Name: Streptomyces canarius DSM 40528
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 15064

Type strain:

Species: Streptomyces canarius

Culture col. no.: DSM 40528, ATCC 27423, CBS 732.72, IFO 13431, ISP 5528, NBRC 13431, NRRL 2976, RIA 1392, UC 2591, JCM 4549, BCRC 11621, CGMCC 4.1581, HAMBI 1014, IMET 43539, JCM 4733, NCIMB 9468

Strain history: KCC S-0549 <-- NRRL 2976.

NCBI tax ID(s): 285453 (species)

SI-ID 36145

ATCC 27423, IFO 13431, NRRL 2976, DSM 40528, JCM 4549, CCRC 11621, IMET 43539, NCIMB 9468, JCM 4733, CBS 732.72, AS 4.1581, NBRC 13431, BCRC 11621, HAMBI 1014, CGMCC 4.1581

Special Collections

DSMZ
JCM

Other strains from Streptomyces canarius

Section

Streptomyces canarius DSM 40528 is a spore-forming bacterium that was isolated from Soil.

spore-forming
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Kitasatosporales*
	Family	*Streptomycetaceae*
	Genus	*Streptomyces*
	Species	**Streptomyces canarius**
	Full Scientific Name (LPSN)	Streptomyces canarius Vavra and Dietz 1965 (Approved Lists 1980)

Information on culture and growth conditions Culture and growth conditions

[Ref.: #9617]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

[Ref.: #9617]

Culture medium growth

[Ref.: #9617]

Culture medium link

Medium recipe at MediaDive

[Ref.: #9617]

Culture medium composition

expand / minimize

[Ref.: #9617]

Culture medium

ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)

[Ref.: #9617]

Culture medium growth

[Ref.: #9617]

Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #9617]			growth	28 °C
[Ref.: #67770]			growth	28 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]

Oxygen tolerance

aerobe Confidence in %92.184

[Ref.: #69480]	Ability of spore formation	yes Confidence in %91.496
[Ref.: #69481]	Ability of spore formation	yes Confidence in %100

[Ref.: #9617]	Name of produced compound	canarius (U-13, 714)
[Ref.: #20216]	Name of produced compound	Canarius (U-13,714)

	Metabolite production	Metabolite	Production
[Ref.: #67770]		canarius	yes

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Soil
* marker position based on {}

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #9617]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Streptomyces canarius gene for 16S rRNA, partial sequence, strain: NBRC 13431	AB184396	1477	GenBank ENA	285453 tax ID	*
[Ref.: #20218]	Streptomyces canarius strain NRRL 2976 16S ribosomal RNA gene, partial sequence	AY999906	1318	GenBank ENA	285453 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Streptomyces canarius JCM 4733	GCA_014650735	scaffold	GenBank ENA	285453 tax ID	*
[Ref.: #66792]	Streptomyces canarius strain JCM 4733	285453.3	wgs	PATRIC	285453 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Streptomyces canarius JCM 4733 NCBI: GCA_014650735.1
[Ref.: #69481]	spore-forming	spore-formingⓘ	yes	100	no

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Streptomyces canarius JCM 4733 NCBI: GCA_014650735.1
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	88.025	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	96.574	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	92.184	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	yes	91.496	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	96.5	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	no	88	no

Availability in culture collections External links

[Ref.: #9617]

Culture collection no.

DSM 40528, ATCC 27423, CBS 732.72, IFO 13431, ISP 5528, NBRC 13431, NRRL 2976, RIA 1392, UC 2591, JCM 4549, BCRC 11621, CGMCC 4.1581, HAMBI 1014, IMET 43539, JCM 4733, NCIMB 9468

[Ref.: #84170]

SI-ID 36145

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Streptomyces monashensis sp. nov., a novel mangrove soil actinobacterium from East Malaysia with antioxidative potential.	Law JW, Ser HL, Ab Mutalib NS, Saokaew S, Duangjai A, Khan TM, Chan KG, Goh BH, Lee LH	Sci Rep	10.1038/s41598-019-39592-6	2019	*

References

#9617

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40528

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20216

Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. Hans-Knöll-Institut (HKI) Curators of the HKI: Collection Description Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. Hans-Knöll-Institut (HKI) .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#84170

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID36145.1 )

* These data were automatically processed and therefore are not curated

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Streptomyces canarius JCM 4733

Streptomyces canarius JCM 4733

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