Culture and growth conditions

[Ref.: #64197]

Culture medium

PYG MEDIUM (MODIFIED) (DSMZ Medium 104)

[Ref.: #64197]

Culture medium growth

[Ref.: #64197]

Culture medium link

Medium recipe at MediaDive

[Ref.: #64197]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #64197]			growth	37 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #64197]	Sample type/isolated from	human faeces
[Ref.: #64197]	Geographic location (country and/or sea, region)	Cambridgeshire
[Ref.: #64197]	Country	United Kingdom
[Ref.: #64197]	Country ISO 3 Code	GBR
[Ref.: #64197]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Host	#Human	-
#Host Body Product	#Gastrointestinal tract	#Feces (Stool)

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #64197]	Pathogenicity (human)	yes, in single cases
[Ref.: #64197]	Biosafety level	1	Risk group (German classification) According to TRBA 466

Availability in culture collections External links

[Ref.: #64197]

Culture collection no.

DSM 108234

[Ref.: #110497]

SI-ID 404712

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#64197

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 108234

#110497

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID404712.1 )

* These data were automatically processed and therefore are not curated

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