Gracilinema caldarium H1 is an anaerobe, thermophilic, Gram-negative bacterium that was isolated from cyanobacterial mat of freshwater hot spring.
- Gram-negative
- motile
- spiral-shaped
- anaerobe
- thermophilic
- Bacteria
- genome sequence
- Information on the name and the taxonomic classification. Name and taxonomic classification
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- Information on morphological and physiological properties Morphology
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[Ref.: #66793] Caption: electron microscopic image [Ref.: #66793] Intellectual property rights: © HZI/Manfred Rohde
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- Information on culture and growth conditions Culture and growth conditions
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- Information on physiology and metabolism Physiology and metabolism
- Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information
- Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information
- Information on genomic background e.g. entries in nucleic sequence databass Sequence information
- Data predicted using genome information as a basis Genome-based predictions
- Availability in culture collections External links
- References
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#2903 Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 7334 -
#20215 Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) -
#43420 Birte Abt, Markus Goeker, Carmen Scheuner, Cliff Han, Megan Lu, Monica Misra, Alla Lapidus, Matt Nolan, Susan Lucas, Nancy Hammon, Shweta Deshpande, Jan-Fang Cheng, Roxanne Tapia, Lynne A. Goodwin, Sam Pitluck, Konstantinos Liolios, Ioanna Pagani, Natalia Ivanova, Konstantinos Mavromatis, Natalia Mikhailova, Marcel Huntemann, Amrita Pati, Amy Chen, Krishna Palaniappan, Miriam Land, Loren Hauser, Cynthia D. Jeffries, Manfred Rohde, Stefan Spring, Sabine Gronow, John C. Detter, James Bristow, Jonathan A. Eisen, Victor Markowitz, Philip Hugenholtz, Nikos C. Kyrpides, Tanja Woyke, Hans-Peter Klenk: Genome sequence of the thermophilic fresh-water bacterium Spirochaeta caldaria type strain (H1 T ), reclassification of Spirochaeta caldaria, Spirochaeta stenostrepta, and Spirochaeta zuelzerae in the genus Treponema as Treponema caldaria comb. nov., Treponema stenostrepta comb. nov., and Treponema zuelzerae comb. nov., and emendation of the genus Treponema. Stand Genomic Sci 8: 88 - 105 2013 ( DOI 10.4056/sigs.3096473 , PubMed 23961314 ) -
#66792 Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . -
#66793 Mukherjee et al.: GEBA: 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life. 35: 676 - 683 2017 ( DOI 10.1038/nbt.3886 , PubMed 28604660 ) -
#66794 Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 ) -
#68380 Automatically annotated from API rID32A . -
#69480 Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . -
#69481 Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 ) - * These data were automatically processed and therefore are not curated
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