Name: Streptococcus iniae PW
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 14731

Type strain:

Species: Streptococcus iniae

Strain Designation: PW

Culture col. no.: CCUG 27303, LMG 14520, DSM 20576, ATCC 29178, CECT 7363, CIP 102508

Strain history: <- ATCC; ATCC 29178 <- G. B. Pier and S. H. Madin; PW

NCBI tax ID(s): 1346 (species)

Other strains from Streptococcus iniae

S. iniae CIP 105804, ATCC 29177, CCUG 27623, ...
S. iniae CIP 103769, ATCC 51499
S. iniae CCUG 44699
S. iniae CCUG 47768
S. iniae CCUG 47769
S. iniae CCUG 47770
S. iniae CCUG 47771
S. iniae CCUG 47772
S. iniae CCUG 47773
S. iniae CCUG 47774

Section

Streptococcus iniae PW is a microaerophile, mesophilic bacterium that was isolated from abscess of amazon fresh water dolphin .

mesophilic
microaerophile
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	07-12-2022 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Lactobacillales*
	Family	*Streptococcaceae*
	Genus	*Streptococcus*
	Species	**Streptococcus iniae**
	Full Scientific Name (PNU)	Streptococcus iniae Pier and Madin 1976 (Approved Lists 1980)

Synonym

Streptococcus shiloi

Information on morphological and physiological properties Morphology

[Ref.: #8926]	Type of hemolysis	beta
[Ref.: #8926]	Incubation period	1-2 days

Information on culture and growth conditions Culture and growth conditions

[Ref.: #8926]

Culture medium

COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)

[Ref.: #8926]

Culture medium growth

[Ref.: #8926]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #8926]

Culture medium composition

expand / minimize

[Ref.: #8926]

Culture medium

TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)

[Ref.: #8926]

Culture medium growth

[Ref.: #8926]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #8926]

Culture medium composition

expand / minimize

[Ref.: #38975]

Culture medium

MEDIUM 6 - Columbia agar with 10 % horse blood

[Ref.: #38975]

Culture medium growth

[Ref.: #38975]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #8926]	growth	37 °C
[Ref.: #38975]	growth	37 °C
[Ref.: #48710]	growth	30-37 °C

[Ref.: #8926]	Temperature range	mesophilic
[Ref.: #38975]	Temperature range	mesophilic
[Ref.: #48710]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #8926]	Oxygen tolerance	microaerophile
[Ref.: #48710]	Oxygen tolerance	aerobe

[Ref.: #8926]	Murein short key	A11.06
[Ref.: #8926]	Murein types	A3alpha L-Lys-L-Ala₃

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68381]	alpha-cyclodextrin ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68381]	arginine ChEBI	+	hydrolysis	* from API rID32STR
[Ref.: #68381]	D-arabitol ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68381]	D-mannitol ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #68381]	D-ribose ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #68381]	D-tagatose ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68381]	hippurate ChEBI	-	hydrolysis	* from API rID32STR
[Ref.: #68381]	L-arabinose ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68381]	maltose ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #68381]	melezitose ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #68381]	melibiose ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68381]	pullulan ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #68381]	raffinose ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68381]	sorbitol ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68381]	sucrose ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #68381]	trehalose ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #68381]	urea ChEBI	-	hydrolysis	* from API rID32STR
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite
[Ref.: #68381]		acetoin ChEBI	* from API rID32STR

	Physiological tests	Metabolite	Voges-Proskauer-test
[Ref.: #68381]		acetoin ChEBI	-	* from API rID32STR

	Enzyme	Enzyme activity	EC number
[Ref.: #68381]	Alanyl-Phenylalanyl-Proline arylamidase	+		* from API rID32STR
[Ref.: #68381]	alkaline phosphatase	+	3.1.3.1	* from API rID32STR
[Ref.: #68381]	arginine dihydrolase	+	3.5.3.6	* from API rID32STR
[Ref.: #68381]	beta-glucosidase	+	3.2.1.21	* from API rID32STR
[Ref.: #68381]	beta-glucuronidase	+	3.2.1.31	* from API rID32STR
[Ref.: #68381]	beta-mannosidase	+	3.2.1.25	* from API rID32STR
[Ref.: #8926]	catalase	+	1.11.1.6
[Ref.: #8926]	cytochrome-c oxidase	-	1.9.3.1
[Ref.: #68381]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API rID32STR
[Ref.: #68381]	pyrrolidonyl arylamidase	+	3.4.19.3	* from API rID32STR
[Ref.: #68381]	urease	-	3.5.1.5	* from API rID32STR
	Only first 10 entries are displayed. Click here to see all.

API® rID32STR:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Arginine dihydrolaseADH (Arg)	beta-Glucosidasebeta GLU	beta-Galactosidasebeta GAR	beta-Glucuronidasebeta GUR	alpha-Galactosidasealpha GAL	Alkaline PhosphatasePAL	Acid from D-riboseRIB	Acid from D-mannitolMAN	Acid from sorbitolSOR	Acid from lactoseLAC	Acid from trehaloseTRE	Acid from raffinoseRAF	Acid from sucroseSAC	Acid from L-arabinoseLARA	Acid from D-arabitolDARL	Acid from alpha-cyclodextrinCDEX	Acetoin production (Voges Proskauer test)VP	Alanyl-Phenylalanyl-Proline arylamidaseAPPA	beta-Galactosidasebeta GAL	Pyrrolidonyl arylamidasePyrA	N-Acetyl-glucosaminidasebeta NAG	Glycyl-tryptophan arylamidaseGTA	Hydrolysis of hippuric acidHIP	Acid from glycogenGLYG	Acid from pullulanPUL	Acid from maltoseMAL	Acid from melibioseMEL	Acid from melezitoseMLZ	Acidification of methyl beta-D-glucopyranosideMbeta DG	Acid from D-tagatoseTAG	beta-Mannosidasebeta MAN	Urease/urea hydrolysisURE
[Ref.: #8926]	10119	+	+	+	+	+	+	+	+	-	-	+	-	+	-	-	-	-	+	+	+	-	+	-	+	+	+	-	+	-	-	+	-
[Ref.: #8926]	9753	+	+	+	+	+	+	+	+	-	-	+	-	+	-	-	-	-	+	+	+	-	+	-	+	+	+	-	+	+	-	+	-
[Ref.: #8926]	9752	+	+	+	+	+	+	+	+	-	+	+	-	+	-	-	-	-	+	+	+	-	+	-	+	+	+	-	+	+	-	+	-
[Ref.: #8926]	9751	+	+	+	+	-	+	+	+	-	-	+	-	+	-	-	-	-	+	-	+	-	-	-	-	+	+	-	+	-	-	+	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #8926]	Sample type/isolated from	abscess of amazon fresh water dolphin (Inia geoffrensis)
[Ref.: #8926]	Host species	Inia geoffrensis
[Ref.: #8926]	Geographic location (country and/or sea, region)	San Francisco
[Ref.: #8926]	Country	USA
[Ref.: #8926]	Country ISO 3 Code	USA
[Ref.: #8926]	Continent	North America
[Ref.: #8926]	Geographic location	37.7833°/-122.4170°

[Ref.: #48710]	Sample type/isolated from	Amazon freshwater dolphin lesion
* marker position based on {}

Isolation sources categories

#Host

#Mammals

#Aquatic mammal

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence DQ303187 (>99% sequence identity) for Streptococcus iniae subclade from Microbeatlas

Aquatic Samples	134
Soil Samples	47
Animal Samples	5813
Plant Samples	35
Total Samples	6029

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #8926]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Streptococcus iniae 16S-23S ribosomal RNA spacer region and tRNA-Ala gene, complete sequence	AF048773	524	ENA	1346 tax ID	*
[Ref.: #20218]	Streptococcus iniae strain ATCC29178 16S ribosomal RNA gene, partial sequence	AF335572	1536	ENA	1346 tax ID	*
[Ref.: #20218]	Streptococcus iniae strain ATCC 29178 16S ribosomal RNA gene, partial sequence	AY577823	534	ENA	1346 tax ID	*
[Ref.: #20218]	Streptococcus iniae strain ATCC 29178 16S-23S ribosomal RNA intergenic spacer, partial sequence; and tRNA-Ala (trnA) gene, complete sequence	GU330188	511	ENA	1346 tax ID	*
[Ref.: #8926]	Streptococcus iniae strain ATCC 29178 16S ribosomal RNA gene, partial sequence	DQ303187	1466	ENA	1346 tax ID

[Ref.: #8926]

GC-content

32.9 mol%

Availability in culture collections External links

[Ref.: #8926]

Culture collection no.

CCUG 27303, LMG 14520, DSM 20576, ATCC 29178, CECT 7363, CIP 102508

[Ref.: #20218]

Associated Passport(s) in StrainInfo

36334, 36332, 802214, 155578

Literature:

Only first 10 entries are displayed. Click here to see all.

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Restriction fragment length polymorphisms of 16S rDNA and of whole rRNA genes (ribotyping) of Streptococcus iniae strains from the United States and Israel.	Eldar A, Lawhon S, Frelier PF, Assenta L, Simpson BR, Varner PW, Bercovier H	FEMS Microbiol Lett	10.1111/j.1574-6968.1997.tb12564.x	1997	*
Phylogeny	Identification of Streptococcus iniae by commercial bacterial identification systems.	Roach JC, Levett PN, Lavoie MC	J Microbiol Methods	10.1016/j.mimet.2006.02.012	2006	*
Enzymology	Partial two-dimensional gel electrophoresis (2-DE) maps of Streptococcus iniae ATCC29178 and Lactococcus garvieae KG9408.	Shin GW, Palaksha KJ, Yang HH, Shin YS, Kim YR, Lee EY, Oh MJ, Jung TS	Dis Aquat Organ	10.3354/dao070071	2006	*
Phylogeny	Rapid identification of Streptococcus iniae by specific PCR assay utilizing genetic markers in ITS rDNA.	Zhou SM, Fan Y, Zhu XQ, Xie MQ, Li AX	J Fish Dis	10.1111/j.1365-2761.2010.01233.x	2011	*
Pathogenicity	The potential risk of antibiotic resistance of Streptococcus iniae in sturgeon cultivation in Sichuan, China.	Feng Y, Bai M, Geng Y, Chen D, Huang X, Ouyang P, Guo H, Zuo Z, Huang C, Lai W	Environ Sci Pollut Res Int	10.1007/s11356-021-15501-1	2021	*
	Molecular epidemiology of zoonotic streptococcosis/lactococcosis in rainbow trout (Oncorhynchus mykiss) aquaculture in Iran.	Haghighi Karsidani S, Soltani M, Nikbakhat-Brojeni G, Ghasemi M, Skall H	Iran J Microbiol		2010	*
	In vitro antibacterial activities of ethanol extract of iranian propolis (EEIP) against fish pathogenic bacteria (Aeromonas hydrophila, Yersinia ruckeri & Streptococcus iniae).	Tukmechi A, Ownagh A, Mohebbat A	Braz J Microbiol	10.1590/S1517-838220100004000030	2010	*
	Streptococcus iniae outbreaks in Brazilian Nile tilapia (Oreochromis niloticus L:) farms.	Figueiredo HC, Netto LN, Leal CA, Pereira UP, Mian GF	Braz J Microbiol	10.1590/S1517-83822012000200019	2012	*
	Streptococcus shiloi, the name for an agent causing septicemic infection in fish, is a junior synonym of Streptococcus iniae.	Eldar A, Frelier PF, Assenta L, Varner PW, Lawhon S, Bercovier H	Int J Syst Bacteriol	10.1099/00207713-45-4-840	1995	*
	Effects of heat shock protein inducer on Hsp70 gene expression and immune parameters during Streptococcus iniae infection in a Persian sturgeon fry.	Baharloei M, Heidari B, Zamani H, Ghafouri H, Hadavi M	Vet Res Forum	10.30466/vrf.2019.115181.2740	2021	*

References

#8926

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 20576

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#38975 ; Curators of the CIP;
#48710 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 27303

#68381

Automatically annotated from API rID32STR .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

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