Streptococcus equi subsp. zooepidemicus S 34 is a microaerophile, Gram-positive, coccus-shaped human pathogen of the family Streptococcaceae.
Gram-positive coccus-shaped microaerophile human pathogen genome sequence 16S sequence Bacteria| @ref 20215 |
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| Domain Bacteria |
| Phylum Bacillota |
| Class Bacilli |
| Order Lactobacillales |
| Family Streptococcaceae |
| Genus Streptococcus |
| Species Streptococcus equi subsp. zooepidemicus |
| Full scientific name Streptococcus equi subsp. zooepidemicus (ex Frost and Englebrecht 1936) Farrow and Collins 1985 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 9037 | COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) | Medium recipe at MediaDive | Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base | ||
| 9037 | TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) | Medium recipe at MediaDive | Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water | ||
| 39848 | MEDIUM 6 - Columbia agar with 10 % horse blood | Distilled water make up to (1000.000 ml);Columbia agar (39.000 g);Horseblood (100.000 ml) | |||
| 119117 | CIP Medium 6 | Medium recipe at CIP | |||
| 119117 | CIP Medium 72 | Medium recipe at CIP | |||
| 119117 | CIP Medium 6-Boites-Biorad | Medium recipe at CIP |
| @ref | Spore formation | Confidence | |
|---|---|---|---|
| 125439 | 98.3 |
| @ref | Salt | Growth | Tested relation | Concentration | |
|---|---|---|---|---|---|
| 119117 | NaCl | growth | 6.5 % |
| @ref | Murein short key | Type | |
|---|---|---|---|
| 9037 | A11.05 | A3alpha L-Lys-L-Ala2 |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68381 | 40585 ChEBI | alpha-cyclodextrin | + | builds acid from | from API rID32STR |
| 68381 | 29016 ChEBI | arginine | + | hydrolysis | from API rID32STR |
| 68381 | 18333 ChEBI | D-arabitol | - | builds acid from | from API rID32STR |
| 68381 | 16899 ChEBI | D-mannitol | - | builds acid from | from API rID32STR |
| 68381 | 16988 ChEBI | D-ribose | + | builds acid from | from API rID32STR |
| 68381 | 16443 ChEBI | D-tagatose | - | builds acid from | from API rID32STR |
| 119117 | 4853 ChEBI | esculin | - | hydrolysis | |
| 68381 | 28087 ChEBI | glycogen | + | builds acid from | from API rID32STR |
| 68381 | 606565 ChEBI | hippurate | - | hydrolysis | from API rID32STR |
| 68381 | 30849 ChEBI | L-arabinose | - | builds acid from | from API rID32STR |
| 68381 | 17716 ChEBI | lactose | + | builds acid from | from API rID32STR |
| 68381 | 17306 ChEBI | maltose | + | builds acid from | from API rID32STR |
| 68381 | 6731 ChEBI | melezitose | - | builds acid from | from API rID32STR |
| 68381 | 28053 ChEBI | melibiose | - | builds acid from | from API rID32STR |
| 68381 | 320055 ChEBI | methyl beta-D-glucopyranoside | + | builds acid from | from API rID32STR |
| 119117 | 17632 ChEBI | nitrate | - | reduction | |
| 119117 | 16301 ChEBI | nitrite | - | reduction | |
| 68381 | 27941 ChEBI | pullulan | + | builds acid from | from API rID32STR |
| 68381 | 16634 ChEBI | raffinose | - | builds acid from | from API rID32STR |
| 68381 | 30911 ChEBI | sorbitol | + | builds acid from | from API rID32STR |
| 68381 | 17992 ChEBI | sucrose | + | builds acid from | from API rID32STR |
| 68381 | 27082 ChEBI | trehalose | - | builds acid from | from API rID32STR |
| 68381 | 16199 ChEBI | urea | - | hydrolysis | from API rID32STR |
| @ref | Chebi-ID | Metabolite | Production | |
|---|---|---|---|---|
| 68381 | 15688 ChEBI | acetoin | from API rID32STR |
| @ref | Chebi-ID | Metabolite | Voges-proskauer-test | |
|---|---|---|---|---|
| 68381 | 15688 ChEBI | acetoin | - | from API rID32STR |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 68381 | Alanyl-Phenylalanyl-Proline arylamidase | + | from API rID32STR | |
| 119117 | alcohol dehydrogenase | - | 1.1.1.1 | |
| 68381 | alkaline phosphatase | + | 3.1.3.1 | from API rID32STR |
| 68382 | alkaline phosphatase | + | 3.1.3.1 | from API zym |
| 68382 | alpha-chymotrypsin | + | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68381 | alpha-galactosidase | - | 3.2.1.22 | from API rID32STR |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | + | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 68381 | arginine dihydrolase | + | 3.5.3.6 | from API rID32STR |
| 68382 | beta-galactosidase | - | 3.2.1.23 | from API zym |
| 119117 | beta-galactosidase | + | 3.2.1.23 | |
| 68381 | beta-galactosidase | - | 3.2.1.23 | from API rID32STR |
| 68382 | beta-glucosidase | - | 3.2.1.21 | from API zym |
| 68382 | beta-glucuronidase | + | 3.2.1.31 | from API zym |
| 68381 | beta-glucuronidase | + | 3.2.1.31 | from API rID32STR |
| 9037 | catalase | - | 1.11.1.6 | |
| 119117 | catalase | - | 1.11.1.6 | |
| 68382 | cystine arylamidase | + | 3.4.11.3 | from API zym |
| 9037 | cytochrome-c oxidase | - | 1.9.3.1 | |
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | + | from API zym | |
| 68381 | glycyl tryptophan arylamidase | - | from API rID32STR | |
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 68382 | lipase (C 14) | + | from API zym | |
| 119117 | lysine decarboxylase | - | 4.1.1.18 | |
| 68381 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API rID32STR |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | from API zym | |
| 119117 | ornithine decarboxylase | - | 4.1.1.17 | |
| 119117 | oxidase | - | ||
| 68381 | pyrrolidonyl arylamidase | - | 3.4.19.3 | from API rID32STR |
| 68382 | trypsin | - | 3.4.21.4 | from API zym |
| 68381 | urease | - | 3.5.1.5 | from API rID32STR |
| 68382 | valine arylamidase | + | from API zym |
| @ref | ADH (Arg) | beta GLU | beta GAR | beta GUR | alpha GAL | PAL | RIB | MAN | SOR | LAC | TRE | RAF | SAC | LARA | DARL | Acid from alpha-cyclodextrinCDEX | Acetoin production (Voges Proskauer test)VP | Alanyl-Phenylalanyl-Proline arylamidaseAPPA | beta GAL | Pyrrolidonyl arylamidasePyrA | N-Acetyl-glucosaminidasebeta NAG | Glycyl-tryptophan arylamidaseGTA | HIP | GLYG | PUL | MAL | MEL | MLZ | Acidification of methyl beta-D-glucopyranosideMbeta DG | TAG | beta MAN | URE | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 9037 | + | - | - | + | - | + | + | - | + | + | - | - | + | - | - | + | - | + | - | - | - | - | - | + | + | + | - | - | + | - | + | - | |
| 9037 | + | + | + | + | - | + | + | - | + | + | - | - | + | - | - | + | - | + | - | - | - | - | - | + | + | + | - | - | + | - | - | - | |
| 9037 | + | - | - | + | - | + | + | - | + | + | - | - | + | - | - | + | - | + | - | - | - | - | - | + | + | + | - | - | + | - | - | - | |
| 9037 | + | + | + | + | - | + | + | - | + | + | - | - | + | - | - | + | - | + | - | - | - | - | - | + | + | + | - | - | + | - | + | - | |
| 9037 | + | + | - | + | - | + | + | - | + | + | - | - | + | - | - | + | - | + | - | - | - | - | - | + | + | + | - | - | + | - | + | - | |
| 9037 | + | - | - | + | - | + | + | - | + | + | - | - | + | - | - | + | - | + | - | - | - | - | - | + | + | + | - | - | + | - | + | - | |
| 9037 | + | + | + | + | - | + | + | - | + | + | - | - | + | - | - | + | - | + | - | - | - | - | - | + | + | + | - | - | + | - | + | - | |
| 9037 | + | + | - | + | - | + | + | - | + | + | - | - | + | - | - | + | - | + | - | - | - | - | - | + | + | + | - | - | + | - | + | - | |
| 9037 | + | +/- | - | + | - | + | + | - | + | + | - | - | + | - | - | + | - | + | - | - | - | - | - | + | + | + | - | - | + | - | + | - |
| Cat1 | Cat2 | Cat3 | |
|---|---|---|---|
| #Host | #Mammals | #Bovinae (Cow, Cattle) | |
| #Infection | #Disease | - | |
| #Infection | #Inflammation | - | |
| #Host Body-Site | #Organ | #Mammary gland |
Global distribution of 16S sequence EF406034 (>99% sequence identity) for Streptococcus equi subclade from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | 46463_D01 assembly for Streptococcus equi subsp. zooepidemicus NCTC4676 | contig | 40041 | 78.81 | ||||
| 66792 | 41906_F01 assembly for Streptococcus equi subsp. zooepidemicus NCTC7023 | contig | 40041 | 77.37 |
| 9037 | GC-content (mol%)41.3 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | no | 98.30 | no |
| 125439 | motility | BacteriaNetⓘ | no | 83.40 | no |
| 125439 | gram_stain | BacteriaNetⓘ | positive | 75.70 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | anaerobe | 97.30 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 86.10 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 92.46 | no |
| 125438 | spore-forming | spore-formingⓘ | no | 89.12 | no |
| 125438 | aerobic | aerobicⓘ | no | 98.45 | no |
| 125438 | thermophilic | thermophileⓘ | no | 95.94 | yes |
| 125438 | flagellated | motile2+ⓘ | no | 92.00 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Development of a multiplex quantitative PCR assay for simultaneous detection of Treponema phagedenis, Treponema pedis, Treponema medium, and 'Treponema vincentii' and evaluation on bovine digital dermatitis biopsies. | Frosth S, Eriksson HK, Rosander A. | Vet Res Commun | 10.1007/s11259-023-10147-5 | 2023 | ||
| Rapid identification of Stenotrophomonas maltophilia by peptide nucleic acid fluorescence in situ hybridization. | Hansen N, Rasmussen AK, Fiandaca MJ, Kragh KN, Bjarnsholt T, Hoiby N, Stender H, Guardabassi L. | New Microbes New Infect | 10.1002/nmi2.38 | 2014 | ||
| A novel real-time PCR assay for specific detection of Brucella melitensis. | Kaden R, Ferrari S, Alm E, Wahab T. | BMC Infect Dis | 10.1186/s12879-017-2327-7 | 2017 | ||
| Probable zoonotic pulmonary prosthetic valve infective endocarditis and acalculous cholecystitis caused by Streptococcus equi subspecies zooepidemicus. | Eustace M, Strey G, Kidd TJ, McNamara JF. | BMJ Case Rep | 10.1136/bcr-2024-262383 | 2024 | ||
| Genetics | Bacteriocin Producing Streptococcus agalactiae Strains Isolated from Bovine Mastitis in Brazil. | Vidal Amaral JR, Juca Ramos RT, Almeida Araujo F, Bentes Kato R, Figueira Aburjaile F, de Castro Soares S, Goes-Neto A, Matiuzzi da Costa M, Azevedo V, Brenig B, Soares de Oliveira S, Soares Rosado A. | Microorganisms | 10.3390/microorganisms10030588 | 2022 | |
| Genetics | Molecular Features and Antimicrobial Susceptibilities of Streptococcus equi ssp. equi Isolates from Strangles Cases in Indonesia. | Rotinsulu DA, Ewers C, Kerner K, Amrozi A, Soejoedono RD, Semmler T, Bauerfeind R. | Vet Sci | 10.3390/vetsci10010049 | 2023 | |
| Resolving Atomic-Level Dynamics and Interactions of High-Molecular-Weight Hyaluronic Acid by Multidimensional Solid-State NMR. | Rampratap P, Lasorsa A, Arunachalam A, Kamperman M, Walvoort MTC, van der Wel PCA. | ACS Appl Mater Interfaces | 10.1021/acsami.4c08428 | 2024 | ||
| Enzymology | Comparison of standard and on-plate extraction protocols for identification of mastitis-causing bacteria by MALDI-TOF MS. | Barcelos MM, Martins L, Grenfell RC, Juliano L, Anderson KL, Dos Santos MV, Goncalves JL. | Braz J Microbiol | 10.1007/s42770-019-00110-5 | 2019 | |
| Metabolism | SFS, a novel fibronectin-binding protein from Streptococcus equi, inhibits the binding between fibronectin and collagen. | Lindmark H, Guss B. | Infect Immun | 10.1128/iai.67.5.2383-2388.1999 | 1999 | |
| Controlling drug-resistant bacteria in Arabian horses: bacteriophage cocktails for treating wound infections. | Khalid E, Tartor YH, Ammar AM, Abdelaziz R, Mahmmod Y, Abdelkhalek A. | Front Vet Sci | 10.3389/fvets.2025.1609955 | 2025 | ||
| Bactericidal activities and biochemical features of 16 antimicrobial peptides against bovine-mastitis causative pathogens. | Cho HS, Kim D, Jeon H, Somasundaram P, Soundrarajan N, Park C. | Vet Res | 10.1186/s13567-024-01402-x | 2024 | ||
| Enhanced hyaluronic acid production in Streptococcus zooepidemicus by an optimized culture medium containing hyaluronidase inhibitor. | Samadi M, Khodabandeh Shahraky M, Tabandeh F, Aminzadeh S, Dina M. | Prep Biochem Biotechnol | 10.1080/10826068.2021.1955710 | 2022 | ||
| A Novel Real-Time PCR Assay for the Rapid Detection of Virulent Streptococcus equi Subspecies zooepidemicus-An Emerging Pathogen of Swine. | Kuchipudi SV, Surendran Nair M, Yon M, Gontu A, Nissly RH, Barry R, Greenawalt D, Pierre T, Li L, Thirumalapura N, Tewari D, Jayarao B. | Front Vet Sci | 10.3389/fvets.2021.604675 | 2021 | ||
| Genomewide Analysis and Biological Characterization of Cathelicidins with Potent Antimicrobial Activity and Low Cytotoxicity from Three Bat Species. | Choi M, Cho HS, Ahn B, Prathap S, Nagasundarapandian S, Park C. | Antibiotics (Basel) | 10.3390/antibiotics11080989 | 2022 | ||
| Presence of Francisella tularensis subsp. holarctica DNA in the Aquatic Environment in France. | Brunet CD, Hennebique A, Peyroux J, Pelloux I, Caspar Y, Maurin M. | Microorganisms | 10.3390/microorganisms9071398 | 2021 | ||
| Phylogeny | High-Quality Nucleic Acid Isolation from Hard-to-Lyse Bacterial Strains Using PMAP-36, a Broad-Spectrum Antimicrobial Peptide. | Cho HS, Choi M, Lee Y, Jeon H, Ahn B, Soundrarajan N, Hong K, Kim JH, Park C. | Int J Mol Sci | 10.3390/ijms22084149 | 2021 | |
| Biotechnology | Validation of the Peel Plate Staphylococcus Aureus (SA) Test for Enumeration of S. aureus in Selected Foods and Non-Cultured Dairy Products: AOAC Performance Tested MethodSM 082401. | Salter RS, Durbin GW, Li S, Gilbert M, Crowley ES, Deterding A, Bastin B. | J AOAC Int | 10.1093/jaoacint/qsae083 | 2025 | |
| Enzymology | Etiologic and epidemiologic analysis of bacterial infectious upper respiratory disease in Thoroughbred horses at the Seoul Race Park. | Ryu SH, Koo HC, Lee YW, Park YH, Lee CW. | J Vet Sci | 10.4142/jvs.2011.12.2.195 | 2011 | |
| Metabolism | Production and properties of bacteriocin-like inhibitory substances from the swine pathogen Streptococcus suis serotype 2. | Melancon D, Grenier D. | Appl Environ Microbiol | 10.1128/aem.69.8.4482-4488.2003 | 2003 | |
| Immunostimulatory effects of the anionic alkali mineral complex Barodon on equine lymphocytes. | Koo H, Ryu SH, Ahn HJ, Jung WK, Park YK, Kwon NH, Kim SH, Kim JM, Yoo BW, Choi SI, Davis WC, Park YH. | Clin Vaccine Immunol | 10.1128/cvi.00150-06 | 2006 | ||
| Analysis of immunoreactivity to a Streptococcus equi subsp. zooepidemicus M-like protein To confirm an outbreak of poststreptococcal glomerulonephritis, and sequences of M-like proteins from isolates obtained from different host species. | Nicholson ML, Ferdinand L, Sampson JS, Benin A, Balter S, Pinto SW, Dowell SF, Facklam RR, Carlone GM, Beall B. | J Clin Microbiol | 10.1128/jcm.38.11.4126-4130.2000 | 2000 | ||
| Metabolism | Evaluation of a FRET-peptide substrate to predict virulence in Pseudomonas aeruginosa. | Kaman WE, Arkoubi-El Arkoubi NE, Roffel S, Endtz HP, van Belkum A, Bikker FJ, Hays JP. | PLoS One | 10.1371/journal.pone.0081428 | 2013 | |
| Phylogeny | 16S rRNA gene sequencing on a benchtop sequencer: accuracy for identification of clinically important bacteria. | Watts GS, Youens-Clark K, Slepian MJ, Wolk DM, Oshiro MM, Metzger GS, Dhingra D, Cranmer LD, Hurwitz BL. | J Appl Microbiol | 10.1111/jam.13590 | 2017 | |
| Metabolism | Acquisition of host plasmin activity by the Swine pathogen Streptococcus suis serotype 2. | Jobin MC, Brassard J, Quessy S, Gottschalk M, Grenier D. | Infect Immun | 10.1128/iai.72.1.606-610.2004 | 2004 | |
| Phylogeny | Performances of VITEK 2 colorimetric cards for identification of gram-positive and gram-negative bacteria. | Wallet F, Loiez C, Renaux E, Lemaitre N, Courcol RJ. | J Clin Microbiol | 10.1128/jcm.43.9.4402-4406.2005 | 2005 | |
| Identification of lipoprotein homologues of pneumococcal PsaA in the equine pathogens Streptococcus equi and Streptococcus zooepidemicus. | Harrington DJ, Greated JS, Chanter N, Sutcliffe IC. | Infect Immun | 10.1128/iai.68.10.6048-6051.2000 | 2000 |
| #9037 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 20727 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #39848 | ; Curators of the CIP; |
| #47770 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 23256 |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #68381 | Automatically annotated from API rID32STR . |
| #68382 | Automatically annotated from API zym . |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #119117 | Collection of Institut Pasteur ; Curators of the CIP; CIP 103228 |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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