Staphylococcus auricularis (CCUG 28813)

Name: Staphylococcus auricularis (CCUG 28813)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 145551

Type strain

Culture col. no. CCUG 28813

NCBI tax ID(s) 29379

Special Collections CCUG

Links

Staphylococcus auricularis CCUG 28813 is an aerobe, mesophilic prokaryote that was isolated from Ear.

aerobe mesophilic

Name and taxonomic classification

SI-ID 57186

CCUG 28813

@ref 20215

Last LPSN update 2025-12-16 10:04:53

Domain Bacillati

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Staphylococcaceae

Genus Staphylococcus

Species Staphylococcus auricularis

Full scientific name Staphylococcus auricularis Kloos and Schleifer 1983

BacDive ID	Other strains from **Staphylococcus auricularis** (4)	Type strain
14503	S. auricularis WK 811M, WK811M, LRA 013 01 83, DSM 20609, ... (type strain)
145552	S. auricularis CCUG 28814
145553	S. auricularis CCUG 28815
155928	S. auricularis CCUG 59667

Morphology

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
49400	positive	growth	37	mesophilic

Physiology and metabolism

Oxygen tolerance

49400

Oxygen toleranceaerobe

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68375	22599 ChEBI	arabinose	-	fermentation	from API ID32STA
68375	29016 ChEBI	arginine	+	hydrolysis	from API ID32STA
68375	17057 ChEBI	cellobiose	-	fermentation	from API ID32STA
68375	15824 ChEBI	D-fructose	+	fermentation	from API ID32STA
68375	17634 ChEBI	D-glucose	-	fermentation	from API ID32STA
68375	16899 ChEBI	D-mannitol	-	fermentation	from API ID32STA
68375	16024 ChEBI	D-mannose	-	fermentation	from API ID32STA
68375	16988 ChEBI	D-ribose	-	fermentation	from API ID32STA
68375	4853 ChEBI	esculin	-	hydrolysis	from API ID32STA
68375	17716 ChEBI	lactose	-	fermentation	from API ID32STA
68375	17306 ChEBI	maltose	-	fermentation	from API ID32STA
68375	59640 ChEBI	N-acetylglucosamine	-	fermentation	from API ID32STA
68375	17632 ChEBI	nitrate	-	reduction	from API ID32STA
68375	18257 ChEBI	ornithine	-	degradation	from API ID32STA
68375	16634 ChEBI	raffinose	-	fermentation	from API ID32STA
68375	17992 ChEBI	sucrose	-	fermentation	from API ID32STA
68375	27082 ChEBI	trehalose	-	fermentation	from API ID32STA
68375	32528 ChEBI	turanose	-	fermentation	from API ID32STA
68375	16199 ChEBI	urea	-	hydrolysis	from API ID32STA

Antibiotic resistance

@ref	ChEBI	Metabolite	Is antibiotic	Is sensitive	Sensitivity conc.
68375	28368	novobiocin			1.8 µg	from API ID32STA

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68375	15688 ChEBI	acetoin		from API ID32STA

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test
68375	15688 ChEBI	acetoin	-	from API ID32STA

Enzymes

@ref	Value	Activity	Ec
68375	alkaline phosphatase	-	3.1.3.1	from API ID32STA
68375	arginine dihydrolase	+	3.5.3.6	from API ID32STA
68375	beta-galactosidase	-	3.2.1.23	from API ID32STA
68375	beta-glucosidase	-	3.2.1.21	from API ID32STA
68375	beta-glucuronidase	-	3.2.1.31	from API ID32STA
68375	L-arginine arylamidase	+		from API ID32STA
68375	ornithine decarboxylase	-	4.1.1.17	from API ID32STA
68375	pyrrolidonyl arylamidase	-	3.4.19.3	from API ID32STA
68375	urease	-	3.5.1.5	from API ID32STA

Pathway annotation

Computationally determined by

@ref	pathway	enzyme coverage	annotated reactions
66794	UDP-GlcNAc biosynthesis	100	3 of 3
66794	CDP-diacylglycerol biosynthesis	100	2 of 2
66794	teichoic acid biosynthesis	100	1 of 1
66794	adipate degradation	100	2 of 2
66794	ethanol fermentation	100	2 of 2
66794	coenzyme A metabolism	100	4 of 4
66794	acetate fermentation	100	4 of 4
66794	ppGpp biosynthesis	100	4 of 4
66794	pentose phosphate pathway	100	11 of 11
66794	acetoin degradation	100	3 of 3
66794	folate polyglutamylation	100	1 of 1
66794	anapleurotic synthesis of oxalacetate	100	1 of 1
66794	ribulose monophosphate pathway	100	2 of 2
66794	vitamin K metabolism	100	5 of 5
66794	palmitate biosynthesis	95.45	21 of 22
66794	peptidoglycan biosynthesis	93.33	14 of 15
66794	vitamin B1 metabolism	92.31	12 of 13
66794	valine metabolism	88.89	8 of 9
66794	chorismate metabolism	88.89	8 of 9
66794	gluconeogenesis	87.5	7 of 8
66794	C4 and CAM-carbon fixation	87.5	7 of 8
66794	tetrahydrofolate metabolism	85.71	12 of 14
66794	lipoate biosynthesis	80	4 of 5
66794	threonine metabolism	80	8 of 10
66794	flavin biosynthesis	80	12 of 15
66794	photosynthesis	78.57	11 of 14
66794	molybdenum cofactor biosynthesis	77.78	7 of 9
66794	sulfopterin metabolism	75	3 of 4
66794	ketogluconate metabolism	75	6 of 8
66794	butanoate fermentation	75	3 of 4
66794	cardiolipin biosynthesis	71.43	5 of 7
66794	reductive acetyl coenzyme A pathway	71.43	5 of 7
66794	heme metabolism	71.43	10 of 14
66794	glycolysis	70.59	12 of 17
66794	phenylalanine metabolism	69.23	9 of 13
66794	leucine metabolism	69.23	9 of 13
66794	purine metabolism	68.09	64 of 94
66794	glycolate and glyoxylate degradation	66.67	4 of 6
66794	CO2 fixation in Crenarchaeota	66.67	6 of 9
66794	cyanate degradation	66.67	2 of 3
66794	serine metabolism	66.67	6 of 9
66794	L-lactaldehyde degradation	66.67	2 of 3
66794	enterobactin biosynthesis	66.67	2 of 3
66794	alanine metabolism	65.52	19 of 29
66794	pyrimidine metabolism	64.44	29 of 45
66794	isoleucine metabolism	62.5	5 of 8
66794	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	62.5	5 of 8
66794	degradation of sugar alcohols	62.5	10 of 16
66794	urea cycle	61.54	8 of 13
66794	NAD metabolism	61.11	11 of 18
66794	glutamate and glutamine metabolism	60.71	17 of 28
66794	gallate degradation	60	3 of 5
66794	starch degradation	60	6 of 10
66794	methylglyoxal degradation	60	3 of 5
66794	glycogen metabolism	60	3 of 5
66794	methionine metabolism	57.69	15 of 26
66794	oxidative phosphorylation	57.14	52 of 91
66794	citric acid cycle	57.14	8 of 14
66794	cysteine metabolism	55.56	10 of 18
66794	aspartate and asparagine metabolism	55.56	5 of 9
66794	proline metabolism	54.55	6 of 11
66794	metabolism of disaccharids	54.55	6 of 11
66794	lysine metabolism	52.38	22 of 42
66794	biotin biosynthesis	50	2 of 4
66794	phenylmercury acetate degradation	50	1 of 2
66794	non-pathway related	50	19 of 38
66794	tryptophan metabolism	50	19 of 38
66794	Entner Doudoroff pathway	50	5 of 10
66794	CMP-KDO biosynthesis	50	2 of 4
66794	suberin monomers biosynthesis	50	1 of 2
66794	glycine metabolism	50	5 of 10
66794	cis-vaccenate biosynthesis	50	1 of 2
66794	glycogen biosynthesis	50	2 of 4
66794	dolichol and dolichyl phosphate biosynthesis	50	1 of 2
66794	arginine metabolism	45.83	11 of 24
66794	d-mannose degradation	44.44	4 of 9
66794	mevalonate metabolism	42.86	3 of 7
66794	glutathione metabolism	42.86	6 of 14
66794	propanol degradation	42.86	3 of 7
66794	degradation of aromatic, nitrogen containing compounds	41.67	5 of 12
66794	histidine metabolism	41.38	12 of 29
66794	metabolism of amino sugars and derivatives	40	2 of 5
66794	propionate fermentation	40	4 of 10
66794	4-hydroxyphenylacetate degradation	40	4 of 10
66794	degradation of pentoses	39.29	11 of 28
66794	lipid metabolism	38.71	12 of 31
66794	isoprenoid biosynthesis	38.46	10 of 26
66794	dTDPLrhamnose biosynthesis	37.5	3 of 8
66794	vitamin B6 metabolism	36.36	4 of 11
66794	tyrosine metabolism	35.71	5 of 14
66794	(5R)-carbapenem carboxylate biosynthesis	33.33	1 of 3
66794	octane oxidation	33.33	1 of 3
66794	lipid A biosynthesis	33.33	3 of 9
66794	IAA biosynthesis	33.33	1 of 3
66794	acetyl CoA biosynthesis	33.33	1 of 3
66794	formaldehyde oxidation	33.33	1 of 3
66794	pantothenate biosynthesis	33.33	2 of 6
66794	selenocysteine biosynthesis	33.33	2 of 6
66794	degradation of hexoses	33.33	6 of 18
66794	myo-inositol biosynthesis	30	3 of 10
66794	arachidonic acid metabolism	27.78	5 of 18
66794	d-xylose degradation	27.27	3 of 11
66794	androgen and estrogen metabolism	25	4 of 16
66794	phenol degradation	25	5 of 20
66794	carnitine metabolism	25	2 of 8
66794	toluene degradation	25	1 of 4
66794	cyclohexanol degradation	25	1 of 4
66794	lactate fermentation	25	1 of 4
66794	nitrate assimilation	22.22	2 of 9
66794	polyamine pathway	21.74	5 of 23

Fatty acid profile

Metadata FA analysis

@ref

49400

Fatty acid	Percentage	ECL
C15:0 ANTEISO	64	14.711
C19:0 ANTEISO	10	18.729
C15:0 ISO	6	14.621
C19:0 ISO	5.4	18.633
C20:0	3.9	20
C17:0 anteiso	2.4	16.722
C20:0 ISO	1.9	19.635
C14:0 ISO	1.9	13.618
C18:0	1.4	18
C18:2 ω6,9c/C18:0 ANTE	1.3	17.724
C17:0 iso	1	16.629
C20:2 ω6,9c	1	19.735

API ID32STA

@ref	URE	ADH (Arg)	ODC	ESC	GLU	FRU	MNE	MAL	LAC	TRE	MAN	RAF	RIB	CEL	Reduction of nitrateNIT	Acetoin production (Voges Proskauer test)VP	beta GAL	L-arginine arylamidaseArgA	PAL	Pyrrolidonyl arylamidasePyrA	NOVO	SAC	NAG	TUR	ARA	beta GUR
49400	-	+	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host Body-Site	#Organ	#Ear

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
49400	Ear	Lyon	France	FRA	Europe

Interaction and safety

Sequence information

Genome-based predictions

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#49400	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 28813
#66794	Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
#68375	Automatically annotated from API ID32STA .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Staphylococcus auricularis (CCUG 28813)

Name and taxonomic classification

Morphology