[Ref.: #15843] |
Sample type/isolated from |
Field soil |
[Ref.: #15843] |
Geographic location (country and/or sea, region) |
Kakegawa, Shizuoka |
[Ref.: #15843] |
Country |
Japan |
[Ref.: #15843] |
Country ISO 3 Code |
JPN |
[Ref.: #15843] |
Continent |
Asia |
|
[Ref.: #67770] |
Sample type/isolated from |
Field soil in Kakegawa |
[Ref.: #67770] |
Geographic location (country and/or sea, region) |
Shizuoka |
[Ref.: #67770] |
Country |
Japan |
[Ref.: #67770] |
Country ISO 3 Code |
JPN |
[Ref.: #67770] |
Continent |
Asia |
|
[Ref.: #67771] |
Sample type/isolated from |
From field soil |
[Ref.: #67771] |
Geographic location (country and/or sea, region) |
Kakegawa, Shizuoka |
[Ref.: #67771] |
Country |
Japan |
[Ref.: #67771] |
Country ISO 3 Code |
JPN |
[Ref.: #67771] |
Continent |
Asia |
|
[Ref.: #119821] |
Sample type/isolated from |
Environment, Soil |
[Ref.: #119821] |
Geographic location (country and/or sea, region) |
Kakegawa, Shizuoka |
[Ref.: #119821] |
Country |
Japan |
[Ref.: #119821] |
Country ISO 3 Code |
JPN |
[Ref.: #119821] |
Continent |
Asia |
|
[Ref.: #23055] |
Enrichment culture |
plate count agar (Merck) |
[Ref.: #23055] |
Enrichment culture temperature |
35.0 ̊C |
* marker position based on {}
|
|
Isolation sources categories |
#Engineered |
#Agriculture |
#Field |
#Environmental |
#Terrestrial |
#Soil |
|
|
-
Information on genomic background e.g. entries in nucleic sequence databass Sequence information
|
16S Sequence information: |
|
|
Sequence accession description |
Seq. accession number |
Sequence length (bp) |
Sequence database |
Associated NCBI tax ID |
|
[Ref.: #15843] |
Virgibacillus halophilus rrs gene for 16S rRNA, partial sequence |
AB243851 |
1519 |
|
361280 tax ID |
[Ref.: #20218] |
Virgibacillus halophilus genes for 16S ribosomal RNA, internal transcribed spacer 1 and 23S ribosomal RNA, partial and complete sequence, clone: 524 |
AB367179 |
524 |
|
361280 tax ID |
* |
[Ref.: #20218] |
Virgibacillus halophilus genes for 16S ribosomal RNA, internal transcribed spacer 1 and 23S ribosomal RNA, partial and complete sequence, clone: 644 |
AB367180 |
644 |
|
361280 tax ID |
* |
[Ref.: #20218] |
Virgibacillus halophilus genes for 16S ribosomal RNA, internal transcribed spacer 1 and 23S ribosomal RNA, partial and complete sequence, clone: 724 |
AB367181 |
724 |
|
361280 tax ID |
* |
|
|
-
Availability in culture collections External links
[Ref.: #15843] |
Culture collection no. |
DSM 21623, IAM 15308, JCM 21758, KCTC 13935, CIP 109671 |
[Ref.: #71129] |
SI-ID 309509
|
* |
|
Literature: |
|
Topic |
Title |
Authors |
Journal |
DOI |
Year |
|
Phylogeny |
Virgibacillus halophilus sp. nov., spore-forming bacteria isolated from soil in Japan. |
An SY, Asahara M, Goto K, Kasai H, Yokota A |
Int J Syst Evol Microbiol |
10.1099/ijs.0.64307-0 |
2007 |
* |
|
- References
-
#15843 |
Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ;
DSM 21623
|
-
-
-
-
#36827 |
; Curators of the CIP;
|
-
#67770 |
Japan Collection of Microorganism (JCM) ; Curators of the JCM;
|
-
#67771 |
Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;
|
-
#68371 |
Automatically annotated from API 50CH acid .
|
-
#68382 |
Automatically annotated from API zym .
|
-
#69479 |
João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.:
MicrobeAtlas 1.0 beta
.
|
-
#71129 |
Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.:
StrainInfo: A central database for resolving microbial strain identifiers
.
(
DOI 10.60712/SI-ID309509.1 )
|
-
#119821 |
Collection of Institut Pasteur ; Curators of the CIP;
CIP 109671
|
- * These data were automatically processed and therefore are not curated
Change proposal
Successfully sent
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