Cite this strain

Deinococcus sp. (CCUG 38674)

Name: Deinococcus sp. (CCUG 38674)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 149917

Type strain

Culture col. no. CCUG 38674

NCBI tax ID(s) 47478

Special Collections CCUG

Links

CCUG 38674 is a prokaryote that was isolated from Human blood.

Name and taxonomic classification

SI-ID 52835

CCUG 38674

@ref 20215

Last LPSN update 2025-12-16 10:05:58

Domain Thermotogati

Phylum Deinococcota

Class Deinococci

Order Deinococcales

Family Deinococcaceae

Genus Deinococcus

Full scientific name Deinococcus Brooks and Murray 1981

Synonyms (1)

Deinobacter

Morphology

Culture and growth conditions

Physiology and metabolism

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68379	17634 ChEBI	D-glucose	+	fermentation	from API Coryne
68379	16899 ChEBI	D-mannitol	-	fermentation	from API Coryne
68379	16988 ChEBI	D-ribose	-	fermentation	from API Coryne
68379	65327 ChEBI	D-xylose	-	fermentation	from API Coryne
68379	4853 ChEBI	esculin	+	hydrolysis	from API Coryne
68379	5291 ChEBI	gelatin	+	hydrolysis	from API Coryne
68379	28087 ChEBI	glycogen	-	fermentation	from API Coryne
68379	17716 ChEBI	lactose	-	fermentation	from API Coryne
68379	17306 ChEBI	maltose	-	fermentation	from API Coryne
68379	17632 ChEBI	nitrate	+	reduction	from API Coryne
68379	17992 ChEBI	sucrose	-	fermentation	from API Coryne
68379	16199 ChEBI	urea	-	hydrolysis	from API Coryne

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68379	alkaline phosphatase	+	3.1.3.1	from API Coryne
68382	alpha-chymotrypsin	+	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68379	alpha-glucosidase	+	3.2.1.20	from API Coryne
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68382	beta-galactosidase	-	3.2.1.23	from API zym
68379	beta-galactosidase	+	3.2.1.23	from API Coryne
68382	beta-glucosidase	+	3.2.1.21	from API zym
68379	beta-glucosidase	+	3.2.1.21	from API Coryne
68382	beta-glucuronidase	-	3.2.1.31	from API zym
68379	beta-glucuronidase	-	3.2.1.31	from API Coryne
68379	catalase	+	1.11.1.6	from API Coryne
68382	cystine arylamidase	-	3.4.11.3	from API zym
68382	esterase (C 4)	-		from API zym
68382	esterase lipase (C 8)	+		from API zym
68379	gelatinase	+		from API Coryne
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68379	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API Coryne
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
68379	pyrazinamidase	-	3.5.1.B15	from API Coryne
68379	pyrrolidonyl arylamidase	+	3.4.19.3	from API Coryne
68382	trypsin	-	3.4.21.4	from API zym
68379	urease	-	3.5.1.5	from API Coryne
68382	valine arylamidase	-		from API zym

Fatty acid profile

Metadata FA analysis

@ref

54390

Fatty acid	Percentage	ECL
C16:1 ω7c	20.7	15.819
C17:1 ω8c	19.2	16.792
C17:1 ω9c ISO	13.5	16.416
C15:1 ω6c	8.2	14.856
C16:0	6.8	16
C17:0 iso	4.6	16.629
C15:0	4.2	15
C17:1 ω6c	4	16.862
C16:1 ω9c	3.8	15.774
C17:0	3.8	17
C15:1 ω8c	3	14.792
C15:0 ISO	1.7	14.621
C18:1 ω9c	1.4	17.769
C18:2 ω6,9c/C18:0 ANTE	1.1	17.724
C16:0 iso	0.9	15.626
C18:1 ω7c /12t/9t	0.9	17.824
C16:1 ISO H	0.7	15.461
C15:1 ISO F	0.5	14.414
Unidentified	0.5	16.185
unknown 12.555	0.5	12.555

Metadata FA analysis

@ref

54390

Fatty acid	Percentage	ECL
C17:1 ω8c	22.7	16.792
C16:1 ω7c	17.3	15.819
C17:1 ω9c ISO	12.4	16.416
C15:1 ω6c	8.9	14.856
C16:0	5.2	16
C17:0 iso	3.9	16.629
C15:0	3.9	15
C17:1 ω6c	3.8	16.862
C15:1 ω8c	3.7	14.792
C16:1 ω9c	3.5	15.774
C17:0	3.4	17
C15:0 ISO	1.5	14.621
C16:0 iso	1.5	15.626
C18:1 ω9c	1.4	17.769
C16:1 ISO H	1.2	15.461
C18:2 ω6,9c/C18:0 ANTE	1.1	17.724
unknown 12.555	1	12.555
C17:1 ISO I/C16:0 DMA	0.6	16.481
C18:1 ω7c /12t/9t	0.6	17.824
C18:1 ISO H	0.5	17.46
C15:1 ISO F	0.4	14.414
Unidentified	0.3	18.795
C18:0	0.3	18
C11:0 iso	0.2	10.605
C17:0 10-methyl	0.2	17.41
C14:0 ANTEISO	0.2	13.707
C16:0 anteiso	0.2	15.717
C14:0	0.2	14

API coryne

@ref	Reduction of nitrateNIT	PYZ	PYRA	PAL	beta GUR	beta GAL	alpha GLU	beta NAG	ESC	URE	GEL	Control fermentationControl	GLU	RIB	XYL	MAN	MAL	LAC	SAC	GLYG	CAT
54390	+	-	+	+	-	+	+	-	+	-	+	-	+	-	-	-	-	-	-	-	+

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
54390	-	+	-	+	-	+	-	-	-	+	+	+	-	-	-	+	+	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Human	-
#Host Body Product	#Fluids	#Blood

Isolation

@ref	Sample type	Sampling date	Geographic location	Country	Country ISO 3 Code	Continent
54390	Human blood	1997-10-01	Gävle	Sweden	SWE	Europe

Interaction and safety

Sequence information

Genome-based predictions

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#54390	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 38674
#68379	Automatically annotated from API Coryne .
#68382	Automatically annotated from API zym .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Deinococcus sp. (CCUG 38674)

Name and taxonomic classification

Morphology

Culture and growth conditions