Bartonella vinsonii (CCUG 30453, ATCC VR-152, CIP 103738)

Name: Bartonella vinsonii (CCUG 30453, ATCC VR-152, CIP 103738)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 146145

Type strain

Strain Designation Baker

Culture col. no. CCUG 30453 ATCC VR-152 CIP 103738 ATCC 152-VR Baker

NCBI tax ID(s) 33047 110577

Special Collections CCUG CIP

Links

Bartonella vinsonii Baker is a microaerophile, Gram-negative, rod-shaped prokaryote of the family Bartonellaceae.

Gram-negative rod-shaped microaerophile genome sequence

Name and taxonomic classification

SI-ID 51909

ATCC VR-152,CCUG 30453,CIP 103738

@ref 20215

Last LPSN update 2025-12-16 10:05:01

Domain Pseudomonadati

Phylum Pseudomonadota

Class Alphaproteobacteria

Order Hyphomicrobiales

Family Bartonellaceae

Genus Bartonella

Species Bartonella vinsonii

Full scientific name Bartonella vinsonii (Weiss and Dasch 1982) Brenner et al. 1993

Synonyms (1)

Rochalimaea vinsonii

BacDive ID	Other strains from **Bartonella vinsonii** (1)	Type strain
138825	B. vinsonii

Morphology

Cell morphology

@ref	Gram stain	Confidence
125439	negative	98.6
125438	negative	98.783
40774	negative

Colony morphology

50087

Incubation period3 days

Culture and growth conditions

Culture medium

@ref	Name	Growth	Composition
40774	MEDIUM 70 - columbia agar with horse blood and hemin for Bartonella		Distilled water make up to (1000.000 ml);Columbia agar (39.000 g);Horseblood (100.000 ml);Hemin solution - M00149 (10.000 ml)
40774	CIP Medium 70

Culture temp

@ref	Growth	Type	Temperature (°C)
40774	positive	growth	37
50087	positive	growth	37

Physiology and metabolism

Oxygen tolerance

50087

Oxygen tolerancemicroaerophile

Spore formation

@ref	Spore formation	Confidence
125439		99.6
125438		93.455

Halophily

@ref	Salt	Tested relation	Concentration
40774	NaCl	growth	0 %
40774	NaCl	growth	2 %
40774	NaCl	growth	4 %
40774	NaCl	growth	6 %
40774	NaCl	growth	8 %
40774	NaCl	growth	10 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68371	27613 ChEBI	amygdalin	-	builds acid from	from API 50CH acid
68371	18305 ChEBI	arbutin	+	builds acid from	from API 50CH acid
68371	17108 ChEBI	D-arabinose	-	builds acid from	from API 50CH acid
68371	18333 ChEBI	D-arabitol	-	builds acid from	from API 50CH acid
68371	15824 ChEBI	D-fructose	+	builds acid from	from API 50CH acid
68371	28847 ChEBI	D-fucose	-	builds acid from	from API 50CH acid
68371	12936 ChEBI	D-galactose	-	builds acid from	from API 50CH acid
68371	17634 ChEBI	D-glucose	+	builds acid from	from API 50CH acid
68371	62318 ChEBI	D-lyxose	-	builds acid from	from API 50CH acid
68371	16899 ChEBI	D-mannitol	-	builds acid from	from API 50CH acid
68371	17924 ChEBI	D-sorbitol	-	builds acid from	from API 50CH acid
68371	16443 ChEBI	D-tagatose	-	builds acid from	from API 50CH acid
68371	65327 ChEBI	D-xylose	-	builds acid from	from API 50CH acid
68371	17113 ChEBI	erythritol	-	builds acid from	from API 50CH acid
40774	4853 ChEBI	esculin	-	hydrolysis
68371	4853 ChEBI	esculin	+	builds acid from	from API 50CH acid
68371	16813 ChEBI	galactitol	-	builds acid from	from API 50CH acid
68371	28066 ChEBI	gentiobiose	-	builds acid from	from API 50CH acid
40774	606565 ChEBI	hippurate	+	hydrolysis
68371	15443 ChEBI	inulin	-	builds acid from	from API 50CH acid
68371	30849 ChEBI	L-arabinose	-	builds acid from	from API 50CH acid
68371	18403 ChEBI	L-arabitol	-	builds acid from	from API 50CH acid
68371	18287 ChEBI	L-fucose	-	builds acid from	from API 50CH acid
68371	62345 ChEBI	L-rhamnose	-	builds acid from	from API 50CH acid
68371	17266 ChEBI	L-sorbose	-	builds acid from	from API 50CH acid
68371	65328 ChEBI	L-xylose	-	builds acid from	from API 50CH acid
68371	17716 ChEBI	lactose	-	builds acid from	from API 50CH acid
68371	17306 ChEBI	maltose	+	builds acid from	from API 50CH acid
68371	6731 ChEBI	melezitose	-	builds acid from	from API 50CH acid
68371	28053 ChEBI	melibiose	-	builds acid from	from API 50CH acid
68371	320061 ChEBI	methyl alpha-D-glucopyranoside	-	builds acid from	from API 50CH acid
68371	43943 ChEBI	methyl alpha-D-mannoside	-	builds acid from	from API 50CH acid
68371	74863 ChEBI	methyl beta-D-xylopyranoside	-	builds acid from	from API 50CH acid
68371	17268 ChEBI	myo-inositol	-	builds acid from	from API 50CH acid
40774	17632 ChEBI	nitrate	-	reduction
40774	16301 ChEBI	nitrite	-	reduction
68371		Potassium 2-ketogluconate	-	builds acid from	from API 50CH acid
68371		Potassium 5-ketogluconate	-	builds acid from	from API 50CH acid
68371	16634 ChEBI	raffinose	-	builds acid from	from API 50CH acid
68371	15963 ChEBI	ribitol	-	builds acid from	from API 50CH acid
68371	17814 ChEBI	salicin	+	builds acid from	from API 50CH acid
68371	17992 ChEBI	sucrose	-	builds acid from	from API 50CH acid
68371	27082 ChEBI	trehalose	+	builds acid from	from API 50CH acid
68371	32528 ChEBI	turanose	-	builds acid from	from API 50CH acid
68371	17151 ChEBI	xylitol	-	builds acid from	from API 50CH acid

Metabolite production

@ref	Chebi-ID	Metabolite	Production
40774	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test
40774	15688 ChEBI	acetoin	-
40774	17234 ChEBI	glucose

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	-	3.1.3.2	from API zym
40774	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	-	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68382	beta-galactosidase	-	3.2.1.23	from API zym
40774	beta-galactosidase	-	3.2.1.23
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
40774	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
40774	gamma-glutamyltransferase	-	2.3.2.2
40774	gelatinase	-
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
40774	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
40774	ornithine decarboxylase	-	4.1.1.17
40774	oxidase	-
40774	phenylalanine ammonia-lyase	-	4.3.1.24
68382	trypsin	-	3.4.21.4	from API zym
40774	tryptophan deaminase	-
40774	urease	-	3.5.1.5
68382	valine arylamidase	-		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
40774	-	-	+	+	-	+	-	-	-	-	-	+	-	-	-	-	-	-	-	-

API 50CHac

@ref	ControlQ	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
40774	not determinedn.d.	+/-	-	-	-	+/-	-	-	-	-	-	+	+	+/-	-	-	-	-	-	-	-	-	+/-	-	+	+	+	+/-	+	-	-	-	+	-	-	-	+/-	+/-	-	-	-	-	-	-	-	-	-	+/-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Mammals	#Muridae (Mouse/Rat)
#Host Body-Site	#Organ	#Spleen

Isolation

@ref	Geographic location	Country	Country ISO 3 Code	Continent
40774	Quebec	Canada	CAN	North America
50087	Quebec	Canada	CAN	North America
40774	Quebec	Canada	CAN	North America

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
40774	2	Risk group (French classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	Bartonella_vinsonii_subsp_vinsonii_CIP_103738 assembly for Bartonella vinsonii subsp. vinsonii CIP 103738	scaffold	GCA_902825235	110577.3	8115074626	110577	51.6

Genome browser: GCA_902825235

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Bartonella vinsonii subsp. vinsonii CIP 103738
NCBI: GCA_902825235

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	microaerophile	84.40	no
125439	gram_stain	BacteriaNetⓘ	negative	98.60	no
125439	motility	BacteriaNetⓘ	no	56.00	no
125439	spore_formation	BacteriaNetⓘ	no	99.60	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Bartonella vinsonii subsp. vinsonii CIP 103738
NCBI: GCA_902825235.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	98.78	no
125438	anaerobic	anaerobicⓘ	no	88.94	yes
125438	aerobic	aerobicⓘ	no	82.23	yes
125438	spore-forming	spore-formingⓘ	no	93.46	no
125438	thermophilic	thermophileⓘ	no	94.58	no
125438	flagellated	motile2+ⓘ	no	89.01	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Enzymology	Isolation of a new subspecies, Bartonella vinsonii subsp. arupensis, from a cattle rancher: identity with isolates found in conjunction with Borrelia burgdorferi and Babesia microti among naturally infected mice.	Welch DF, Carroll KC, Hofmeister EK, Persing DH, Robison DA, Steigerwalt AG, Brenner DJ.	J Clin Microbiol	10.1128/jcm.37.8.2598-2601.1999	1999
Enzymology	Infection of domestic dogs in peru by zoonotic bartonella species: a cross-sectional prevalence study of 219 asymptomatic dogs.	Diniz PP, Morton BA, Tngrian M, Kachani M, Barron EA, Gavidia CM, Gilman RH, Angulo NP, Brenner EC, Lerner R, Chomel BB.	PLoS Negl Trop Dis	10.1371/journal.pntd.0002393	2013
Phylogeny	Genetic classification and differentiation of Bartonella species based on comparison of partial ftsZ gene sequences.	Zeaiter Z, Liang Z, Raoult D.	J Clin Microbiol	10.1128/jcm.40.10.3641-3647.2002	2002
Phylogeny	Microarray for serotyping of Bartonella species.	Bonhomme CJ, Nappez C, Raoult D.	BMC Microbiol	10.1186/1471-2180-7-59	2007
	Production of Bartonella genus-specific monoclonal antibodies.	Liang Z, La Scola B, Lepidi H, Raoult D.	Clin Diagn Lab Immunol	10.1128/cdli.8.4.847-849.2001	2001
Enzymology	Molecular characterization of the sucB gene encoding the immunogenic dihydrolipoamide succinyltransferase protein of Bartonella vinsonii subsp. berkhoffii and Bartonella quintana.	Gilmore RD, Carpio AM, Kosoy MY, Gage KL.	Infect Immun	10.1128/iai.71.8.4818-4822.2003	2003
Enzymology	Bartonella clarridgeiae, a newly recognized zoonotic pathogen causing inoculation papules, fever, and lymphadenopathy (cat scratch disease).	Kordick DL, Hilyard EJ, Hadfield TL, Wilson KH, Steigerwalt AG, Brenner DJ, Breitschwerdt EB.	J Clin Microbiol	10.1128/jcm.35.7.1813-1818.1997	1997
	Prevalence of Bartonella henselae and Bartonella clarridgeiae in an urban Indonesian cat population.	Marston EL, Finkel B, Regnery RL, Winoto IL, Graham RR, Wignal S, Simanjuntak G, Olson JG.	Clin Diagn Lab Immunol	10.1128/cdli.6.1.41-44.1999	1999
	Genomic fingerprinting of Bartonella species by repetitive element PCR for distinguishing species and isolates.	Rodriguez-Barradas MC, Hamill RJ, Houston ED, Georghiou PR, Clarridge JE, Regnery RL, Koehler JE.	J Clin Microbiol	10.1128/jcm.33.5.1089-1093.1995	1995
Phylogeny	Use of rpoB gene analysis for detection and identification of Bartonella species.	Renesto P, Gouvernet J, Drancourt M, Roux V, Raoult D.	J Clin Microbiol	10.1128/jcm.39.2.430-437.2001	2001
Enzymology	Isolation and characterization by immunofluorescence, sodium dodecyl sulfate-polyacrylamide gel electrophoresis, western blot, restriction fragment length polymorphism-PCR, 16S rRNA gene sequencing, and pulsed-field gel electrophoresis of Rochalimaea quintana from a patient with bacillary angiomatosis.	Maurin M, Roux V, Stein A, Ferrier F, Viraben R, Raoult D.	J Clin Microbiol	10.1128/jcm.32.5.1166-1171.1994	1994

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#40774	Collection of Institut Pasteur ; Curators of the CIP; CIP 103738
#50087	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 30453
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#68371	Automatically annotated from API 50CH acid .
#68382	Automatically annotated from API zym .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Bartonella vinsonii (CCUG 30453, ATCC VR-152, CIP 103738)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Metabolite utilization

Metabolite production

Metabolite tests

Enzymes

API zym

API 50CHac

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_902825235

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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