Information on genomic background e.g. entries in nucleic sequence databass Sequence information
16S Sequence information:
Sequence accession description
Seq. accession number
Sequence length (bp)
Sequence database
Associated NCBI tax ID
[Ref.: #20218]
Virgibacillus pantothenticus clone BPANTO-1R 16S ribosomal RNA gene, partial sequence; 16S-23S internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence
AF478073
651
1473 tax ID
*
[Ref.: #20218]
Virgibacillus pantothenticus isolate Vpa1 16S ribosomal RNA gene, partial sequence; 16S-23S internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence
EU723672
651
1473 tax ID
*
[Ref.: #67770]
Virgibacillus pantothenticus gene for 16S rRNA, partial sequence, strain: NBRC 102447
AB681789
1490
1473 tax ID
[Ref.: #67770]
Virgibacillus pantothenticus gene for 16S rRNA, partial sequence, strain: IAM 11061
D16275
1491
1473 tax ID
[Ref.: #67770]
Bacillus pantothenticus DNA for 16S ribosomal RNA, partial sequence
D78477
1448
1473 tax ID
Genome sequence information:
Sequence accession description
Seq. accession number
Assembly level (bp)
Sequence database
Associated NCBI tax ID
[Ref.: #67770]
Virgibacillus pantothenticus DSM 26
GCA_900156795
scaffold
1473 tax ID
[Ref.: #67770]
Virgibacillus pantothenticus DSM 26
GCA_001189575
scaffold
1473 tax ID
Availability in culture collections External links
[Ref.: #2027]
Culture collection no.
DSM 26 , ATCC 14576 , CCM 2049 , LMG 7129 , NCIB 8775, NCTC 8162 , CCUG 7424 , CIP 51.24 , IAM 11061, CN 3028, NRS B21, JCM 20334 , BCRC 14681 , CCEB 635, CECT 42 , NBRC 102447 , NCAIM B.01092, NCFB 1765, NCIMB 8775, NRRL NRS-1321, OUT 8418, PCM 454, VKM B-1244 , VKM B-507
[Ref.: #20218]
Associated Passport(s) in StrainInfo
51887 , 51880 , 51882 , 51879 , 51891 , 51892
Literature:
Topic
Title
Authors
Journal
DOI
Year
Phylogeny
Virgibacillus salarius sp. nov., a halophilic bacterium isolated from a Saharan salt lake.
Hua NP, Hamza-Chaffai A, Vreeland RH, Isoda H, Naganuma T
Int J Syst Evol Microbiol
10.1099/ijs.0.65693-0
2008
*
Genetics
Genome Sequence of Virgibacillus pantothenticus DSM 26T (ATCC 14576), a Mesophilic and Halotolerant Bacterium Isolated from Soil.
Wang JP, Liu B, Liu GH, Chen DJ, Zhu YJ, Chen Z, Che JM
Genome Announc
10.1128/genomeA.01064-15
2015
*
References
#2027
Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ;
DSM 26
#38435
; Curators of the CIP;
#44993
Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG;
CCUG 7424
#66794
Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg:
BRENDA, the ELIXIR core data resource in 2021: new developments and updates.
Nucleic Acids Res. 49:
D498 - D508
2020 (
DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
#67770
Japan Collection of Microorganism (JCM) ; Curators of the JCM;
* These data were automatically processed and therefore are not curated
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