Name: Streptomyces hirsutus DSM 40095
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 15306

Type strain:

Species: Streptomyces hirsutus

Culture col. no.: DSM 40095, ATCC 19773, CBS 511.68, ETH 16660, IFO 12786, ISP 5095, NBRC 12786, NRRL B-2713, RIA 1053, JCM 4191, BCRC 13676, CGMCC 4.1950, HAMBI 1003, IMET 42054, JCM 4587, NRRL ISP-5095, VKM Ac-623

Strain history: KCC S-0191 <-- ETH 16660.

NCBI tax ID(s): 35620 (species)

SI-ID 45634

ATCC 19773, IFO 12786, DSM 40095, JCM 4191, CCRC 13676, IMET 42054, NRRL B-2713, VKM Ac-623, JCM 4587, CBS 511.68, NBRC 12786, BCRC 13676, HAMBI 1003, CGMCC 4.1950

Other strains from Streptomyces hirsutus

S. hirsutus DSM 40198, ATCC 15859, ATCC 23902, ...

Section

Streptomyces hirsutus DSM 40095 is a spore-forming, mesophilic bacterium that builds an aerial mycelium and was isolated from soil.

spore-forming
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Kitasatosporales*
	Family	*Streptomycetaceae*
	Genus	*Streptomyces*
	Species	**Streptomyces hirsutus**
	Full Scientific Name (LPSN)	Streptomyces hirsutus Ettlinger et al. 1958 (Approved Lists 1980)

	Synonym	"Actinomyces* cyanoalbus"*
	Synonym	Streptomyces cyanoalbus

Information on morphological and physiological properties Morphology

[Ref.: #19402]	Incubation period	10-14 days
[Ref.: #19402]	Cultivation medium used	ISP 2

[Ref.: #19402]	Incubation period	10-14 days
[Ref.: #19402]	Cultivation medium used	ISP 3

[Ref.: #19402]	Incubation period	10-14 days
[Ref.: #19402]	Cultivation medium used	ISP 4

[Ref.: #19402]	Incubation period	10-14 days
[Ref.: #19402]	Cultivation medium used	ISP 5

[Ref.: #19402]	Incubation period	10-14 days
[Ref.: #19402]	Cultivation medium used	ISP 6

[Ref.: #19402]	Incubation period	10-14 days
[Ref.: #19402]	Cultivation medium used	ISP 7

[Ref.: #19402]	Multicellular complex forming ability	yes
[Ref.: #19402]	Multicellular complex name	Aerial Mycelium
[Ref.: #19402]	Multicellular complex color	Reed green
[Ref.: #19402]	Medium Name (multicellularity)	ISP 2

[Ref.: #19402]	Multicellular complex forming ability	yes
[Ref.: #19402]	Multicellular complex name	Aerial Mycelium
[Ref.: #19402]	Multicellular complex color	Reed green
[Ref.: #19402]	Medium Name (multicellularity)	ISP 3

[Ref.: #19402]	Multicellular complex forming ability	yes
[Ref.: #19402]	Multicellular complex name	Aerial Mycelium
[Ref.: #19402]	Multicellular complex color	White
[Ref.: #19402]	Medium Name (multicellularity)	ISP 4

[Ref.: #19402]	Multicellular complex forming ability	yes
[Ref.: #19402]	Multicellular complex name	Aerial Mycelium
[Ref.: #19402]	Multicellular complex color	Reed green
[Ref.: #19402]	Medium Name (multicellularity)	ISP 5

[Ref.: #19402]	Multicellular complex forming ability	no
[Ref.: #19402]	Medium Name (multicellularity)	ISP 6

[Ref.: #19402]	Multicellular complex forming ability	yes
[Ref.: #19402]	Multicellular complex name	Aerial Mycelium
[Ref.: #19402]	Multicellular complex color	Reed green
[Ref.: #19402]	Medium Name (multicellularity)	ISP 7

Information on culture and growth conditions Culture and growth conditions

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Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

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Culture medium

ISP 2

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Culture medium growth

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Culture medium composition

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Culture medium

ISP 3

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Culture medium growth

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Culture medium composition

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Culture medium

ISP 4

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Culture medium growth

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Culture medium composition

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Culture medium

ISP 5

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Culture medium growth

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Culture medium composition

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Culture medium

ISP 6

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Culture medium growth

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Culture medium composition

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Culture medium

ISP 7

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Culture medium growth

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Culture medium composition

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Culture medium

ISP 5 MEDIUM (DSMZ Medium 993)

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Culture medium growth

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Culture medium link

Medium recipe provided by DSMZ

		Temperature
[Ref.: #9307]	growth	28 °C
[Ref.: #19402]	optimum	28 °C
[Ref.: #67770]	growth	28 °C

[Ref.: #9307]	Temperature range	mesophilic
[Ref.: #19402]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #19402]	Spore description	Formation of spore chains: retinaculiapetri, spore surface: smooth
[Ref.: #19402]	Ability of spore formation	yes

[Ref.: #67770]

Observation

quinones: MK-9(H₈), MK-9(H₆)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68368]	arginine ChEBI	-	hydrolysis	* from API 20E
[Ref.: #68368]	citrate ChEBI	-	assimilation	* from API 20E
[Ref.: #68368]	D-glucose ChEBI	+	fermentation	* from API 20E
[Ref.: #68368]	gelatin ChEBI	-	hydrolysis	* from API 20E
[Ref.: #68368]	lysine ChEBI	-	degradation	* from API 20E
[Ref.: #68368]	ornithine ChEBI	-	degradation	* from API 20E
[Ref.: #68368]	tryptophan ChEBI	-	energy source	* from API 20E
[Ref.: #68368]	urea ChEBI	-	hydrolysis	* from API 20E

	Metabolite	Production
[Ref.: #68368]	acetoin ChEBI	yes	* from API 20E
[Ref.: #68368]	hydrogen sulfide ChEBI	no	* from API 20E
[Ref.: #68368]	indole ChEBI	no	* from API 20E

	Physiological tests	Metabolite	Voges-Proskauer-test	Indole test
[Ref.: #68368]		acetoin ChEBI	+		* from API 20E
[Ref.: #68368]		indole ChEBI		-	* from API 20E

	Enzyme	Enzyme activity	EC number
[Ref.: #68368]	arginine dihydrolase	-	3.5.3.6	* from API 20E
[Ref.: #68368]	beta-galactosidase	-	3.2.1.23	* from API 20E
[Ref.: #68368]	gelatinase	-		* from API 20E
[Ref.: #68368]	lysine decarboxylase	-	4.1.1.18	* from API 20E
[Ref.: #68368]	ornithine decarboxylase	-	4.1.1.17	* from API 20E
[Ref.: #68368]	tryptophan deaminase	-	4.1.99.1	* from API 20E
[Ref.: #68368]	urease	-	3.5.1.5	* from API 20E

API® 20E:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	beta-GalactosidaseONPG	Arginine dihydrolaseADH (Arg)	Lysine decarboxylaseLDC (Lys)	Ornithine decarboxylaseODC	Citrate utilizationCIT	H2S productionH2S	Urease/urea hydrolysisURE	Tryptophan deaminaseTDA (Trp)	Indole productionIND	Acetoin production (Voges Proskauer test)VP	Gelatinase/gelatin hydrolysisGEL	Fermentation/oxidation of D-glucoseGLU	Fermentation/oxidation of D-mannitolMAN	Fermentation/oxidation of inositolINO	Fermentation/oxidation of sorbitolSor	Fermentation/oxidation of L-rhamnoseRHA	Fermentation/oxidation of sucroseSAC	Fermentation/oxidation of melibioseMEL	Fermentation/oxidation of amygdalinAMY	Fermentation/oxidation of L-arabinoseARA	Cytochrome oxidaseOX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	Oxidative catabolisation of D-glucoseOF-O	Fermentation of D-glucoseOF-F
[Ref.: #19402]	268	-	-	-	-	-	-	-	-	-	+	-	+	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #9307]	Sample type/isolated from	soil
[Ref.: #9307]	Country	Switzerland
[Ref.: #9307]	Country ISO 3 Code	CHE
[Ref.: #9307]	Continent	Europe

[Ref.: #67770]	Sample type/isolated from	Soil
[Ref.: #67770]	Geographic location (country and/or sea, region)	Bergün, Kt. Graubünden
[Ref.: #67770]	Country	Switzerland
[Ref.: #67770]	Country ISO 3 Code	CHE
[Ref.: #67770]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #9307]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #19402]	Biosafety level	1	Risk group (German classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #9307]	Streptomyces hirsutus strain NRRL B-2713T 16S ribosomal RNA gene, partial sequence	DQ442506	1431	ENA	35620 tax ID
[Ref.: #20218]	Streptomyces hirsutus gene for 16S ribosomal RNA, partial sequence, strain: JCM 4587	D44249	120	ENA	35620 tax ID	*
[Ref.: #20218]	Streptomyces hirsutus gene for 16S rRNA, partial sequence, strain: NBRC 12786	AB184844	1480	ENA	35620 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Streptomyces hirsutus NRRL B-2713	GCA_001418415	scaffold	GenBank	35620 tax ID

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Streptomyces hirsutus NRRL B-2713 NCBI: GCA_001418415.1
[Ref.: #69480]	flagellated	no	97.655	no
[Ref.: #69480]	gram-positive	yes	90.557	no
[Ref.: #69480]	anaerobic	no	98.896	no
[Ref.: #69480]	aerobic	yes	91.989	no
[Ref.: #69480]	halophile	no	91.13	no
[Ref.: #69480]	spore-forming	yes	95.411	no
[Ref.: #69480]	glucose-util	yes	90.699	no
[Ref.: #69480]	thermophile	no	97.484	yes
[Ref.: #69480]	motile	no	94.427	no
[Ref.: #69480]	glucose-ferment	no	84.682	yes

Availability in culture collections External links

[Ref.: #9307]

Culture collection no.

DSM 40095, ATCC 19773, CBS 511.68, ETH 16660, IFO 12786, ISP 5095, NBRC 12786, NRRL B-2713, RIA 1053, JCM 4191, BCRC 13676, CGMCC 4.1950, HAMBI 1003, IMET 42054, JCM 4587, NRRL ISP-5095, VKM Ac-623

[Ref.: #84400]

SI-ID 45634

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Streptomyces emeiensis sp. nov., a novel streptomycete from soil in China.	Sun W, Huang Y, Zhang YQ, Liu ZH	Int J Syst Evol Microbiol	10.1099/ijs.0.64934-0	2007	*

References

#9307

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40095

#19402

Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68368

Automatically annotated from API 20E .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#84400

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID45634.1 )

* These data were automatically processed and therefore are not curated

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Streptomyces hirsutus NRRL B-2713

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