Strain identifier

BacDive ID: 14320

Type strain: Yes

Species: Treponema stenostreptum

Strain Designation: Z1

Culture col. no.: DSM 2028, ATCC 25083

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General

@ref: 961

BacDive-ID: 14320

DSM-Number: 2028

keywords: anaerobe, Bacteria, 16S sequence, mesophilic

description: Treponema stenostreptum Z1 is an anaerobe, mesophilic bacterium that was isolated from black mud, fresh water pond.

strain history: <- E. Canale-Parola; Z1

doi: 10.13145/bacdive14320.20201210.5

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/spirochaetes
  • domain: Bacteria
  • phylum: Spirochaetes
  • class: Spirochaetes
  • order: Spirochaetales
  • family: Treponemataceae
  • genus: Treponema
  • species: Treponema stenostreptum
  • full scientific name: Treponema stenostreptum corrig. (Zuelzer 1912) Abt et al. 2013
  • synonyms

    @refsynonym
    20215Spirochaeta stenostrepta
    20215Spirochaeta stenostreptum
    20215Treponema stenostrepta

@ref: 961

domain: Bacteria

phylum: Spirochaetes

class: Spirochaetes

order: Spirochaetales

family: Spirochaetaceae

genus: Treponema

species: Treponema stenostreptum

full scientific name: Treponema stenostreptum (Zuelzer 1912) Abt et al. 2013

strain designation: Z1

type strain: yes

Culture and growth conditions

culture medium

  • @ref: 961
  • name: TREPONEMA STENOSTREPTUM MEDIUM (DSMZ Medium 174), anaerobic
  • growth: yes
  • link: https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium174.pdf

culture temp

  • @ref: 961
  • growth: positive
  • type: growth
  • temperature: 30
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 961
  • oxygen tolerance: anaerobe

Isolation, sampling and environmental information

isolation

  • @ref: 961
  • sample type: black mud, fresh water pond
  • geographic location: Massachusetts, Amherst
  • country: USA
  • origin.country: USA
  • continent: North America

isolation source categories

Cat1Cat2Cat3
#Environmental#Aquatic#Freshwater
#Environmental#Aquatic#Mud (Sludge)
#Environmental#Aquatic#Pond (small)

Safety information

risk assessment

  • @ref: 961
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Treponema succinifaciens DSM 2489 strain 6091 16S ribosomal RNA gene, partial sequenceM577381510ena869209
20218Spirochaeta stenostrepta gene for 16S ribosomal RNA, partial sequence, strain: JCM 16534AB5419841502ena152
961Spirochaeta stenostrepta partial 16S rRNA gene, type strain DSM2028TFR7336641528ena152

External links

@ref: 961

culture collection no.: DSM 2028, ATCC 25083

straininfo link

@refpassport
20218http://www.straininfo.net/strains/157684
20218http://www.straininfo.net/strains/103638

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
961Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 2028)https://www.dsmz.de/collection/catalogue/details/culture/DSM-2028
20215D.Gleim, M.Kracht, N.Weiss et. al.http://www.dsmz.de/bacterial-diversity/prokaryotic-nomenclature-up-to-date.htmlProkaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274