Streptomyces parvulus DSM 40048 is a bacterium that produces antibiotic compounds and was isolated from soil.
antibiotic compound production genome sequence 16S sequence Bacteria| @ref 20215 |
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| Domain Bacteria |
| Phylum Actinomycetota |
| Class Actinomycetes |
| Order Kitasatosporales |
| Family Streptomycetaceae |
| Genus Streptomyces |
| Species Streptomyces parvulus |
| Full scientific name Streptomyces parvulus corrig. Waksman and Gregory 1954 (Approved Lists 1980) |
| Synonyms (1) |
| BacDive ID | Other strains from Streptomyces parvulus (4) | Type strain |
|---|---|---|
| 15455 | S. parvulus Tü 64, DSM 40722, JCM 4682, KCC S-0682, ... | |
| 15456 | S. parvulus Tü 113, DSM 40728, ETH 32027 | |
| 15457 | S. parvulus S-20, DSM 40912 | |
| 103875 | S. parvulus ST004516, |
| @ref: | 9126 |
| multimedia content: | DSM_40048.jpg |
| multimedia.multimedia content: | https://www.dsmz.de/microorganisms/photos/DSM_40048.jpg |
| caption: | Medium 84 28°C |
| intellectual property rights: | © Leibniz-Institut DSMZ |
| manual_annotation: | 1 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 9126 | GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) | Medium recipe at MediaDive | Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water | ||
| 9126 | ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) | Medium recipe at MediaDive | Name: ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) Composition: Agar 20.0 g/l Rolled oats 20.0 g/l ZnSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l FeSO4 x 7 H2O 0.001 g/l Distilled water |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | ASM1464885v1 assembly for Streptomyces parvulus JCM 4068 | scaffold | 146923 | 67.64 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | Streptomyces parvulus gene for 16S rRNA, partial sequence | AB122767 | 565 | 146923 | ||
| 20218 | Streptomyces rochei gene for 16S ribosomal RNA, partial sequence, strain: JCM 4601 | D44257 | 121 | 1928 | ||
| 20218 | Streptomyces parvulus gene for 16S rRNA, partial sequence, strain: NBRC 13193 | AB184326 | 1476 | 146923 | ||
| 20218 | Streptomyces sp. NTRH11 gene for 16S ribosomal RNA, partial sequence | AB920591 | 1286 | 1571727 | ||
| 124043 | Streptomyces parvulus strain JCM 4068 16S ribosomal RNA gene, partial sequence. | MT760477 | 1325 | 146923 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | oxygen_tolerance | BacteriaNetⓘ | obligate aerobe | 98.64 | no |
| 125439 | gram_stain | BacteriaNetⓘ | positive | 99.07 | no |
| 125439 | spore_formation | BacteriaNetⓘ | yes | 76.88 | no |
| 125439 | motility | BacteriaNetⓘ | no | 90.11 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 90.30 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 98.39 | no |
| 125438 | aerobic | aerobicⓘ | yes | 91.06 | no |
| 125438 | spore-forming | spore-formingⓘ | yes | 91.31 | no |
| 125438 | thermophilic | thermophileⓘ | no | 97.50 | no |
| 125438 | flagellated | motile2+ⓘ | no | 88.50 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Identification and application of a strong bidirectional acmN2p promoter from actinomycin D-producing streptomycetes. | Li S, Tang D, Zhao X, Zhu M, Zhu X, Duan Y, Huang Y. | Eng Microbiol | 10.1016/j.engmic.2023.100121 | 2024 | ||
| Metabolism | Antibiotic overproduction by rpsL and rsmG mutants of various actinomycetes. | Tanaka Y, Komatsu M, Okamoto S, Tokuyama S, Kaji A, Ikeda H, Ochi K. | Appl Environ Microbiol | 10.1128/aem.00681-09 | 2009 | |
| Pathogenicity | Activation and products of the cryptic secondary metabolite biosynthetic gene clusters by rifampin resistance (rpoB) mutations in actinomycetes. | Tanaka Y, Kasahara K, Hirose Y, Murakami K, Kugimiya R, Ochi K. | J Bacteriol | 10.1128/jb.00147-13 | 2013 | |
| Protoplast fusion permits high-frequency transfer of a Streptomyces determinant which mediates actinomycin synthesis. | Ochi K. | J Bacteriol | 10.1128/jb.150.2.592-597.1982 | 1982 | ||
| High-frequency fusion of Streptomyces parvulus or Streptomyces antibioticus protoplasts induced by polyethylene glycol. | Ochi K, Hitchcock MJ, Katz E. | J Bacteriol | 10.1128/jb.139.3.984-992.1979 | 1979 | ||
| Heterologous expression of an engineered biosynthetic pathway: functional dissection of type II polyketide synthase components in Streptomyces species. | Kim ES, Cramer KD, Shreve AL, Sherman DH. | J Bacteriol | 10.1128/jb.177.5.1202-1207.1995 | 1995 | ||
| Metabolism | Metabolic regulation in Streptomyces parvulus during actinomycin D synthesis, studied with 13C- and 15N-labeled precursors by 13C and 15N nuclear magnetic resonance spectroscopy and by gas chromatography-mass spectrometry. | Inbar L, Lapidot A. | J Bacteriol | 10.1128/jb.170.9.4055-4064.1988 | 1988 | |
| Metabolism | 13C nuclear magnetic resonance and gas chromatography-mass spectrometry studies of carbon metabolism in the actinomycin D producer Streptomyces parvulus by use of 13C-labeled precursors. | Inbar L, Lapidot A. | J Bacteriol | 10.1128/jb.173.24.7790-7801.1991 | 1991 | |
| Metabolism | Control of the actinomycin biosynthetic pathway in and actinomycin resistance of Streptomyces spp. | Ochi K. | J Bacteriol | 10.1128/jb.150.2.598-603.1982 | 1982 | |
| Characterization of phi HAU3, a broad-host-range temperate streptomyces phage, and development of phasmids. | Zhou X, Deng Z, Hopwood DA, Kieser T. | J Bacteriol | 10.1128/jb.176.7.2096-2099.1994 | 1994 | ||
| Metabolism | Development of a chemically defined medium for the synthesis of actinomycin D by Streptomyces parvulus. | Williams WK, Katz E. | Antimicrob Agents Chemother | 10.1128/aac.11.2.281 | 1977 | |
| Genetics of actinomycin C production in Streptomyces chrysomallus. | Haese A, Keller U. | J Bacteriol | 10.1128/jb.170.3.1360-1368.1988 | 1988 | ||
| Metabolism | Actinomycin biosynthesis by protoplasts derived from Streptomyces parvulus. | Hitchcock MJ, Katz E. | Antimicrob Agents Chemother | 10.1128/aac.13.1.104 | 1978 | |
| Transduction of plasmid DNA in Streptomyces spp. and related genera by bacteriophage FP43. | McHenney MA, Baltz RH. | J Bacteriol | 10.1128/jb.170.5.2276-2282.1988 | 1988 | ||
| Metabolism | Novel actinomycins formed by biosynthetic incorporation of cis- and trans-4-methylproline. | Katz E, Williams WK, Mason KT, Mauger AB. | Antimicrob Agents Chemother | 10.1128/aac.11.6.1056 | 1977 | |
| Metabolism | Branched-chain amino acid substitutions in the biosynthesis of the antibiotic actinomycin. | Yajim T, Mason KT, Kaltz E. | Antimicrob Agents Chemother | 10.1128/aac.7.6.773 | 1975 | |
| Enzymology | Purification and properties of ATP:GTP 3'-pyrophosphotransferase (guanosine pentaphosphate synthetase) from Streptomyces antibioticus. | Jones GH. | J Bacteriol | 10.1128/jb.176.5.1475-1481.1994 | 1994 | |
| The integrated conjugative plasmid pSAM2 of Streptomyces ambofaciens is related to temperate bacteriophages. | Boccard F, Smokvina T, Pernodet JL, Friedmann A, Guerineau M. | EMBO J | 10.1002/j.1460-2075.1989.tb03460.x | 1989 | ||
| In silico and in vitro analyses reveal the potential use of Streptomyces parvulus VNUA74 as bioagent for sustainable banana production. | Nguyen TT, Nguyen TT, Nguyen TH, Nguyen LT, Tran DT, Dinh ST, Vu TM, Nguyen CX. | Sci Rep | 10.1038/s41598-024-83520-2 | 2025 | ||
| Genetics | Genome-Guided Investigation Provides New Insights into Secondary Metabolites of Streptomyces parvulus SX6 from Aegiceras corniculatum. | Quach NT, Nguyen Vu TH, Bui TL, Pham AT, An Nguyen TT, Xuan Le TT, Thuy Ta TT, Dudhagara P, Phi QT. | Pol J Microbiol | 10.33073/pjm-2022-034 | 2022 | |
| Genetics | Metagenomic analysis reveals the roles of Actinobacteria in plasticizer-contaminated landfills and aids in identifying key degraders. | Rungsihiranrut A, Muangchinda C, Pinyakong O. | Sci Rep | 10.1038/s41598-025-03316-w | 2025 | |
| Discovery of an alternative pathway of peptidoglycan biosynthesis: A new target for pathway specific inhibitors. | Ogasawara Y, Dairi T. | J Ind Microbiol Biotechnol | 10.1093/jimb/kuab038 | 2021 | ||
| Phylogeny | Genome guided investigation of antibiotics producing actinomycetales strain isolated from a Macau mangrove ecosystem. | Hu D, Chen Y, Sun C, Jin T, Fan G, Liao Q, Mok KM, Lee MS. | Sci Rep | 10.1038/s41598-018-32076-z | 2018 | |
| Phylogeny | Characterization of Antibiotic Actinomycin D Isolated from Streptomyces parvulus Collected from Marine Sponge of Barrang Lompo Island, Makassar, Indonesia. | Rante H, Alam G, Bayu Murti Y, Ali A. | Infect Disord Drug Targets | 10.2174/0118715265306848240719061135 | 2025 | |
| A new tyrosine derivative isolated from an actinomycin D producing mangrove rhizosphere soil-derived Streptomyces parvulus A-30. | Ye J, Cen J, Wu J, Wen Z, Chen H, Xu J. | Nat Prod Res | 10.1080/14786419.2024.2429114 | 2024 | ||
| Biotechnology | Purification and characterization of a protease produced by submerged fermentation: Ultrasound-enhanced collagenolytic protease from Streptomyces parvulus. | Silva RLA, Barreiro ME, Ferreira KRC, Cardoso KBB, Neves AGD, Miranda MELC, Batista JM, Nascimento TP, Cahu TB, de Souza Bezerra R, Porto ALF, Brandao-Costa RMP. | Int J Biol Macromol | 10.1016/j.ijbiomac.2024.137749 | 2024 | |
| Bioproduction Optimization, Characterization, and Bioactivity of Extracellular Pigment Produced by Streptomyces parvulus. | Silva-Arias LD, Diaz L, Coy-Barrera E. | Int J Mol Sci | 10.3390/ijms262110762 | 2025 | ||
| Biodiversity and antifouling activity of microbes associated with gorgonian corals Leptogorgia rigida and Menella kanisa from the South China Sea. | Liao X, Dong W, Chen X, Zheng X, Chen Z, Huang R, Wei J, Zhang X. | Mar Environ Res | 10.1016/j.marenvres.2024.106783 | 2024 | ||
| Antibacterial and biofilm disruptive nonribosomal lipopeptides from Streptomyces parvulus against multidrug-resistant bacterial infections. | Kadaikunnan S, Vijayaragavan P, Rathi MA, Balamuralikrishnan B, Alharbi NS, Gopalakrishnan VK, Purushothaman S, Sivanesan R. | J Infect Public Health | 10.1016/j.jiph.2024.01.001 | 2024 | ||
| Biocontrol property of Streptomyces parvulus VRR3 in green gram plant (Vigna radiata L.) against Fusarium solani in greenhouse | Kadaikunnan S, Alharbi NS, Khaled JM, Alobaidi AS. | Physiol Mol Plant Pathol | 2023 | |||
| Genomic and physiological traits provide insights into ecological niche adaptations of mangrove endophytic Streptomyces parvulus VCCM 22513 | Quach NT, Vu THN, Bui TL, Le TTX, Nguyen TTA, Ngo CC, Phi QT. | Ann Microbiol | 2022 | |||
| Genetics | In silico exploration of biosynthetic gene clusters in marine Streptomyces sp. and Nocardiopsis sp. from the western coast of India: Genome-based profiling using whole genome sequencing. | Kumar H, Vijayakumar S, Shintre N, Tamhane V, Deshpande N, Joshi T, Mathpal S, Anbarasu A, Ramaiah S. | J Genet Eng Biotechnol | 10.1016/j.jgeb.2025.100483 | 2025 | |
| Ratio-dependent effects of photoactivated hypericin and manumycin A on their genotoxic and mutagenic potential. | Zajickova T, Kyzek S, Durovcova I, Sevcovicova A, Galova E. | Chem Biol Interact | 10.1016/j.cbi.2023.110421 | 2023 | ||
| Enzymology | Biogenic selenium nanoparticles and selenium/chitosan-Nanoconjugate biosynthesized by Streptomyces parvulus MAR4 with antimicrobial and anticancer potential. | Hassan MG, Hawwa MT, Baraka DM, El-Shora HM, Hamed AA. | BMC Microbiol | 10.1186/s12866-023-03171-7 | 2024 | |
| Purification and characterization of fibrinolytic protease from Streptomyces parvulus by polyethylene glycol-phosphate aqueous two-phase system. | Alencar VNS, Nascimento MCD, Ferreira JVDS, Batista JMDS, Cunha MNCD, Nascimento JMD, Sobral RVDS, Couto MTTD, Nascimento TP, Costa RMPB, Porto ALF, Leite ACL. | An Acad Bras Cienc | 10.1590/0001-3765202120210335 | 2021 | ||
| Inhibiting the "Undruggable" RAS/Farnesyltransferase (FTase) Cancer Target by Manumycin-related Natural Products. | Silva LR, da Silva-Junior EF. | Curr Med Chem | 10.2174/0929867328666210315123848 | 2022 | ||
| Exploring the fibrinolytic potential of marine Actinoalloteichus caeruleus isolated from Bay of Bengal coast. | Suresh KN, C SD. | BMC Microbiol | 10.1186/s12866-025-03815-w | 2025 | ||
| Dr. Sidney Farber (1903-1973): Founder of Pediatric Pathology and the Father of Modern Chemotherapy. | Kumar Upadhyay A, Prakash A, Kumar A, Jena S, Sinha N, Sharma S. | Cureus | 10.7759/cureus.68286 | 2024 | ||
| Preclinical Assessment of Dactinomycin in KMT2A-Rearranged Infant Acute Lymphoblastic Leukemia. | Chiu SK, Ferrari E, Oommen J, Malinge S, Cheung LC, Kotecha RS. | Cancers (Basel) | 10.3390/cancers17030527 | 2025 | ||
| Enzymology | Structure and Function of BorB, the Type II Thioesterase from the Borrelidin Biosynthetic Gene Cluster. | Curran SC, Pereira JH, Baluyot MJ, Lake J, Puetz H, Rosenburg DJ, Adams P, Keasling JD. | Biochemistry | 10.1021/acs.biochem.0c00126 | 2020 | |
| Screening and Identification of a Streptomyces Strain with Quorum-Sensing Inhibitory Activity and Effect of the Crude Extracts on Virulence Factors of Pseudomonas aeruginosa. | Zhang Z, Sun Y, Yi Y, Bai X, Zhu L, Zhu J, Gu M, Zhu Y, Jiang L. | Microorganisms | 10.3390/microorganisms11082079 | 2023 | ||
| Metabolism | Unlike Butylcycloheptylprodigiosin, Isolated Undecylprodigiosin from Streptomyces parvulus Is Not a MDR1 and BCRP Substrate in Multidrug-Resistant Cancers. | Mirzaei SA, Safari Kavishahi M, Keshavarz Z, Elahian F. | DNA Cell Biol | 10.1089/dna.2018.4161 | 2018 | |
| Insights into the phylogenetic diversity, biological activities, and biosynthetic potential of mangrove rhizosphere Actinobacteria from Hainan Island. | Ye JJ, Zou RJ, Zhou DD, Deng XL, Wu NL, Chen DD, Xu J. | Front Microbiol | 10.3389/fmicb.2023.1157601 | 2023 | ||
| Metabolism | Molecular Details of Actinomycin D-Treated MRSA Revealed via High-Dimensional Data. | Xia X, Liu J, Huang L, Zhang X, Deng Y, Li F, Liu Z, Huang R. | Mar Drugs | 10.3390/md20020114 | 2022 | |
| Metabolism | Multi-Omics Analysis Reveals Anti-Staphylococcus aureus Activity of Actinomycin D Originating from Streptomyces parvulus. | Lin Y, Huang L, Zhang X, Yang J, Chen X, Li F, Liu J, Huang R. | Int J Mol Sci | 10.3390/ijms222212231 | 2021 | |
| Exploring the diversity and antimicrobial potential of actinomycetes isolated from different environments in Saudi Arabia: a systematic review. | Helmi NR. | Front Microbiol | 10.3389/fmicb.2025.1568899 | 2025 | ||
| Diversity and antimicrobial activity of the tropical ant-derived actinomycetes isolated from Thailand. | Tunvongvinis T, Jaitrong W, Samung Y, Tanasupawat S, Phongsopitanun W. | AIMS Microbiol | 10.3934/microbiol.2024005 | 2024 | ||
| Genetics | Genomic Exploration of a Chitinolytic Streptomyces albogriseolus PMB5 Strain from European mantis (Mantis religiosa). | Baev V, Iliev I, Apostolova E, Gozmanova M, Hristova Y, Ilieva Y, Yahubyan G, Gochev V. | Curr Issues Mol Biol | 10.3390/cimb46090554 | 2024 | |
| Exploring the Potential of Halotolerant Actinomycetes from Rann of Kutch, India: A Study on the Synthesis, Characterization, and Biomedical Applications of Silver Nanoparticles. | Dayma P, Choudhary N, Ali D, Alarifi S, Dudhagara P, Luhana K, Yadav VK, Patel A, Patel R. | Pharmaceuticals (Basel) | 10.3390/ph17060743 | 2024 | ||
| Phylogeny | Multiple strain analysis of Streptomyces species from Philippine marine sediments reveals intraspecies heterogeneity in antibiotic activities. | Tenebro CP, Trono DJVL, Vicera CVB, Sabido EM, Ysulat JA, Macaspac AJM, Tampus KA, Fabrigar TAP, Saludes JP, Dalisay DS. | Sci Rep | 10.1038/s41598-021-96886-4 | 2021 | |
| Pathogenicity | Streptomyces-derived actinomycin D inhibits biofilm formation by Staphylococcus aureus and its hemolytic activity. | Lee JH, Kim YG, Lee K, Kim CJ, Park DJ, Ju Y, Lee JC, Wood TK, Lee J. | Biofouling | 10.1080/08927014.2015.1125888 | 2016 | |
| Metabolism | Antimicrobial potential of actinobacteria isolated from the rhizosphere of the Caatinga biome plant Caesalpinia pyramidalis Tul. | Silva-Lacerda GR, Santana RC, Vicalvi-Costa MC, Solidonio EG, Sena KX, Lima GM, Araujo JM. | Genet Mol Res | 10.4238/gmr.15017488 | 2016 | |
| Tracing the function expansion for a primordial protein fold in the era of fold-based function prediction: beta-trefoil | Goswami M, Srinivasan S. | PLoS One | 2025 | |||
| Marine actinobacterium Streptomyces vinaceusdrappus mediated nano-selenium: biosynthesis and biomedical activities. | Ghareeb A, Fouda A, Kishk RM, El Kazzaz WM. | BMC Complement Med Ther | 10.1186/s12906-025-05073-9 | 2025 | ||
| Enzymology | Bio-synthesis, purification and structural analysis of Cyclosporine-A produced by Tolypocladium inflatum with valorization of agro-industrial wastes. | Falah F, Samie A, Mortazavi SA, Danesh A, Yazdi FT, Ramezani M. | Sci Rep | 10.1038/s41598-024-63110-y | 2024 | |
| Biocontrol of strawberry gray mold caused by Botrytis cinerea with the termite associated Streptomyces sp. sdu1201 and actinomycin D. | Yong D, Li Y, Gong K, Yu Y, Zhao S, Duan Q, Ren C, Li A, Fu J, Ni J, Zhang Y, Li R. | Front Microbiol | 10.3389/fmicb.2022.1051730 | 2022 | ||
| Pathogenicity | Manumycin A induces apoptosis in malignant pleural mesothelioma through regulation of Sp1 and activation of the mitochondria-related apoptotic pathway. | Kim KH, Chae JI, Oh H, Cho JH, Lee RH, Yoon G, Cho SS, Cho YS, Lee MH, Liu K, Lee HJ, Shim JH. | Oncol Rep | 10.3892/or.2016.4801 | 2016 | |
| Combined impact of biosynthesized selenium nanoparticles and imipenem against carbapenem-resistant Pseudomonas aeruginosa and their associated virulence factors. | Shawky M, Kalaba MH, El-Sherbiny GM. | BMC Microbiol | 10.1186/s12866-025-03932-6 | 2025 | ||
| Enzymology | CHARACTERIZATION AND BIOCONTROL POTENT OF STREPTOMYCES SP. ISOLATED FROM THE RHIZOSPHERE OF ONONIS ANGUSTISSIMA LAM. | Ghadbane M, Belhadj H, Medjekal S, Harzallah D. | Commun Agric Appl Biol Sci | 2015 | ||
| Metabolism | Occurrence and biosynthesis of C-demethylactinomycins in actinomycin-producing Streptomyces chrysomallus and Streptomyces parvulus. | Crnovcic I, Vater J, Keller U. | J Antibiot (Tokyo) | 10.1038/ja.2012.120 | 2013 | |
| Isolation and characterization of bioactive metabolites producing marine Streptomyces parvulus strain sankarensis-A10. | Shaik M, Girija Sankar G, Iswarya M, Rajitha P. | J Genet Eng Biotechnol | 10.1016/j.jgeb.2017.02.004 | 2017 | ||
| Specific glycine-dependent enzyme motion determines the potency of conformation selective inhibitors of threonyl-tRNA synthetase. | Qiao H, Wang Z, Yang H, Xia M, Yang G, Bai F, Wang J, Fang P. | Commun Biol | 10.1038/s42003-024-06559-x | 2024 | ||
| Genetics | Genomic and Untargeted Metabolomic Analysis of Secondary Metabolites in the Streptomyces griseoaurantiacus Strain MH191 Shows Media-Based Dependency for the Production of Bioactive Compounds with Potential Antifungal Activity. | Ramarajan M, Devilla R, Dow L, Walsh N, Mead O, Zakeel MCM, Gallart M, Richardson AE, Thatcher LF. | J Agric Food Chem | 10.1021/acs.jafc.4c04989 | 2024 | |
| Optimization of Degenerate PCR Conditions for Reducing Error Rates in Detection of PKS and NRPS Gene groups in Actinomycetes. | Ghashghaei S, Etemadifar Z, Tavassoli M, Mofid MR. | Avicenna J Med Biotechnol | 10.18502/ajmb.v15i1.11422 | 2023 | ||
| MALDI-TOF mass spectrometry, an efficient technique for in situ detection and characterization of actinomycins. | Vater J, Crnovcic I, Semsary S, Keller U. | J Mass Spectrom | 10.1002/jms.3329 | 2014 | ||
| Optimization of Fermentation Process for New Anti-Inflammatory Glycosylceramide Metabolite from Aspergillus sp. | Chen YH, Zhu Q, Li J, Yang R, Zhang J, You M, Luo L, Yang B. | Metabolites | 10.3390/metabo14020099 | 2024 | ||
| Experimental and computational methods to highlight behavioural variations in TonB-dependent transporter expression in Pseudomonas aeruginosa versus siderophore concentration. | Hubert T, Madec M, Schalk IJ. | Sci Rep | 10.1038/s41598-023-46585-z | 2023 | ||
| Resistomycin Suppresses Prostate Cancer Cell Growth by Instigating Oxidative Stress, Mitochondrial Apoptosis, and Cell Cycle Arrest. | Aloufi AS, Habotta OA, Abdelfattah MS, Habib MN, Omran MM, Ali SA, Abdel Moneim AE, Korany SM, Alrajhi AM. | Molecules | 10.3390/molecules28237871 | 2023 | ||
| Metabolism | Secondary Metabolite Production Potential of Mangrove-Derived Streptomyces olivaceus. | Hu D, Lee SM, Li K, Mok KM. | Mar Drugs | 10.3390/md19060332 | 2021 | |
| Identification of Compounds Preventing A. fumigatus Biofilm Formation by Inhibition of the Galactosaminogalactan Deacetylase Agd3. | Seegers CII, Lee DJ, Zarnovican P, Kirsch SH, Muller R, Haselhorst T, Routier FH. | Int J Mol Sci | 10.3390/ijms24031851 | 2023 | ||
| Metabolism | Heterologous production of polyketides by modular type I polyketide synthases in Escherichia coli. | Yuzawa S, Kim W, Katz L, Keasling JD. | Curr Opin Biotechnol | 10.1016/j.copbio.2011.12.029 | 2012 | |
| Antimicrobial potential of consolidation polymers loaded with biological copper nanoparticles. | Essa AM, Khallaf MK. | BMC Microbiol | 10.1186/s12866-016-0766-8 | 2016 | ||
| Production and Characterization of Protein Encapsulated Silver Nanoparticles by Marine Isolate Streptomyces parvulus SSNP11. | Prakasham RS, Kumar BS, Kumar YS, Kumar KP. | Indian J Microbiol | 10.1007/s12088-014-0452-1 | 2014 | ||
| Enzymology | Purification and characterization of a major collagenase from Streptomyces parvulus. | Sakurai Y, Inoue H, Nishii W, Takahashi T, Iino Y, Yamamoto M, Takahashi K. | Biosci Biotechnol Biochem | 10.1271/bbb.80357 | 2009 | |
| Enzymology | Screening of Actinomycetes from mangrove ecosystem for L-asparaginase activity and optimization by response surface methodology. | Usha R, Mala KK, Venil CK, Palaniswamy M. | Pol J Microbiol | 10.33073/pjm-2011-030 | 2011 | |
| Metabolism | Screening and quantification of anti-quorum sensing and antibiofilm activity of Actinomycetes isolates against food spoilage biofilm-forming bacteria. | Mulya E, Waturangi DE. | BMC Microbiol | 10.1186/s12866-020-02060-7 | 2021 | |
| The high resolution NMR structure of parvulustat (Z-2685) from Streptomyces parvulus FH-1641: comparison with tendamistat from Streptomyces tendae 4158. | Rehm S, Han S, Hassani I, Sokocevic A, Jonker HR, Engels JW, Schwalbe H. | Chembiochem | 10.1002/cbic.200800547 | 2009 | ||
| Context-dependent activation of p53 target genes and induction of apoptosis by actinomycin D in aerodigestive tract cancers. | Adeluola AA, Bosomtwe N, Long TE, Amin ARMR. | Apoptosis | 10.1007/s10495-022-01720-5 | 2022 | ||
| Inhibition and eradication of Pseudomonas aeruginosa biofilms by secondary metabolites of Nocardiopsis lucentensis EMB25. | Goel N, Ghosh M, Jain D, Sinha R, Khare SK. | RSC Med Chem | 10.1039/d2md00439a | 2023 | ||
| Genetics | Exploring the Potential of Antibiotic Production From Rare Actinobacteria by Whole-Genome Sequencing and Guided MS/MS Analysis. | Hu D, Sun C, Jin T, Fan G, Mok KM, Li K, Lee SM. | Front Microbiol | 10.3389/fmicb.2020.01540 | 2020 | |
| A review on the screening methods for the discovery of natural antimicrobial peptides. | Yang B, Yang H, Liang J, Chen J, Wang C, Wang Y, Wang J, Luo W, Deng T, Guo J. | J Pharm Anal | 10.1016/j.jpha.2024.101046 | 2025 | ||
| Biological and Chemical Diversity of Bacteria Associated with a Marine Flatworm. | Lin HN, Wang KL, Wu ZH, Tian RM, Liu GZ, Xu Y. | Mar Drugs | 10.3390/md15090281 | 2017 | ||
| Antagonistic Potentiality of Actinomycete-Derived Extract with Anti-Biofilm, Antioxidant, and Cytotoxic Capabilities as a Natural Combating Strategy for Multidrug-Resistant ESKAPE Pathogens. | El-Sayed MH, Alshammari FA, Sharaf MH. | J Microbiol Biotechnol | 10.4014/jmb.2211.11026 | 2023 | ||
| In-Silico targeting of SARS-CoV-2 NSP6 for drug and natural products repurposing. | Abdelkader A, Elzemrany AA, El-Nadi M, Elsabbagh SA, Shehata MA, Eldehna WM, El-Hadidi M, Ibrahim TM. | Virology | 10.1016/j.virol.2022.06.008 | 2022 | ||
| Genetics | Potentiality of Actinomycetia Prevalent in Selected Forest Ecosystems in Assam, India to Combat Multi-Drug-Resistant Microbial Pathogens. | Mazumdar R, Saikia K, Thakur D. | Metabolites | 10.3390/metabo13080911 | 2023 | |
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| Phylogeny | Discovery of two new actinobacteria, Micromonospora palythoicola sp. nov. and Streptomyces poriticola sp. nov., isolated from marine invertebrates. | Kanchanasin P, Salahong T, Sripreechasak P, Suriyachadkun C, Harunari E, Igarashi Y, Tanasupawat S, Tawinwung S, Vimolmangkang S, Chaotham C, Phongsopitanun W. | Sci Rep | 10.1038/s41598-024-73040-4 | 2024 | |
| Phenotypic and Genomic Characterization of Streptomyces pakalii sp. nov., a Novel Species with Anti-Biofilm and Anti-Quorum Sensing Activity in ESKAPE Bacteria. | Chavez-Hernandez M, Ortiz-Alvarez J, Morales-Jimenez J, Villa-Tanaca L, Hernandez-Rodriguez C. | Microorganisms | 10.3390/microorganisms11102551 | 2023 | ||
| New bioactive metabolites from the elicited marine sponge-derived bacterium Actinokineospora spheciospongiae sp. nov. | Tawfike A, Attia EZ, Desoukey SY, Hajjar D, Makki AA, Schupp PJ, Edrada-Ebel R, Abdelmohsen UR. | AMB Express | 10.1186/s13568-018-0730-0 | 2019 | ||
| Halomonas gemina sp. nov. and Halomonas llamarensis sp. nov., two siderophore-producing organisms isolated from high-altitude salars of the Atacama Desert. | Hintersatz C, Singh S, Rojas LA, Kretzschmar J, Wei ST, Khambhati K, Kutschke S, Lehmann F, Singh V, Jain R, Pollmann K. | Front Microbiol | 10.3389/fmicb.2023.1194916 | 2023 | ||
| Phylogeny | Streptomyces hyderabadensis sp. nov., an actinomycete isolated from soil. | Reddy TVK, Mahmood S, Paris L, Reddy YHK, Wellington EMH, Idris MM | Int J Syst Evol Microbiol | 10.1099/ijs.0.020446-0 | 2010 |
| #9126 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40048 |
| #18473 | Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig . |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20216 | Curators of the JMRC: Jena Microbial Resource Collection (JMRC): |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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https://doi.org/10.13145/bacdive15454.20260601.11
When using BacDive for research please cite the following paper
BacDive in 2025: the core database for prokaryotic strain data