Streptomyces parvus (DSM 40348, ATCC 12433, CBS 427.61)

Cell morphology

Multimedia

• @ref:	9476
  multimedia content:	DSM_40348.jpg
  multimedia.multimedia content:	https://www.dsmz.de/microorganisms/photos/DSM_40348.jpg
  caption:	Medium 65 28°C
  intellectual property rights:	© Leibniz-Institut DSMZ
  manual_annotation:	1

Culture medium

@ref	Name	Growth	Medium link	Composition
9476	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)		Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
9476	ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)		Medium recipe at MediaDive	Name: ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) Composition: Agar 20.0 g/l Rolled oats 20.0 g/l ZnSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l FeSO4 x 7 H2O 0.001 g/l Distilled water

Culture temp

Oxygen tolerance

Spore formation

Compound production

Isolation source categories

Isolation

Taxonmaps

69479

Global distribution of 16S sequence DQ442537 (>99% sequence identity) for Streptomyces from Microbeatlas

Aquatic Samples	286
Soil Samples	2441
Animal Samples	1009
Plant Samples	294
Total Samples	4030

Risk assessment

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM1464887v1 assembly for Streptomyces parvus JCM 4069	scaffold	GCA_014648875	66428.6	8112978473	66428	67.25
124043	ASM863253v1 assembly for Streptomyces parvus NRRL B-1455	scaffold	GCA_008632535	66428.4	8117032247	66428

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20218	Streptomyces parvus gene for 16S ribosomal RNA, partial sequence, strain: JCM 4069	D43998	120		66428
20218	Streptomyces parvus gene for 16S rRNA, partial sequence, strain: NBRC 14599	AB184603	1458		66428
20218	Streptomyces parvus gene for 16S rRNA, partial sequence, strain: NBRC 3388	AB184756	1478		66428
20218	Streptomyces parvus strain NRRL B-1455T 16S ribosomal RNA gene, partial sequence	DQ442537	1493		66428
124043	Streptomyces parvus strain JCM 4069 16S ribosomal RNA gene, partial sequence.	MT760478	1324		66428

Predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Genetics	Genome-Based Mining of Carpatamides I-M and Their Candidate Biosynthetic Gene Cluster.	Shen SM, Xie YC, Tu LR, Wu ME, Wang YM, Song CH, Sun YH, Luo MH.	Mar Drugs	10.3390/md22110521	2024
	Draft Genome Sequence of a Granaticin-Producing Strain of Streptomyces parvus Isolated from a Roman Tomb in the Necropolis of Carmona, Spain.	Gonzalez-Pimentel JL, Jurado V, Laiz L, Saiz-Jimenez C.	Microbiol Resour Announc	10.1128/mra.01127-19	2019
	Biodegradation of lignocellulosic wastes by thermotolerant cellulolytic actinomycetal consortium isolated from Uhud Mountain, Madinah, Saudi Arabia.	Mawad AMM, Al-Turk AIM, Mohamed NH, Almutrafy A, Alhujaily A, Saleem N, Albasri HM.	Biodegradation	10.1007/s10532-025-10171-z	2025
Genetics	Novel Insights and Genomic Characterization of Coral-Associated Microorganisms from Maldives Displaying Antimicrobial, Antioxidant, and UV-Protectant Activities.	Palma Esposito F, Lopez-Mobilia A, Tangherlini M, Casella V, Coppola A, Varola G, Vitale L, Della Sala G, Tedesco P, Montano S, Seveso D, Galli P, Coppola D, de Pascale D, Galasso C.	Biology (Basel)	10.3390/biology14040401	2025
Metabolism	Characterization of the Aminosugar Biosynthetic and Regulatory Genes of Vicenistatin in Monodonata labio-Associated Streptomyces parvus SCSIO Mla-L010.	Liang Z, Li J, Ling C, Xu R, Yi X, Ju J, Li Q.	J Nat Prod	10.1021/acs.jnatprod.1c01044	2022
Genetics	Anti-Vibrio parahaemolyticus compounds from Streptomyces parvus based on Pan-genome and subtractive proteomics.	Liu W, Ou P, Tian F, Liao J, Ma Y, Wang J, Jin X.	Front Microbiol	10.3389/fmicb.2023.1218176	2023
Pathogenicity	Bioproduction, structure elucidation and in vitro antiproliferative effect of eumelanin pigment from Streptomyces parvus BSB49.	Bayram S, Dengiz C, Gercek YC, Cetin I, Topcul MR.	Arch Microbiol	10.1007/s00203-020-01956-2	2020
Metabolism	Evaluation of Syzygium aromaticum aqueous extract as an eco-friendly inhibitor for microbiologically influenced corrosion of carbon steel in oil reservoir environment.	Parthipan P, AlSalhi MS, Devanesan S, Rajasekar A.	Bioprocess Biosyst Eng	10.1007/s00449-021-02524-8	2021
Genetics	Exploring Indonesian actinomycete extracts for anti-tubercular compounds: Integrating inhibition assessment, genomic analysis, and prediction of its target by molecular docking.	Nurkanto A, Masrukhin, Erdian Tampubolon JC, Ewaldo MF, Putri AL, Ratnakomala S, Setiawan R, Fathoni A, Palupi KD, Rahmawati Y, Waluyo D, Prabandari EE, Pujiyanto S, Sumii Y, Agusta A, Shibata N, Matsumoto S, Nozaki T.	Heliyon	10.1016/j.heliyon.2024.e35648	2024
	Evaluation of Biocompatibility and Antagonistic Properties of Microorganisms Isolated from Natural Sources for Obtaining Biofertilizers Using Microalgae Hydrolysate.	Babich O, Sukhikh S, Dyshlyuk L, Shishko O, Milentyeva I, Prosekov A, Pavsky V, Ivanova S, Dolganyuk V.	Microorganisms	10.3390/microorganisms9081667	2021
Metabolism	Marine actinomycetes as bioremediators in Penaeus monodon rearing system.	Babu DT, Archana K, Kachiprath B, Solomon S, Jayanath G, Singh ISB, Philip R.	Fish Shellfish Immunol	10.1016/j.fsi.2018.01.037	2018
	Nature and origin of the violet stains on the walls of a Roman tomb.	Dominguez-Monino I, Diaz-Herraiz M, Jurado V, Laiz L, Miller AZ, Santos JL, Alonso E, Saiz-Jimenez C.	Sci Total Environ	10.1016/j.scitotenv.2017.04.017	2017
	Discovery and synthesis of leaderless bacteriocins from the Actinomycetota.	Hourigan D, Miceli de Farias F, O'Connor PM, Hill C, Ross RP.	J Bacteriol	10.1128/jb.00298-24	2024
	Screening of Red Sea- and Mediterranean Sea-derived Actinomycetes for Antimicrobial and Antitumor activities: LC-ESI-HRMS-based Metabolomics Study.	Abdel-Razik MA, Azmy AF, Dishisha T, El-Gendy AO, Afzan A, Kamal N, Tawfike A, Sebak M.	Microb Cell Fact	10.1186/s12934-025-02759-0	2025
Metabolism	Extracellular production of the oncolytic enzyme, L-asparaginase, by newly isolated Streptomyces sp. strain NEAE-95 as potential microbial cell factories: optimization of culture conditions using response surface methodology.	El-Naggar NE.	Curr Pharm Biotechnol	10.2174/1389201015666141113123910	2015
	Antibacterial and Antitumor Potential of Actinomycetes Isolated from Mangrove Soil in the Maowei Sea of the Southern Coast of China.	Gong B, Chen S, Lan W, Huang Y, Zhu X.	Iran J Pharm Res		2018
Enzymology	Purification and characterization of the enzyme cholesterol oxidase from a new isolate of Streptomyces sp.	Praveen V, Srivastava A, Tripathi CK.	Appl Biochem Biotechnol	10.1007/s12010-011-9360-6	2011
	Deacylation of Echinocandin B by Streptomyces species: a novel method for the production of Echinocandin B nucleus.	Shivakumar MC, Manohar S, Ishwar B, Raghu P, Savitha J.	3 Biotech	10.1007/s13205-019-1946-7	2019
Metabolism	Identification of cholesterol-assimilating actinomycetes strain and application of statistical modeling approaches for improvement of cholesterol oxidase production by Streptomyces anulatus strain NEAE-94.	El-Naggar NE, El-Shweihy NM.	BMC Microbiol	10.1186/s12866-020-01775-x	2020
Enzymology	Purification, characterization and amino acid content of cholesterol oxidase produced by Streptomyces aegyptia NEAE 102.	El-Naggar NE, Deraz SF, Soliman HM, El-Deeb NM, El-Shweihy NM.	BMC Microbiol	10.1186/s12866-017-0988-4	2017
	Endophytic Streptomyces laurentii Mediated Green Synthesis of Ag-NPs with Antibacterial and Anticancer Properties for Developing Functional Textile Fabric Properties.	Eid AM, Fouda A, Niedbala G, Hassan SE, Salem SS, Abdo AM, F Hetta H, Shaheen TI.	Antibiotics (Basel)	10.3390/antibiotics9100641	2020
	Bactericidal and In-Vitro Cytotoxic Efficacy of Silver Nanoparticles (Ag-NPs) Fabricated by Endophytic Actinomycetes and Their Use as Coating for the Textile Fabrics.	Salem SS, El-Belely EF, Niedbala G, Alnoman MM, Hassan SE, Eid AM, Shaheen TI, Elkelish A, Fouda A.	Nanomaterials (Basel)	10.3390/nano10102082	2020
Pathogenicity	Efficacy of metabolites of a Streptomyces strain (AS1) to control growth and mycotoxin production by Penicillium verrucosum, Fusarium verticillioides and Aspergillus fumigatus in culture.	Danial AM, Medina A, Sulyok M, Magan N.	Mycotoxin Res	10.1007/s12550-020-00388-7	2020
	Optimization of culture conditions by response surface methodology and unstructured kinetic modeling for bioactive metabolite production by Nocardiopsis litoralis VSM-8.	Managamuri U, Vijayalakshmi M, Poda S, Ganduri VS, Babu RS.	3 Biotech	10.1007/s13205-016-0535-2	2016
	A Marine Actinomycete Rescues Caenorhabditis elegans from Pseudomonas aeruginosa Infection through Restitution of Lysozyme 7.	Fatin SN, Boon-Khai T, Shu-Chien AC, Khairuddean M, Al-Ashraf Abdullah A.	Front Microbiol	10.3389/fmicb.2017.02267	2017
Enzymology	Purification, characterization and immunogenicity assessment of glutaminase free L-asparaginase from Streptomyces brollosae NEAE-115.	El-Naggar NE, Deraz SF, El-Ewasy SM, Suddek GM.	BMC Pharmacol Toxicol	10.1186/s40360-018-0242-1	2018
Metabolism	Purification and characterisation of the extracellular cholesterol oxidase enzyme from Enterococcus hirae.	Yehia HM, Hassanein WA, Ibraheim SM.	BMC Microbiol	10.1186/s12866-015-0517-2	2015
	Extracellular cholesterol oxidase production by Streptomyces aegyptia, in vitro anticancer activities against rhabdomyosarcoma, breast cancer cell-lines and in vivo apoptosis.	El-Naggar NE, Soliman HM, El-Shweihy NM.	Sci Rep	10.1038/s41598-018-20786-3	2018
	Chemical basis of the synergism and antagonism in microbial communities in the nests of leaf-cutting ants.	Schoenian I, Spiteller M, Ghaste M, Wirth R, Herz H, Spiteller D.	Proc Natl Acad Sci U S A	10.1073/pnas.1008441108	2011
Enzymology	REBASE--restriction enzymes and methylases.	Roberts RJ, Macelis D.	Nucleic Acids Res	10.1093/nar/22.17.3628	1994
Genetics	Complete genome sequencing and in silico genome mining reveal the promising metabolic potential in Streptomyces strain CS-7.	Alam K, Hao J, Zhong L, Fan G, Ouyang Q, Islam MM, Islam S, Sun H, Zhang Y, Li R, Li A.	Front Microbiol	10.3389/fmicb.2022.939919	2022
Pathogenicity	Collismycin C from the Micronesian Marine Bacterium Streptomyces sp. MC025 Inhibits Staphylococcus aureus Biofilm Formation.	Lee JH, Kim E, Choi H, Lee J.	Mar Drugs	10.3390/md15120387	2017
	Potential secondary metabolite from Indonesian Actinobacteria (InaCC A758) against Mycobacterium tuberculosis.	Rakhmawatie MD, Wibawa T, Lisdiyanti P, Pratiwi WR, Damayanti E, Mustofa	Iran J Basic Med Sci	10.22038/ijbms.2021.56468.12601	2021
	Phenotypic and Genomic Characterization of Streptomyces pakalii sp. nov., a Novel Species with Anti-Biofilm and Anti-Quorum Sensing Activity in ESKAPE Bacteria.	Chavez-Hernandez M, Ortiz-Alvarez J, Morales-Jimenez J, Villa-Tanaca L, Hernandez-Rodriguez C.	Microorganisms	10.3390/microorganisms11102551	2023