Name: Treponema stenostreptum Z1
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 14320

Type strain:

Species: Treponema stenostreptum

Strain Designation: Z1

Culture col. no.: DSM 2028, ATCC 25083, JCM 16534

Strain history: DSM 2028 <-- E. Canal-Parola strain Z1.

NCBI tax ID(s): 152 (species)

Section

Treponema stenostreptum Z1 is an anaerobe, mesophilic bacterium that was isolated from black mud, fresh water pond.

anaerobe
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Spirochaetota*
	Class	*Spirochaetia*
	Order	*Spirochaetales*
	Family	*Treponemataceae*
	Genus	*Treponema*
	Species	**Treponema stenostreptum**
	Full Scientific Name (LPSN)	Treponema stenostreptum corrig. (Zuelzer 1912) Abt et al. 2013

	Synonym	Zuelzera stenostrepta
	Synonym	Spirochaeta stenostrepta
	Synonym	Spirochaeta stenostreptum
	Synonym	Treponema stenostrepta

Information on culture and growth conditions Culture and growth conditions

[Ref.: #961]

Culture medium

ZUELZERA MEDIUM (DSMZ Medium 174)

[Ref.: #961]

Culture medium growth

[Ref.: #961]

Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #961]			growth	30 °C
[Ref.: #67770]			growth	30 °C

[Ref.: #961]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #961]

Oxygen tolerance

anaerobe

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #961]	Sample type/isolated from	black mud, fresh water pond
[Ref.: #961]	Geographic location (country and/or sea, region)	Massachusetts, Amherst
[Ref.: #961]	Country	USA
[Ref.: #961]	Country ISO 3 Code	USA
[Ref.: #961]	Continent	North America

[Ref.: #67770]	Sample type/isolated from	Mud of a fresh-water pond
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Freshwater
#Environmental	#Terrestrial	#Mud (Sludge)
#Environmental	#Aquatic	#Pond (small)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence FR733664 (>99% sequence identity) for Treponema stenostreptum subclade from Microbeatlas

Aquatic Samples	943
Soil Samples	972
Animal Samples	62
Plant Samples	726
Total Samples	2703

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #961]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #961]	Spirochaeta stenostrepta partial 16S rRNA gene, type strain DSM2028T	FR733664	1528	ENA	152 tax ID
[Ref.: #20218]	Treponema succinifaciens DSM 2489 strain 6091 16S ribosomal RNA gene, partial sequence	M57738	1510	ENA	869209 tax ID	*
[Ref.: #20218]	Spirochaeta stenostrepta gene for 16S ribosomal RNA, partial sequence, strain: JCM 16534	AB541984	1502	ENA	152 tax ID	*

Availability in culture collections External links

[Ref.: #961]

Culture collection no.

DSM 2028, ATCC 25083, JCM 16534

References

#961	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 2028

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

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