Name: Parageobacillus thermoglucosidasius KP 1006
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 1430

Type strain:

Species: Parageobacillus thermoglucosidasius

Strain Designation: KP 1006, R-35637, NRS-81

Culture col. no.: DSM 2542, ATCC 43742, NCIB 11955, CCUG 28887, NRRL B-14233, CIP 106930, NRRL B-14516, NCIMB 11955

Strain history: CIP <- 2001, CCUG <- 1991, L.K. Nakamura, NRRL, Peoria, USA: strain NRS-81

NCBI tax ID(s): 1426 (species)

SI-ID 12264

LMG 17914, ATCC 43742, CCM 3731, DSM 2542, LMG 7137, NCIMB 11955, CCUG 28887, NRRL B-14233, CIP 106930, NCIB 11955, CECT 4038, CCRC 14687, KCTC 1828, KCTC 3400, BCRC 14687, NRRL B-14516, CECT 7250

Other strains from Parageobacillus thermoglucosidasius

P. thermoglucosidasius KP 1022, R-32629, DSM 2543
P. thermoglucosidasius PB94A, DSM 21625
P. thermoglucosidasius DSM 6285, ATCC 67824, BR 219
P. thermoglucosidasius JCM 31848

Section

Parageobacillus thermoglucosidasius KP 1006 is a facultative anaerobe, spore-forming, mesophilic bacterium that forms circular colonies and was isolated from soil.

colony-forming
Gram-positive
motile
rod-shaped
spore-forming
facultative anaerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Bacillaceae*
	Genus	*Parageobacillus*
	Species	**Parageobacillus thermoglucosidasius**
	Full Scientific Name (LPSN)	Parageobacillus thermoglucosidasius (Suzuki 1984) Aliyu et al. 2019

	Synonym	"Parageobacillus* thermoglucosidasius"*
	Synonym	Bacillus thermoglucosidasius
	Synonym	Geobacillus thermoglucosidans
	Synonym	Geobacillus thermoglucosidasius

Information on morphological and physiological properties Morphology

[Ref.: #23042]	Gram stain	positive
[Ref.: #123506]	Gram stain	positive

[Ref.: #23042]	Cell length	3.0-7.0 µm

[Ref.: #23042]	Cell width	0.5-1.2 µm

[Ref.: #23042]	Cell shape	rod-shaped
[Ref.: #123506]	Cell shape	rod-shaped

[Ref.: #23042]	Motility	yes
[Ref.: #123506]	Motility	yes

[Ref.: #23042]	Flagellum arrangement	peritrichous

[Ref.: #23042]	Colony size	0.5-5.0 mm
[Ref.: #23042]	Colony color	faintly brown
[Ref.: #23042]	Colony shape	circular
[Ref.: #23042]	Incubation period	1-2 days
[Ref.: #23042]	Cultivation medium used	trypticase soy agar

Information on culture and growth conditions Culture and growth conditions

[Ref.: #23042]

Culture medium

trypticase soy agar

[Ref.: #23042]

Culture medium growth

[Ref.: #1116]

Culture medium

BACILLUS THERMOGLUCOSIDASIUS MEDIUM (DSMZ Medium 305)

[Ref.: #1116]

Culture medium growth

[Ref.: #1116]

Culture medium link

Medium recipe at MediaDive

[Ref.: #1116]

Culture medium composition

expand / minimize

[Ref.: #40602]

Culture medium

MEDIUM 370 - for Bacillus thermoglucosidasius

[Ref.: #40602]

Culture medium growth

[Ref.: #40602]

Culture medium composition

expand / minimize

[Ref.: #1116]

Culture medium

NUTRIENT AGAR (DSMZ Medium 1)

[Ref.: #1116]

Culture medium growth

[Ref.: #1116]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #123506]

Culture medium

CIP Medium 370

[Ref.: #123506]

Culture medium growth

[Ref.: #123506]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #1116]		growth	55 °C
[Ref.: #23042]	no	growth	37.0 °C
[Ref.: #23042]	no	growth	60.0 °C
[Ref.: #23042]		maximum	<60.0 °C
[Ref.: #23042]		minimum	40.0 °C
[Ref.: #23042]		optimum	50.0 °C
[Ref.: #40602]		growth	55 °C
[Ref.: #49444]		growth	56 °C
[Ref.: #123506]		growth	45-55 °C
[Ref.: #123506]	no	growth	10 °C
[Ref.: #123506]	no	growth	22 °C
[Ref.: #123506]	no	growth	30 °C
[Ref.: #123506]	no	growth	37 °C

[Ref.: #1116]	Temperature range	thermophilic
[Ref.: #23042]	Temperature range	mesophilic
[Ref.: #23042]	Temperature range	thermophilic
[Ref.: #40602]	Temperature range	thermophilic
[Ref.: #49444]	Temperature range	thermophilic
[Ref.: #123506]	Temperature range	thermophilic
[Ref.: #123506]	Temperature range	psychrophilic
[Ref.: #123506]	Temperature range	mesophilic

	Kind of pH		pH
[Ref.: #23042]		optimum	8.0
[Ref.: #23042]		growth	7.0
[Ref.: #23042]	no	growth	9.0
[Ref.: #23042]	no	growth	6.0
[Ref.: #23042]	no	growth	5.0
[Ref.: #123506]	no	growth	6

Information on physiology and metabolism Physiology and metabolism

[Ref.: #23042]	Oxygen tolerance	facultative anaerobe
[Ref.: #49444]	Oxygen tolerance	aerobe
[Ref.: #123506]	Oxygen tolerance	facultative anaerobe

[Ref.: #23042]	Spore description	short ellipsoidal,subterminal and terminal,in swollen sporangia
[Ref.: #23042]	Type of spore	endospore
[Ref.: #23042]	Ability of spore formation	yes
[Ref.: #123506]	Ability of spore formation	yes

[Ref.: #1116]

Name of produced compound

exo-oligo-1,6 glucosidase

	Salt	Tested relation		Salt conc.
[Ref.: #23042]	NaCl		growth	<0.5	%
[Ref.: #23042]	NaCl	no	growth	1.0	%(w/v)
[Ref.: #23042]	NaCl	no	growth	5.0	%(w/v)
[Ref.: #123506]	NaCl		growth	0	%
[Ref.: #123506]	NaCl	no	growth	2	%
[Ref.: #123506]	NaCl	no	growth	4	%
[Ref.: #123506]	NaCl	no	growth	6	%
[Ref.: #123506]	NaCl	no	growth	8	%
[Ref.: #123506]	NaCl	no	growth	10	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #23042]	2-dehydro-D-gluconate ChEBI	-	builds acid from
[Ref.: #23042]	5-dehydro-D-gluconate ChEBI	-	builds acid from
[Ref.: #23042]	amygdalin ChEBI	-	builds gas from
[Ref.: #23042]	amygdalin ChEBI	+	builds acid from
[Ref.: #68371]	amygdalin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23042]	arbutin ChEBI	-	builds gas from
[Ref.: #23042]	arbutin ChEBI	+	builds acid from
[Ref.: #68371]	arbutin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23042]	casein	-	hydrolysis
[Ref.: #23042]	cellobiose ChEBI	-	builds gas from
[Ref.: #23042]	cellobiose ChEBI	+	builds acid from
[Ref.: #68371]	cellobiose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23042]	citrate ChEBI	-	carbon source
[Ref.: #23042]	D-arabinose ChEBI	-	builds acid from
[Ref.: #68371]	D-arabinose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23042]	D-arabitol ChEBI	-	builds acid from
[Ref.: #68371]	D-arabitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23042]	D-fructose ChEBI	-	builds gas from
[Ref.: #23042]	D-fructose ChEBI	+	builds acid from
[Ref.: #68371]	D-fructose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23042]	D-fucose ChEBI	-	builds acid from
[Ref.: #68371]	D-fucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-galactose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23042]	D-glucose ChEBI	-	builds gas from
[Ref.: #23042]	D-glucose ChEBI	+	builds acid from
[Ref.: #68371]	D-glucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23042]	D-lyxose ChEBI	-	builds acid from
[Ref.: #68371]	D-lyxose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-mannitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23042]	D-mannose ChEBI	-	builds gas from
[Ref.: #23042]	D-mannose ChEBI	+	builds acid from
[Ref.: #68371]	D-mannose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-ribose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-sorbitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23042]	D-tagatose ChEBI	-	builds acid from
[Ref.: #68371]	D-tagatose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23042]	D-xylose ChEBI	-	builds gas from
[Ref.: #23042]	D-xylose ChEBI	+	builds acid from
[Ref.: #68371]	D-xylose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23042]	erythritol ChEBI	-	builds acid from
[Ref.: #68371]	erythritol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23042]	esculin ChEBI	+	hydrolysis
[Ref.: #123506]	esculin ChEBI	+	hydrolysis
[Ref.: #68371]	esculin ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23042]	galactitol ChEBI	-	builds acid from
[Ref.: #68371]	galactitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23042]	galactose ChEBI	-	builds acid from
[Ref.: #23042]	gelatin ChEBI	+	hydrolysis
[Ref.: #23042]	gentiobiose ChEBI	-	builds gas from
[Ref.: #23042]	gentiobiose ChEBI	+	builds acid from
[Ref.: #68371]	gentiobiose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23042]	gluconate ChEBI	-	builds acid from
[Ref.: #68371]	gluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23042]	glycerol ChEBI	-	builds gas from
[Ref.: #23042]	glycerol ChEBI	+	builds acid from
[Ref.: #68371]	glycerol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23042]	glycogen ChEBI	-	builds acid from
[Ref.: #68371]	glycogen ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #123506]	hippurate ChEBI	-	hydrolysis
[Ref.: #23042]	inulin ChEBI	-	builds acid from
[Ref.: #68371]	inulin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23042]	L-arabinose ChEBI	-	builds gas from
[Ref.: #23042]	L-arabinose ChEBI	+	builds acid from
[Ref.: #68371]	L-arabinose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23042]	L-arabitol ChEBI	-	builds acid from
[Ref.: #68371]	L-arabitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23042]	L-fucose ChEBI	-	builds acid from
[Ref.: #68371]	L-fucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-rhamnose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23042]	L-sorbose ChEBI	-	builds gas from
[Ref.: #23042]	L-sorbose ChEBI	+	builds acid from
[Ref.: #68371]	L-sorbose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23042]	L-xylose ChEBI	-	builds acid from
[Ref.: #68371]	L-xylose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23042]	lactose ChEBI	-	builds gas from
[Ref.: #23042]	lactose ChEBI	+	builds acid from
[Ref.: #68371]	lactose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23042]	maltose ChEBI	-	builds gas from
[Ref.: #23042]	maltose ChEBI	+	builds acid from
[Ref.: #68371]	maltose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23042]	mannitol ChEBI	-	builds gas from
[Ref.: #23042]	mannitol ChEBI	+	builds acid from
[Ref.: #23042]	melezitose ChEBI	-	builds acid from
[Ref.: #68371]	melezitose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23042]	melibiose ChEBI	-	builds acid from
[Ref.: #68371]	melibiose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	methyl alpha-D-glucopyranoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	methyl alpha-D-mannoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	methyl beta-D-xylopyranoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23042]	methyl D-glucoside ChEBI	-	builds gas from
[Ref.: #23042]	methyl D-glucoside ChEBI	+	builds acid from
[Ref.: #23042]	myo-inositol ChEBI	-	builds acid from
[Ref.: #68371]	myo-inositol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23042]	N-acetylglucosamine ChEBI	-	builds gas from
[Ref.: #23042]	N-acetylglucosamine ChEBI	+	builds acid from
[Ref.: #68371]	N-acetylglucosamine ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23042]	nitrate ChEBI	-	reduction
[Ref.: #123506]	nitrate ChEBI	+	reduction
[Ref.: #123506]	nitrate ChEBI	+	respiration
[Ref.: #123506]	nitrite ChEBI	+	reduction
[Ref.: #23042]	O-nitrophenyl-beta-D-galactopyranosid	-	hydrolysis
[Ref.: #68371]	Potassium 2-ketogluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	Potassium 5-ketogluconate ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23042]	raffinose ChEBI	-	builds acid from
[Ref.: #68371]	raffinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23042]	rhamnose ChEBI	-	builds gas from
[Ref.: #23042]	rhamnose ChEBI	+	builds acid from
[Ref.: #23042]	ribitol ChEBI	-	builds acid from
[Ref.: #68371]	ribitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23042]	ribose ChEBI	-	builds gas from
[Ref.: #23042]	ribose ChEBI	+	builds acid from
[Ref.: #23042]	salicin ChEBI	-	builds gas from
[Ref.: #23042]	salicin ChEBI	+	builds acid from
[Ref.: #68371]	salicin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23042]	sorbitol ChEBI	-	builds gas from
[Ref.: #23042]	sorbitol ChEBI	+	builds acid from
[Ref.: #23042]	starch ChEBI	-	builds gas from
[Ref.: #23042]	starch ChEBI	+	builds acid from
[Ref.: #23042]	starch ChEBI	+	hydrolysis
[Ref.: #68371]	starch ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23042]	sucrose ChEBI	-	builds gas from
[Ref.: #23042]	sucrose ChEBI	+	builds acid from
[Ref.: #68371]	sucrose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23042]	trehalose ChEBI	-	builds gas from
[Ref.: #23042]	trehalose ChEBI	+	builds acid from
[Ref.: #68371]	trehalose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23042]	tryptophan ChEBI	-	energy source
[Ref.: #23042]	turanose ChEBI	-	builds gas from
[Ref.: #23042]	turanose ChEBI	+	builds acid from
[Ref.: #68371]	turanose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23042]	xylitol ChEBI	-	builds acid from
[Ref.: #68371]	xylitol ChEBI	-	builds acid from	* from API 50CH acid
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Production
[Ref.: #23042]	acetoin ChEBI	no
[Ref.: #23042]	hydrogen sulfide ChEBI	no
[Ref.: #23042]	indole ChEBI	no
[Ref.: #123506]	indole ChEBI	no

	Metabolite	Voges-Proskauer-test	Methylred-test	Indole test	Citrate test
[Ref.: #23042]	acetoin ChEBI	-
[Ref.: #123506]	acetoin ChEBI	-
[Ref.: #23042]	citrate ChEBI				-
[Ref.: #123506]	glucose ChEBI		+
[Ref.: #23042]	indole ChEBI			-

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #123506]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	+	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #123506]	amylase	-
[Ref.: #23042]	arginine dihydrolase	-	3.5.3.6
[Ref.: #123506]	beta-galactosidase	-	3.2.1.23
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #123506]	caseinase	+	3.4.21.50
[Ref.: #23042]	catalase	+	1.11.1.6
[Ref.: #123506]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #23042]	cytochrome oxidase	+	1.9.3.1
[Ref.: #123506]	DNase	-
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #123506]	gamma-glutamyltransferase	-	2.3.2.2
[Ref.: #123506]	gelatinase	-
[Ref.: #68382]	leucine arylamidase	-	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #23042]	lysine decarboxylase	-	4.1.1.18
[Ref.: #123506]	lysine decarboxylase	-	4.1.1.18
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	-		* from API zym
[Ref.: #123506]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #123506]	oxidase	-
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #23042]	tryptophan deaminase	-	4.1.99.1
[Ref.: #123506]	tween esterase	-
[Ref.: #23042]	urease	-	3.5.1.5
[Ref.: #123506]	urease	-	3.5.1.5
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® 50CH acid:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	Acid from glycerolGLY	Acid from erythritolERY	Acid from D-arabinoseDARA	Acid from L-arabinoseLARA	Acid from D-riboseRIB	Acid from D-xyloseDXYL	Acid from L-xyloseLXYL	Acid from D-adonitolADO	Acid from methyl beta-D-xylopyranosideMDX	Acid from D-galactoseGAL	Acid from D-glucoseGLU	Acid from D-fructoseFRU	Acid from D-mannoseMNE	Acid from L-sorboseSBE	Acid from L-rhamnoseRHA	Acid from dulcitolDUL	Acid from inositolINO	Acid from D-mannitolMAN	Acid from D-sorbitolSOR	Acid from methyl alpha-D-mannopyranosideMDM	Acid from methyl alpha-D-glucopyranosideMDG	Acid from N-acetyl-glucosamineNAG	Acid from amygdalinAMY	Acid from arbutinARB	Acid from esculinESC	Acid from salicinSAL	Acid from cellobioseCEL	Acid from maltoseMAL	Acid from lactoseLAC	Acid from melibioseMEL	Acid from sucroseSAC	Acid from trehaloseTRE	Acid from inulinINU	Acid from melezitoseMLZ	Acid from raffinoseRAF	Acid from starchAMD	Acid from glycogenGLYG	Acid from xylitolXLT	Acid from gentiobioseGEN	Acid from turanoseTUR	Acid from D-lyxoseLYX	Acid from D-tagatoseTAG	Acid from D-fucoseDFUC	Acid from L-fucoseLFUC	Acid from D-arabitolDARL	Acid from L-arabitolLARL	Acid from gluconateGNT	Acid from 2-Ketogluconate2KG	Acid from 5-Ketogluconate5KG
[Ref.: #123506]	10762	not determinedn.d.	-	-	+	+	+	+	+	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	+	-	-	-	-	-	-	+

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #123506]	9918	-	+	+	+	-	-	-	-	-	-	+	-	-	-	-	+	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #1116]	Sample type/isolated from	soil
[Ref.: #1116]	Geographic location (country and/or sea, region)	Kyoto, Shimogamo
[Ref.: #1116]	Country	Japan
[Ref.: #1116]	Country ISO 3 Code	JPN
[Ref.: #1116]	Continent	Asia

[Ref.: #49444]	Sample type/isolated from	Soil

[Ref.: #123506]	Sample type/isolated from	Environment, Soil
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence FN428685 (>99% sequence identity) for Bacillaceae from Microbeatlas

Aquatic Samples	2043
Soil Samples	4724
Animal Samples	5920
Plant Samples	1962
Total Samples	14649

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #1116]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #123506]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #1116]	Geobacillus thermoglucosidasius partial 16S rRNA gene, strain R-35637	FN428685	1511	ENA	1426 tax ID
[Ref.: #20218]	Bacillus thermoglucosidasius gene for 16S ribosomal RNA	AB021197	1523	ENA	1426 tax ID	*
[Ref.: #20218]	Geobacillus thermoglucosidasius strain DSM 2542 16S-23S ribosomal RNA intergenic spacer and tRNA-Ile gene, partial sequence; and tRNA-Ala gene, complete sequence	EU157954	259	ENA	1426 tax ID	*
[Ref.: #20218]	Bacillus thermoglucosidasius 16S ribosomal RNA	X60641	1435	ENA	1426 tax ID	*
[Ref.: #20218]	Geobacillus thermoglucosidasius isolate Gtg15 16S ribosomal RNA gene, partial sequence; 16S-23S internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence	EU723644	503	ENA	1426 tax ID	*
[Ref.: #20218]	Geobacillus thermoglucosidasius isolate Gtg21 16S ribosomal RNA gene, partial sequence; 16S-23S internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence	EU723645	573	ENA	1426 tax ID	*
[Ref.: #20218]	Geobacillus thermoglucosidasius isolate Gtg33 16S ribosomal RNA gene, partial sequence; 16S-23S internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence	EU723646	479	ENA	1426 tax ID	*

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Parageobacillus thermoglucosidasius DSM 2542	GCA_001295365	complete	GenBank	1426 tax ID	*
[Ref.: #66792]	Parageobacillus thermoglucosidasius DSM 2542	GCA_000966225	contig	GenBank	1426 tax ID	*
[Ref.: #66792]	Parageobacillus thermoglucosidasius strain DSM 2542	1426.99	wgs	PATRIC	1426 tax ID	*
[Ref.: #66792]	Parageobacillus thermoglucosidasius strain DSM 2542	1426.100	complete	PATRIC	1426 tax ID	*
[Ref.: #66792]	Parageobacillus thermoglucosidasius DSM 2542	2627853848	draft	JGI IMG/M	1426 tax ID	*
[Ref.: #66792]	Parageobacillus thermoglucosidasius DSM 2542	2687453436	complete	JGI IMG/M	1426 tax ID	*

[Ref.: #1116]	GC-content	43.4 mol%	high performance liquid chromatography (HPLC)
[Ref.: #1116]	GC-content	45.0 mol%

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Parageobacillus thermoglucosidasius DSM 2542 NCBI: GCA_001295365.1
[Ref.: #69480]	motile	yes	87.691	yes
[Ref.: #69480]	flagellated	yes	82.718	no
[Ref.: #69480]	gram-positive	yes	83.954	no
[Ref.: #69480]	anaerobic	no	97.146	yes
[Ref.: #69480]	aerobic	yes	74.452	no
[Ref.: #69480]	halophile	no	93.1	no
[Ref.: #69480]	spore-forming	yes	96.621	yes
[Ref.: #69480]	glucose-util	yes	91.377	no
[Ref.: #69480]	thermophile	yes	99.399	no
[Ref.: #69480]	glucose-ferment	no	91.204	no

Availability in culture collections External links

[Ref.: #1116]

Culture collection no.

DSM 2542, ATCC 43742, NCIB 11955, CCUG 28887, NRRL B-14233, CIP 106930, NRRL B-14516, NCIMB 11955

[Ref.: #71080]

SI-ID 12264

Literature:

Only first 10 entries are displayed. Click here to see all.

	Title	Authors	Journal	DOI	Year
Metabolism	Relaxed control of sugar utilization in Parageobacillus thermoglucosidasius DSM 2542.	Liang J, Roberts A, van Kranenburg R, Bolhuis A, Leak DJ	Microbiol Res	10.1016/j.micres.2021.126957	2021	*
Metabolism	Metabolic engineering of Parageobacillus thermoglucosidasius for the efficient production of (2R, 3R)-butanediol.	Zhou J, Lian J, Rao CV	Appl Microbiol Biotechnol	10.1007/s00253-020-10553-8	2020	*
Enzymology	Biochemical characterization of a novel thermostable feruloyl esterase from Geobacillus thermoglucosidasius DSM 2542(T).	Ay Sal F, Colak DN, Guler HI, Canakci S, Belduz AO	Mol Biol Rep	10.1007/s11033-019-04893-6	2019	*
Metabolism	A design of experiments approach for the rapid formulation of a chemically defined medium for metabolic profiling of industrially important microbes.	Singleton C, Gilman J, Rollit J, Zhang K, Parker DA, Love J	PLoS One	10.1371/journal.pone.0218208	2019	*
Metabolism	Comparative genomic analysis of Parageobacillus thermoglucosidasius strains with distinct hydrogenogenic capacities.	Mohr T, Aliyu H, Kuchlin R, Zwick M, Cowan D, Neumann A, de Maayer P	BMC Genomics	10.1186/s12864-018-5302-9	2018	*
Metabolism	CO-dependent hydrogen production by the facultative anaerobe Parageobacillus thermoglucosidasius.	Mohr T, Aliyu H, Kuchlin R, Polliack S, Zwick M, Neumann A, Cowan D, de Maayer P	Microb Cell Fact	10.1186/s12934-018-0954-3	2018	*
Genetics	Complete Genome Sequence of Geobacillus thermoglucosidasius NCIMB 11955, the Progenitor of a Bioethanol Production Strain.	Sheng L, Zhang Y, Minton NP	Genome Announc	10.1128/genomeA.01065-16	2016	*
Genetics	Genome sequence of Geobacillus thermoglucosidasius DSM2542, a platform hosts for biotechnological applications with industrial potential.	Chen J, Zhang Z, Zhang C, Yu B	J Biotechnol	10.1016/j.jbiotec.2015.10.002	2015	*
Phylogeny	Isolation and characterization of two novel ethanol-tolerant facultative-anaerobic thermophilic bacteria strains from waste compost.	Fong JC, Svenson CJ, Nakasugi K, Leong CT, Bowman JP, Chen B, Glenn DR, Neilan BA, Rogers PL	Extremophiles	10.1007/s00792-006-0507-2	2006	*
Enzymology	Proline residues responsible for thermostability occur with high frequency in the loop regions of an extremely thermostable oligo-1,6-glucosidase from Bacillus thermoglucosidasius KP1006.	Watanabe K, Chishiro K, Kitamura K, Suzuki Y	J Biol Chem	S0021-9258(18)54226-5	1991	*
Enzymology	Primary structure of the oligo-1,6-glucosidase of Bacillus cereus ATCC7064 deduced from the nucleotide sequence of the cloned gene.	Watanabe K, Kitamura K, Iha H, Suzuki Y	Eur J Biochem	10.1111/j.1432-1033.1990.tb19267.x	1990	*
Enzymology	Purification and characterization of Bacillus coagulans oligo-1,6-glucosidase.	Suzuki Y, Tomura Y	Eur J Biochem	10.1111/j.1432-1033.1986.tb09723.x	1986	*
Phylogeny	Bacillus thermoglucosidasius sp. nov., a New Species of Obligately Thermophilic Bacilli.	Suzuki Y, Kishigami T, Inoue K, Mizoguchi Y, Eto N, Takagi M, Abe S	Syst Appl Microbiol	10.1016/S0723-2020(83)80006-X	1983	*
	Dynamic Control Strategy to Produce Riboflavin with Lignocellulose Hydrolysate in the Thermophile Geobacillus thermoglucosidasius.	Wang J, Li Z, Wang W, Pang S, Yao Y, Yuan F, Wang H, Xu Z, Pan G, Liu Z, Chen Y, Fan K	ACS Synth Biol	10.1021/acssynbio.2c00087	2022	*
	Removing carbon catabolite repression in Parageobacillus thermoglucosidasius DSM 2542.	Liang J, van Kranenburg R, Bolhuis A, Leak DJ	Front Microbiol	10.3389/fmicb.2022.985465	2022	*

References

#1116

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 2542

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#23042

An Coorevits,Anna E. Dinsdale,Gillian Halket,Liesbeth Lebbe,Paul De Vos,Anita Van Landschoot,Niall A. Logan: Taxonomic revision of the genus Geobacillus : emendation of Geobacillus , G. stearothermophilus , G. jurassicus , G. toebii , G. thermodenitrificans and G. thermoglucosidans (nom. corrig., formerly 'thermoglucosidasius'); transfer of Bacillus thermantarcticus to the genus as G. thermantarcticus comb. nov.; proposal of Caldibacillus debilis gen. nov., comb. nov.; transfer of G. tepidamans to Anoxybacillus as A. tepidamans comb. nov.; and proposal of Anoxybacillus caldiproteolyticus sp. nov.. IJSEM 62: 1470 - 1485 2012 ( DOI 10.1099/ijs.0.030346-0 , PubMed 21856988 )

#40602 ; Curators of the CIP;
#49444 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 28887

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#68371

Automatically annotated from API 50CH acid .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#71080

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID12264.1 )

#123506 Collection of Institut Pasteur ; Curators of the CIP; CIP 106930
* These data were automatically processed and therefore are not curated

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Parageobacillus thermoglucosidasius DSM 2542

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