Name: Francisella tularensis subsp. novicida CCUG 33449
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 147362

Type strain:

Species: Francisella tularensis subsp. novicida

Culture col. no.: CCUG 33449, CAPM 6041, ATCC 15482, CIP 56.12

NCBI tax ID(s): 264 (subspecies)

SI-ID 389304

CCUG 33449, ATCC 15482, CIP 56.12, CCM 6041

Special Collections

CCUG
CIP

Section

Francisella tularensis subsp. novicida CCUG 33449 is a Gram-negative bacterium that was isolated from Water.

Gram-negative
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Beggiatoales*
	Family	*Francisellaceae*
	Genus	*Francisella*
	Species	**Francisella tularensis subsp. novicida**
	Full Scientific Name (LPSN)	Francisella tularensis subsp. novicida (Larson et al. 1955) Huber et al. 2010

	Synonym	"Pasteurella* novicida"*
	Synonym	Francisella novicida

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %95

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]

Ability of spore formation

no Confidence in %90.009

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #51526]	Sample type/isolated from	Water
[Ref.: #51526]	Sampling date	1951
[Ref.: #51526]	Geographic location (country and/or sea, region)	Utah
[Ref.: #51526]	Country	USA
[Ref.: #51526]	Country ISO 3 Code	USA
[Ref.: #51526]	Continent	North America
* marker position based on {}

Isolation sources categories

#Environmental

#Aquatic

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #124043]	F.novicida (ATCC 15482) 16S rRNA (partial)	Z22916	265	GenBank ENA	264 tax ID	*
[Ref.: #124043]	F.novicida (ATCC 15482) 16S rRNA (partial)	Z22917	264	GenBank ENA	264 tax ID	*
[Ref.: #124043]	Francisella novicida strain CIP 56.12 16S ribosomal RNA gene, partial sequence.	AY928396	1520	GenBank ENA	264 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Francisella tularensis ATCC 15482	GCA_009815755	contig	GenBank ENA	263 tax ID	*
[Ref.: #66792]	Francisella tularensis strain ATCC 15482	263.357	wgs	PATRIC	263 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Francisella tularensis strain ATCC 15482 PATRIC: 263.357
[Ref.: #69480]	gram-positive	gram-positiveⓘ	no	95	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	90.485	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	90.009	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	60.358	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	95.163	no
[Ref.: #69480]	flagellated	motile2+ⓘ	no	76.918	no

Availability in culture collections External links

[Ref.: #51526]

Culture collection no.

CCUG 33449, CAPM 6041, ATCC 15482, CIP 56.12

[Ref.: #102084]

SI-ID 389304

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Description of Francisella hispaniensis sp. nov., isolated from human blood, reclassification of Francisella novicida (Larson et al. 1955) Olsufiev et al. 1959 as Francisella tularensis subsp. novicida comb. nov. and emended description of the genus Francisella.	Huber B, Escudero R, Busse HJ, Seibold E, Scholz HC, Anda P, Kampfer P, Splettstoesser WD	Int J Syst Evol Microbiol	10.1099/ijs.0.015941-0	2009	*
Phylogeny	Reclassification of Wolbachia persica as Francisella persica comb. nov. and emended description of the family Francisellaceae.	Larson MA, Nalbantoglu U, Sayood K, Zentz EB, Cer RZ, Iwen PC, Francesconi SC, Bishop-Lilly KA, Mokashi VP, Sjostedt A, Hinrichs SH	Int J Syst Evol Microbiol	10.1099/ijsem.0.000855	2016	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#51526 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 33449

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#102084

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID389304.1 )

#124043

Dr. Isabel Schober, Dr. Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .

* These data were automatically processed and therefore are not curated

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Francisella tularensis strain ATCC 15482

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