Escherichia hermannii (CCUG 29871)

Name: Escherichia hermannii (CCUG 29871)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 145877

Type strain

Culture col. no. CCUG 29871

NCBI tax ID(s) 565

Special Collections CCUG

Links

Escherichia hermannii CCUG 29871 is a prokaryote that was isolated from Canned soup.

Name and taxonomic classification

SI-ID 53931

CCUG 29871

@ref 20215

Last LPSN update 2025-12-16 10:04:58

Domain Pseudomonadati

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Enterobacterales

Family Enterobacteriaceae

Genus Escherichia

Species Escherichia hermannii

Full scientific name Escherichia hermannii Brenner et al. 1983

Synonyms (1)

Atlantibacter hermannii

BacDive ID	Other strains from **Escherichia hermannii** (27)	Type strain
4927	E. hermannii 980-72, DSM 4560, ATCC 33650, CIP 103176, ... (type strain)
137285	E. hermannii 3103-85, CIP 104945
143727	E. hermannii CCUG 21148
143731	E. hermannii CCUG 21152
143732	E. hermannii CCUG 21153
143733	E. hermannii CCUG 21154
143734	E. hermannii CCUG 21155
143766	E. hermannii CCUG 21201
143767	E. hermannii CCUG 21202
144644	E. hermannii CCUG 26042
144788	E. hermannii CCUG 26553
144830	E. hermannii CCUG 26685
151676	E. hermannii CCUG 44600 A
155595	E. hermannii CCUG 58290
163132	E. hermannii JCM 2133
163143	E. hermannii JCM 2134
163151	E. hermannii JCM 2135
163160	E. hermannii JCM 2136
176444	E. hermannii 107051, DSM 107051
176445	E. hermannii 108046, DSM 108046
176446	E. hermannii 108319, DSM 108319
176447	E. hermannii 108320, DSM 108320
176448	E. hermannii 108321, DSM 108321
176449	E. hermannii 108325, DSM 108325
176450	E. hermannii 108326, DSM 108326
176451	E. hermannii 110456, DSM 110456
176452	E. hermannii Dres_EscherHerm_17, DSM 119894

Morphology

Culture and growth conditions

Physiology and metabolism

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68368	27613 ChEBI	amygdalin	+	fermentation	from API 20E
68374	29016 ChEBI	arginine	-	hydrolysis	from API ID32E
68368	29016 ChEBI	arginine	-	hydrolysis	from API 20E
68374	17057 ChEBI	cellobiose	-	builds acid from	from API ID32E
68368	16947 ChEBI	citrate	-	assimilation	from API 20E
68374	18333 ChEBI	D-arabitol	-	builds acid from	from API ID32E
68374	18024 ChEBI	D-galacturonic acid	+	builds acid from	from API ID32E
68368	17634 ChEBI	D-glucose	+	fermentation	from API 20E
68374	17634 ChEBI	D-glucose	+	builds acid from	from API ID32E
68368	16899 ChEBI	D-mannitol	+	fermentation	from API 20E
68374	16899 ChEBI	D-mannitol	+	builds acid from	from API ID32E
68368	5291 ChEBI	gelatin	-	hydrolysis	from API 20E
68368	30849 ChEBI	L-arabinose	+	fermentation	from API 20E
68374	30849 ChEBI	L-arabinose	+	builds acid from	from API ID32E
68374	18403 ChEBI	L-arabitol	-	builds acid from	from API ID32E
68368	62345 ChEBI	L-rhamnose	+	fermentation	from API 20E
68374	62345 ChEBI	L-rhamnose	+	builds acid from	from API ID32E
68374	25094 ChEBI	lysine	-	degradation	from API ID32E
68368	25094 ChEBI	lysine	-	degradation	from API 20E
68374	15792 ChEBI	malonate	-	assimilation	from API ID32E
68374	17306 ChEBI	maltose	+	builds acid from	from API ID32E
68368	28053 ChEBI	melibiose	-	fermentation	from API 20E
68368	17268 ChEBI	myo-inositol	-	fermentation	from API 20E
68374	17268 ChEBI	myo-inositol	-	builds acid from	from API ID32E
68368	18257 ChEBI	ornithine	+	degradation	from API 20E
68374	18257 ChEBI	ornithine	+	degradation	from API ID32E
68374	18394 ChEBI	palatinose	-	builds acid from	from API ID32E
68374		Potassium 5-ketogluconate	-	builds acid from	from API ID32E
68374	15963 ChEBI	ribitol	-	builds acid from	from API ID32E
68368	30911 ChEBI	sorbitol	-	fermentation	from API 20E
68374	30911 ChEBI	sorbitol	-	builds acid from	from API ID32E
68368	17992 ChEBI	sucrose	-	fermentation	from API 20E
68374	17992 ChEBI	sucrose	-	builds acid from	from API ID32E
68374	27082 ChEBI	trehalose	+	builds acid from	from API ID32E
68368	27897 ChEBI	tryptophan	+	energy source	from API 20E
68374	27897 ChEBI	tryptophan	+	energy source	from API ID32E
68368	16199 ChEBI	urea	-	hydrolysis	from API 20E
68374	16199 ChEBI	urea	-	hydrolysis	from API ID32E

Metabolite production

@ref	Chebi-ID	Metabolite
68368	15688 ChEBI	acetoin	from API 20E
68368	16136 ChEBI	hydrogen sulfide	from API 20E
68374	35581 ChEBI	indole	from API ID32E
68368	35581 ChEBI	indole	from API 20E

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Indole test
68368	15688 ChEBI	acetoin	-		from API 20E
68374	35581 ChEBI	indole		+	from API ID32E
68368	35581 ChEBI	indole		+	from API 20E

Enzymes

@ref	Value	Activity	Ec
68374	alpha-galactosidase	-	3.2.1.22	from API ID32E
68374	alpha-glucosidase	-	3.2.1.20	from API ID32E
68374	alpha-maltosidase	-		from API ID32E
68374	arginine dihydrolase	-	3.5.3.6	from API ID32E
68368	arginine dihydrolase	-	3.5.3.6	from API 20E
68374	beta-galactosidase	+	3.2.1.23	from API ID32E
68368	beta-galactosidase	+	3.2.1.23	from API 20E
68374	beta-glucosidase	+	3.2.1.21	from API ID32E
68374	beta-glucuronidase	-	3.2.1.31	from API ID32E
68368	cytochrome oxidase	-	1.9.3.1	from API 20E
68368	gelatinase	-		from API 20E
68374	L-aspartate arylamidase	+	3.4.11.21	from API ID32E
68374	lipase	-		from API ID32E
68374	lysine decarboxylase	-	4.1.1.18	from API ID32E
68368	lysine decarboxylase	-	4.1.1.18	from API 20E
68374	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API ID32E
68368	ornithine decarboxylase	+	4.1.1.17	from API 20E
68374	ornithine decarboxylase	+	4.1.1.17	from API ID32E
68368	tryptophan deaminase	-	4.1.99.1	from API 20E
68374	urease	-	3.5.1.5	from API ID32E
68368	urease	-	3.5.1.5	from API 20E

API 20E

@ref	ONPG	ADH (Arg)	LDC (Lys)	ODC	CIT	H2S productionH2S	URE	TDA (Trp)	IND	Acetoin production (Voges Proskauer test)VP	GEL	GLU	MAN	INO	Sor	RHA	SAC	MEL	AMY	ARA	OX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	OF-O	OF-F
49775	+	-	-	+	-	-	-	-	+	-	-	+	+	-	-	+	-	-	+	+	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

API ID32E

@ref	ODC	ADH (Arg)	LDC (Lys)	URE	LARL	GAT	5KG	LipaseLIP	Phenol red (Acidification)RP	beta GLU	MAN	MAL	ADO	PLE	beta GUR	MNT	IND	N-Acetyl-beta-Glucosaminidasebeta NAG	beta GAL	GLU	SAC	LARA	DARL	alpha GLU	alpha GAL	TRE	RHA	INO	CEL	SOR	alpha-MaltosidasealphaMAL	L-aspartic acid arylamidaseAspA
49775	+	-	-	-	-	+	-	-	-	+	+	+	-	-	-	-	+	-	+	+	-	+	-	-	-	+	+	-	-	-	-	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Food production	#Bottled, canned, packed food

Isolation

@ref	Sample type	Geographic location	Country	Continent
49775	Canned soup	Ceské Budéjovice	Czechoslovakia	Europe

Interaction and safety

Sequence information

Genome-based predictions

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#49775	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 29871
#68368	Automatically annotated from API 20E .
#68374	Automatically annotated from API ID32E .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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