Strain identifier
BacDive ID: 1430
Type strain:
Species: Parageobacillus thermoglucosidasius
Strain Designation: KP 1006, R-35637, NRS-81
Strain history: CIP <- 2001, CCUG <- 1991, L.K. Nakamura, NRRL, Peoria, USA: strain NRS-81
NCBI tax ID(s): 1426 (species)
General
@ref: 1116
BacDive-ID: 1430
DSM-Number: 2542
keywords: genome sequence, 16S sequence, Bacteria, facultative anaerobe, spore-forming, mesophilic, Gram-positive, motile, rod-shaped, colony-forming
description: Parageobacillus thermoglucosidasius KP 1006 is a facultative anaerobe, spore-forming, mesophilic bacterium that forms circular colonies and was isolated from soil.
NCBI tax id
- NCBI tax id: 1426
- Matching level: species
strain history
@ref | history |
---|---|
1116 | <- Y. Suzuki, KP 1006 (Bacillus thermoglucosidius) |
123506 | CIP <- 2001, CCUG <- 1991, L.K. Nakamura, NRRL, Peoria, USA: strain NRS-81 |
doi: 10.13145/bacdive1430.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Caryophanales
- family: Bacillaceae
- genus: Parageobacillus
- species: Parageobacillus thermoglucosidasius
- full scientific name: Parageobacillus thermoglucosidasius (Suzuki 1984) Aliyu et al. 2019
synonyms
@ref synonym 20215 Parageobacillus thermoglucosidasius 20215 Bacillus thermoglucosidasius 20215 Geobacillus thermoglucosidans 20215 Geobacillus thermoglucosidasius
@ref: 1116
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Bacillales
family: Bacillaceae
genus: Parageobacillus
species: Parageobacillus thermoglucosidasius
full scientific name: Parageobacillus thermoglucosidasius (Suzuki 1984) Aliyu et al. 2019
strain designation: KP 1006, R-35637, NRS-81
type strain: yes
Morphology
cell morphology
@ref | gram stain | cell length | cell width | cell shape | motility | flagellum arrangement |
---|---|---|---|---|---|---|
23042 | positive | 3.0-7.0 µm | 0.5-1.2 µm | rod-shaped | yes | peritrichous |
123506 | positive | rod-shaped | yes |
colony morphology
- @ref: 23042
- colony size: 0.5-5.0 mm
- colony color: faintly brown
- colony shape: circular
- incubation period: 1-2 days
- medium used: trypticase soy agar
Culture and growth conditions
culture medium
@ref | name | growth | link | composition |
---|---|---|---|---|
23042 | trypticase soy agar | yes | ||
1116 | BACILLUS THERMOGLUCOSIDASIUS MEDIUM (DSMZ Medium 305) | yes | https://mediadive.dsmz.de/medium/305 | Name: BACILLUS THERMOGLUCOSIDASIUS MEDIUM (DSMZ Medium 305) Composition: Agar 30.0 g/l Starch 10.0 g/l Peptone 5.0 g/l KH2PO4 3.0 g/l Yeast extract 3.0 g/l Meat extract 3.0 g/l Distilled water |
40602 | MEDIUM 370 - for Bacillus thermoglucosidasius | yes | Distilled water make up to (1000.000 ml);Agar (30.000 g);Yeast extract (3.000 g);Peptone (5.000 g);Potassium di-hydrogen phosphate (3.000 g);Starch maize (10.000g);Beef extract (3.000 g) | |
1116 | NUTRIENT AGAR (DSMZ Medium 1) | yes | https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium1.pdf | |
123506 | CIP Medium 370 | yes | https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=370 |
culture temp
@ref | growth | type | temperature | range |
---|---|---|---|---|
23042 | no | growth | 37.0 | mesophilic |
23042 | no | growth | 60.0 | thermophilic |
23042 | maximum | <60.0 | thermophilic | |
23042 | minimum | 40.0 | thermophilic | |
23042 | positive | optimum | 50.0 | thermophilic |
1116 | positive | growth | 55 | thermophilic |
40602 | positive | growth | 55 | thermophilic |
49444 | positive | growth | 56 | thermophilic |
123506 | positive | growth | 45-55 | thermophilic |
123506 | no | growth | 10 | psychrophilic |
123506 | no | growth | 22 | psychrophilic |
123506 | no | growth | 30 | mesophilic |
123506 | no | growth | 37 | mesophilic |
culture pH
@ref | ability | type | pH |
---|---|---|---|
23042 | positive | optimum | 8.0 |
23042 | positive | growth | 7.0 |
23042 | no | growth | 9.0 |
23042 | no | growth | 6.0 |
23042 | no | growth | 5.0 |
123506 | no | growth | 6 |
Physiology and metabolism
oxygen tolerance
@ref | oxygen tolerance |
---|---|
23042 | facultative anaerobe |
49444 | aerobe |
123506 | facultative anaerobe |
spore formation
@ref | spore description | type of spore | spore formation |
---|---|---|---|
23042 | short ellipsoidal,subterminal and terminal,in swollen sporangia | endospore | yes |
123506 | yes |
compound production
- @ref: 1116
- compound: exo-oligo-1,6 glucosidase
halophily
@ref | salt | growth | tested relation | concentration |
---|---|---|---|---|
23042 | NaCl | positive | growth | <0.5 % |
23042 | NaCl | no | growth | 1.0 %(w/v) |
23042 | NaCl | no | growth | 5.0 %(w/v) |
123506 | NaCl | positive | growth | 0 % |
123506 | NaCl | no | growth | 2 % |
123506 | NaCl | no | growth | 4 % |
123506 | NaCl | no | growth | 6 % |
123506 | NaCl | no | growth | 8 % |
123506 | NaCl | no | growth | 10 % |
metabolite utilization
@ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
---|---|---|---|---|
23042 | 16808 | 2-dehydro-D-gluconate | - | builds acid from |
23042 | 17426 | 5-dehydro-D-gluconate | - | builds acid from |
23042 | 15963 | ribitol | - | builds acid from |
23042 | 17108 | D-arabinose | - | builds acid from |
23042 | 18333 | D-arabitol | - | builds acid from |
23042 | 28847 | D-fucose | - | builds acid from |
23042 | 62318 | D-lyxose | - | builds acid from |
23042 | 16443 | D-tagatose | - | builds acid from |
23042 | 16813 | galactitol | - | builds acid from |
23042 | 17113 | erythritol | - | builds acid from |
23042 | 28260 | galactose | - | builds acid from |
23042 | 24265 | gluconate | - | builds acid from |
23042 | 28087 | glycogen | - | builds acid from |
23042 | 15443 | inulin | - | builds acid from |
23042 | 18403 | L-arabitol | - | builds acid from |
23042 | 18287 | L-fucose | - | builds acid from |
23042 | 65328 | L-xylose | - | builds acid from |
23042 | 6731 | melezitose | - | builds acid from |
23042 | 28053 | melibiose | - | builds acid from |
23042 | 17268 | myo-inositol | - | builds acid from |
23042 | 16634 | raffinose | - | builds acid from |
23042 | 17151 | xylitol | - | builds acid from |
23042 | 27613 | amygdalin | - | builds gas from |
23042 | 18305 | arbutin | - | builds gas from |
23042 | 17057 | cellobiose | - | builds gas from |
23042 | 15824 | D-fructose | - | builds gas from |
23042 | 17634 | D-glucose | - | builds gas from |
23042 | 16024 | D-mannose | - | builds gas from |
23042 | 65327 | D-xylose | - | builds gas from |
23042 | 28066 | gentiobiose | - | builds gas from |
23042 | 17754 | glycerol | - | builds gas from |
23042 | 30849 | L-arabinose | - | builds gas from |
23042 | 17266 | L-sorbose | - | builds gas from |
23042 | 17716 | lactose | - | builds gas from |
23042 | 17306 | maltose | - | builds gas from |
23042 | 29864 | mannitol | - | builds gas from |
23042 | 37657 | methyl D-glucoside | - | builds gas from |
23042 | 506227 | N-acetylglucosamine | - | builds gas from |
23042 | 26546 | rhamnose | - | builds gas from |
23042 | 33942 | ribose | - | builds gas from |
23042 | 17814 | salicin | - | builds gas from |
23042 | 30911 | sorbitol | - | builds gas from |
23042 | 28017 | starch | - | builds gas from |
23042 | 17992 | sucrose | - | builds gas from |
23042 | 27082 | trehalose | - | builds gas from |
23042 | 32528 | turanose | - | builds gas from |
23042 | 16947 | citrate | - | carbon source |
23042 | 27897 | tryptophan | - | energy source |
23042 | casein | - | hydrolysis | |
23042 | O-nitrophenyl-beta-D-galactopyranosid | - | hydrolysis | |
23042 | 17632 | nitrate | - | reduction |
23042 | 27613 | amygdalin | + | builds acid from |
23042 | 18305 | arbutin | + | builds acid from |
23042 | 17057 | cellobiose | + | builds acid from |
23042 | 15824 | D-fructose | + | builds acid from |
23042 | 17634 | D-glucose | + | builds acid from |
23042 | 16024 | D-mannose | + | builds acid from |
23042 | 65327 | D-xylose | + | builds acid from |
23042 | 28066 | gentiobiose | + | builds acid from |
23042 | 17754 | glycerol | + | builds acid from |
23042 | 30849 | L-arabinose | + | builds acid from |
23042 | 17266 | L-sorbose | + | builds acid from |
23042 | 17716 | lactose | + | builds acid from |
23042 | 17306 | maltose | + | builds acid from |
23042 | 29864 | mannitol | + | builds acid from |
23042 | 37657 | methyl D-glucoside | + | builds acid from |
23042 | 506227 | N-acetylglucosamine | + | builds acid from |
23042 | 26546 | rhamnose | + | builds acid from |
23042 | 33942 | ribose | + | builds acid from |
23042 | 17814 | salicin | + | builds acid from |
23042 | 30911 | sorbitol | + | builds acid from |
23042 | 28017 | starch | + | builds acid from |
23042 | 17992 | sucrose | + | builds acid from |
23042 | 27082 | trehalose | + | builds acid from |
23042 | 32528 | turanose | + | builds acid from |
23042 | 4853 | esculin | + | hydrolysis |
23042 | 5291 | gelatin | + | hydrolysis |
23042 | 28017 | starch | + | hydrolysis |
68371 | Potassium 5-ketogluconate | + | builds acid from | |
68371 | Potassium 2-ketogluconate | - | builds acid from | |
68371 | 24265 | gluconate | - | builds acid from |
68371 | 18403 | L-arabitol | - | builds acid from |
68371 | 18333 | D-arabitol | - | builds acid from |
68371 | 18287 | L-fucose | - | builds acid from |
68371 | 28847 | D-fucose | - | builds acid from |
68371 | 16443 | D-tagatose | + | builds acid from |
68371 | 62318 | D-lyxose | + | builds acid from |
68371 | 32528 | turanose | - | builds acid from |
68371 | 28066 | gentiobiose | - | builds acid from |
68371 | 17151 | xylitol | - | builds acid from |
68371 | 28087 | glycogen | - | builds acid from |
68371 | 28017 | starch | - | builds acid from |
68371 | 16634 | raffinose | - | builds acid from |
68371 | 6731 | melezitose | - | builds acid from |
68371 | 15443 | inulin | - | builds acid from |
68371 | 27082 | trehalose | - | builds acid from |
68371 | 17992 | sucrose | - | builds acid from |
68371 | 28053 | melibiose | - | builds acid from |
68371 | 17716 | lactose | - | builds acid from |
68371 | 17306 | maltose | - | builds acid from |
68371 | 17057 | cellobiose | - | builds acid from |
68371 | 17814 | salicin | - | builds acid from |
68371 | 4853 | esculin | + | builds acid from |
68371 | 18305 | arbutin | - | builds acid from |
68371 | 27613 | amygdalin | - | builds acid from |
68371 | 59640 | N-acetylglucosamine | - | builds acid from |
68371 | 320061 | methyl alpha-D-glucopyranoside | - | builds acid from |
68371 | 43943 | methyl alpha-D-mannoside | - | builds acid from |
68371 | 17924 | D-sorbitol | - | builds acid from |
68371 | 16899 | D-mannitol | - | builds acid from |
68371 | 17268 | myo-inositol | - | builds acid from |
68371 | 16813 | galactitol | - | builds acid from |
68371 | 62345 | L-rhamnose | - | builds acid from |
68371 | 17266 | L-sorbose | + | builds acid from |
68371 | 16024 | D-mannose | - | builds acid from |
68371 | 15824 | D-fructose | - | builds acid from |
68371 | 17634 | D-glucose | - | builds acid from |
68371 | 12936 | D-galactose | - | builds acid from |
68371 | 74863 | methyl beta-D-xylopyranoside | - | builds acid from |
68371 | 15963 | ribitol | - | builds acid from |
68371 | 65328 | L-xylose | + | builds acid from |
68371 | 65327 | D-xylose | + | builds acid from |
68371 | 16988 | D-ribose | + | builds acid from |
68371 | 30849 | L-arabinose | + | builds acid from |
68371 | 17108 | D-arabinose | + | builds acid from |
68371 | 17113 | erythritol | - | builds acid from |
68371 | 17754 | glycerol | - | builds acid from |
123506 | 4853 | esculin | + | hydrolysis |
123506 | 606565 | hippurate | - | hydrolysis |
123506 | 17632 | nitrate | + | reduction |
123506 | 16301 | nitrite | + | reduction |
123506 | 17632 | nitrate | + | respiration |
metabolite production
@ref | Chebi-ID | metabolite | production |
---|---|---|---|
23042 | 35581 | indole | no |
23042 | 16136 | hydrogen sulfide | no |
23042 | 15688 | acetoin | no |
123506 | 35581 | indole | no |
metabolite tests
@ref | Chebi-ID | metabolite | voges-proskauer-test | indole test | citrate test | methylred-test |
---|---|---|---|---|---|---|
23042 | 15688 | acetoin | - | |||
23042 | 35581 | indole | - | |||
23042 | 16947 | citrate | - | |||
123506 | 15688 | acetoin | - | |||
123506 | 17234 | glucose | + |
enzymes
@ref | value | activity | ec |
---|---|---|---|
23042 | arginine dihydrolase | - | 3.5.3.6 |
23042 | catalase | + | 1.11.1.6 |
23042 | cytochrome oxidase | + | 1.9.3.1 |
23042 | lysine decarboxylase | - | 4.1.1.18 |
23042 | tryptophan deaminase | - | 4.1.99.1 |
23042 | urease | - | 3.5.1.5 |
68382 | alpha-fucosidase | - | 3.2.1.51 |
68382 | alpha-mannosidase | - | 3.2.1.24 |
68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 |
68382 | beta-glucosidase | - | 3.2.1.21 |
68382 | alpha-glucosidase | + | 3.2.1.20 |
68382 | beta-glucuronidase | - | 3.2.1.31 |
68382 | beta-galactosidase | - | 3.2.1.23 |
68382 | alpha-galactosidase | - | 3.2.1.22 |
68382 | naphthol-AS-BI-phosphohydrolase | - | |
68382 | acid phosphatase | + | 3.1.3.2 |
68382 | alpha-chymotrypsin | - | 3.4.21.1 |
68382 | trypsin | - | 3.4.21.4 |
68382 | cystine arylamidase | - | 3.4.11.3 |
68382 | valine arylamidase | - | |
68382 | leucine arylamidase | - | 3.4.11.1 |
68382 | lipase (C 14) | - | |
68382 | esterase lipase (C 8) | + | |
68382 | esterase (C 4) | + | |
68382 | alkaline phosphatase | + | 3.1.3.1 |
123506 | oxidase | - | |
123506 | beta-galactosidase | - | 3.2.1.23 |
123506 | alcohol dehydrogenase | - | 1.1.1.1 |
123506 | gelatinase | - | |
123506 | amylase | - | |
123506 | DNase | - | |
123506 | caseinase | + | 3.4.21.50 |
123506 | catalase | + | 1.11.1.6 |
123506 | tween esterase | - | |
123506 | gamma-glutamyltransferase | - | 2.3.2.2 |
123506 | lysine decarboxylase | - | 4.1.1.18 |
123506 | ornithine decarboxylase | - | 4.1.1.17 |
123506 | urease | - | 3.5.1.5 |
API zym
@ref | Control | Alkaline phosphatase | Esterase | Esterase Lipase | Lipase | Leucine arylamidase | Valine arylamidase | Cystine arylamidase | Trypsin | alpha- Chymotrypsin | Acid phosphatase | Naphthol-AS-BI-phosphohydrolase | alpha- Galactosidase | beta- Galactosidase | beta- Glucuronidase | alpha- Glucosidase | beta- Glucosidase | N-acetyl-beta- glucosaminidase | alpha- Mannosidase | alpha- Fucosidase |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
123506 | - | + | + | + | - | - | - | - | - | - | + | - | - | - | - | + | - | - | - | - |
API 50CHac
@ref | GLY | ERY | DARA | LARA | RIB | DXYL | LXYL | ADO | MDX | GAL | GLU | FRU | MNE | SBE | RHA | DUL | INO | MAN | SOR | MDM | MDG | NAG | AMY | ARB | ESC | SAL | CEL | MAL | LAC | MEL | SAC | TRE | INU | MLZ | RAF | AMD | GLYG | XLT | GEN | TUR | LYX | TAG | DFUC | LFUC | DARL | LARL | GNT | 2KG | 5KG |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
123506 | - | - | + | + | + | + | + | - | - | - | - | - | - | + | - | - | - | - | - | - | - | - | - | - | + | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | + | + | - | - | - | - | - | - | + |
Isolation, sampling and environmental information
isolation
@ref | sample type | geographic location | country | origin.country | continent |
---|---|---|---|---|---|
1116 | soil | Kyoto, Shimogamo | Japan | JPN | Asia |
49444 | Soil | ||||
123506 | Environment, Soil |
isolation source categories
- Cat1: #Environmental
- Cat2: #Terrestrial
- Cat3: #Soil
taxonmaps
- @ref: 69479
- File name: preview.99_750.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_79;96_455;97_521;98_599;99_750&stattab=map
- Last taxonomy: Bacillaceae
- 16S sequence: FN428685
- Sequence Identity:
- Total samples: 14649
- soil counts: 4724
- aquatic counts: 2043
- animal counts: 5920
- plant counts: 1962
Safety information
risk assessment
@ref | biosafety level | biosafety level comment |
---|---|---|
1116 | 1 | Risk group (German classification) |
123506 | 1 | Risk group (French classification) |
Sequence information
16S sequences
@ref | description | accession | length | database | NCBI tax ID |
---|---|---|---|---|---|
20218 | Bacillus thermoglucosidasius gene for 16S ribosomal RNA | AB021197 | 1523 | ena | 1426 |
20218 | Geobacillus thermoglucosidasius strain DSM 2542 16S-23S ribosomal RNA intergenic spacer and tRNA-Ile gene, partial sequence; and tRNA-Ala gene, complete sequence | EU157954 | 259 | ena | 1426 |
20218 | Geobacillus thermoglucosidasius isolate Gtg15 16S ribosomal RNA gene, partial sequence; 16S-23S internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | EU723644 | 503 | ena | 1426 |
20218 | Geobacillus thermoglucosidasius isolate Gtg21 16S ribosomal RNA gene, partial sequence; 16S-23S internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | EU723645 | 573 | ena | 1426 |
20218 | Geobacillus thermoglucosidasius isolate Gtg33 16S ribosomal RNA gene, partial sequence; 16S-23S internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | EU723646 | 479 | ena | 1426 |
20218 | Bacillus thermoglucosidasius 16S ribosomal RNA | X60641 | 1435 | ena | 1426 |
1116 | Geobacillus thermoglucosidasius partial 16S rRNA gene, strain R-35637 | FN428685 | 1511 | ena | 1426 |
Genome sequences
@ref | description | accession | assembly level | database | NCBI tax ID |
---|---|---|---|---|---|
66792 | Parageobacillus thermoglucosidasius DSM 2542 | GCA_001295365 | complete | ncbi | 1426 |
66792 | Parageobacillus thermoglucosidasius DSM 2542 | GCA_000966225 | contig | ncbi | 1426 |
66792 | Parageobacillus thermoglucosidasius strain DSM 2542 | 1426.99 | wgs | patric | 1426 |
66792 | Parageobacillus thermoglucosidasius strain DSM 2542 | 1426.100 | complete | patric | 1426 |
66792 | Parageobacillus thermoglucosidasius DSM 2542 | 2627853848 | draft | img | 1426 |
66792 | Parageobacillus thermoglucosidasius DSM 2542 | 2687453436 | complete | img | 1426 |
GC content
@ref | GC-content | method |
---|---|---|
1116 | 43.4 | high performance liquid chromatography (HPLC) |
1116 | 45.0 |
Genome-based predictions
predictions
trait | prediction | confidence | training_data |
---|---|---|---|
motile | yes | 87.691 | yes |
flagellated | yes | 82.718 | no |
gram-positive | yes | 83.954 | no |
anaerobic | no | 97.146 | yes |
aerobic | yes | 74.452 | no |
halophile | no | 93.1 | no |
spore-forming | yes | 96.621 | yes |
glucose-util | yes | 91.377 | no |
thermophile | yes | 99.399 | no |
glucose-ferment | no | 91.204 | no |
External links
@ref: 1116
culture collection no.: DSM 2542, ATCC 43742, NCIB 11955, CCUG 28887, NRRL B-14233, CIP 106930, NRRL B-14516, NCIMB 11955
straininfo link
- @ref: 71080
- straininfo: 12264
literature
topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
---|---|---|---|---|---|---|---|---|
Enzymology | 1761534 | Proline residues responsible for thermostability occur with high frequency in the loop regions of an extremely thermostable oligo-1,6-glucosidase from Bacillus thermoglucosidasius KP1006. | Watanabe K, Chishiro K, Kitamura K, Suzuki Y | J Biol Chem | S0021-9258(18)54226-5 | 1991 | Amino Acid Sequence, Bacillus/*enzymology, Base Sequence, Circular Dichroism, Cloning, Molecular, DNA, Bacterial/genetics, Hot Temperature, Molecular Sequence Data, Oligo-1,6-Glucosidase/*chemistry/genetics, Plasmids, Proline/*chemistry, Protein Conformation, Sequence Homology, Nucleic Acid, Spectrophotometry, Ultraviolet | Stress |
Enzymology | 2120057 | Primary structure of the oligo-1,6-glucosidase of Bacillus cereus ATCC7064 deduced from the nucleotide sequence of the cloned gene. | Watanabe K, Kitamura K, Iha H, Suzuki Y | Eur J Biochem | 10.1111/j.1432-1033.1990.tb19267.x | 1990 | Amino Acid Sequence, Bacillus cereus/*enzymology/genetics, Base Sequence, Binding Sites, Cloning, Molecular, DNA Probes, *Genes, Bacterial, Genetic Vectors, Molecular Sequence Data, Oligo-1,6-Glucosidase/*chemistry/genetics/isolation & purification, Sequence Homology, Nucleic Acid, Species Specificity | Phylogeny |
Enzymology | 3089779 | Purification and characterization of Bacillus coagulans oligo-1,6-glucosidase. | Suzuki Y, Tomura Y | Eur J Biochem | 10.1111/j.1432-1033.1986.tb09723.x | 1986 | Amines/pharmacology, Amino Acids/analysis, Bacillus/*enzymology, Carbohydrates/pharmacology, Edetic Acid/pharmacology, Glycoside Hydrolases/*analysis, Hydrogen-Ion Concentration, Hydrolysis, Kinetics, Metals/pharmacology, Oligo-1,6-Glucosidase/*analysis/antagonists & inhibitors/isolation & purification, Substrate Specificity, Sulfhydryl Reagents/pharmacology, Temperature | Phylogeny |
Phylogeny | 16532362 | Isolation and characterization of two novel ethanol-tolerant facultative-anaerobic thermophilic bacteria strains from waste compost. | Fong JC, Svenson CJ, Nakasugi K, Leong CT, Bowman JP, Chen B, Glenn DR, Neilan BA, Rogers PL | Extremophiles | 10.1007/s00792-006-0507-2 | 2006 | Bacillaceae/classification/genetics/*isolation & purification/*metabolism, Bacteria, Anaerobic/classification/genetics/*isolation & purification/*metabolism, Base Composition, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/genetics, Ethanol/*metabolism, Hot Temperature, Microscopy, Electron, Phylogeny, *Soil Microbiology | Metabolism |
Phylogeny | 23194806 | Bacillus thermoglucosidasius sp. nov., a New Species of Obligately Thermophilic Bacilli. | Suzuki Y, Kishigami T, Inoue K, Mizoguchi Y, Eto N, Takagi M, Abe S | Syst Appl Microbiol | 10.1016/S0723-2020(83)80006-X | 1983 | ||
Genetics | 26467717 | Genome sequence of Geobacillus thermoglucosidasius DSM2542, a platform hosts for biotechnological applications with industrial potential. | Chen J, Zhang Z, Zhang C, Yu B | J Biotechnol | 10.1016/j.jbiotec.2015.10.002 | 2015 | Base Sequence, *Biotechnology, *Genome, Bacterial, Geobacillus/*genetics, *Industrial Microbiology | Biotechnology |
Genetics | 27688322 | Complete Genome Sequence of Geobacillus thermoglucosidasius NCIMB 11955, the Progenitor of a Bioethanol Production Strain. | Sheng L, Zhang Y, Minton NP | Genome Announc | 10.1128/genomeA.01065-16 | 2016 | Biotechnology | |
Metabolism | 29986719 | CO-dependent hydrogen production by the facultative anaerobe Parageobacillus thermoglucosidasius. | Mohr T, Aliyu H, Kuchlin R, Polliack S, Zwick M, Neumann A, Cowan D, de Maayer P | Microb Cell Fact | 10.1186/s12934-018-0954-3 | 2018 | Aldehyde Oxidoreductases/genetics/metabolism, Anaerobiosis, Bacillus/genetics/*metabolism, Bacterial Proteins/genetics, Base Composition, Carbon Monoxide/*metabolism, Hydrogen/*metabolism, Hydrogenase/genetics/metabolism, Iron-Sulfur Proteins/genetics/metabolism, Multienzyme Complexes/genetics/metabolism | Enzymology |
Metabolism | 30522433 | Comparative genomic analysis of Parageobacillus thermoglucosidasius strains with distinct hydrogenogenic capacities. | Mohr T, Aliyu H, Kuchlin R, Zwick M, Cowan D, Neumann A, de Maayer P | BMC Genomics | 10.1186/s12864-018-5302-9 | 2018 | Bacterial Proteins/genetics, Base Sequence, Carbon Monoxide/chemistry/metabolism, *Comparative Genomic Hybridization, Genetic Loci, *Genome, Bacterial, Geobacillus/*genetics, Hydrogen/*metabolism, Hydrogenase/genetics, INDEL Mutation, Multienzyme Complexes/genetics, Sequence Alignment | Genetics |
Metabolism | 31188885 | A design of experiments approach for the rapid formulation of a chemically defined medium for metabolic profiling of industrially important microbes. | Singleton C, Gilman J, Rollit J, Zhang K, Parker DA, Love J | PLoS One | 10.1371/journal.pone.0218208 | 2019 | Culture Media/*metabolism, Geobacillus/*growth & development/*metabolism, Metabolome/*physiology, Metabolomics/methods | Cultivation |
Enzymology | 31201678 | Biochemical characterization of a novel thermostable feruloyl esterase from Geobacillus thermoglucosidasius DSM 2542(T). | Ay Sal F, Colak DN, Guler HI, Canakci S, Belduz AO | Mol Biol Rep | 10.1007/s11033-019-04893-6 | 2019 | Amino Acid Sequence, Bacillaceae/*enzymology/*genetics, Carboxylic Ester Hydrolases/*chemistry, Cloning, Molecular, Enzyme Stability, Geobacillus/genetics, Hydrogen-Ion Concentration, Kinetics, Molecular Weight, Substrate Specificity | |
Metabolism | 32221689 | Metabolic engineering of Parageobacillus thermoglucosidasius for the efficient production of (2R, 3R)-butanediol. | Zhou J, Lian J, Rao CV | Appl Microbiol Biotechnol | 10.1007/s00253-020-10553-8 | 2020 | Bacillaceae/*metabolism, Bacillus subtilis/enzymology, Biosynthetic Pathways, Butylene Glycols/*metabolism, Carboxy-Lyases/*metabolism, Fermentation, *Metabolic Engineering, Microorganisms, Genetically-Modified/metabolism, Streptococcus thermophilus/enzymology | Biotechnology |
Metabolism | 35032723 | Relaxed control of sugar utilization in Parageobacillus thermoglucosidasius DSM 2542. | Liang J, Roberts A, van Kranenburg R, Bolhuis A, Leak DJ | Microbiol Res | 10.1016/j.micres.2021.126957 | 2021 | Bacillaceae, Bacterial Proteins/genetics/metabolism, *Gene Expression Regulation, Bacterial, *Repressor Proteins/genetics/metabolism, Xylose | |
35677969 | Dynamic Control Strategy to Produce Riboflavin with Lignocellulose Hydrolysate in the Thermophile Geobacillus thermoglucosidasius. | Wang J, Li Z, Wang W, Pang S, Yao Y, Yuan F, Wang H, Xu Z, Pan G, Liu Z, Chen Y, Fan K | ACS Synth Biol | 10.1021/acssynbio.2c00087 | 2022 | |||
36338101 | Removing carbon catabolite repression in Parageobacillus thermoglucosidasius DSM 2542. | Liang J, van Kranenburg R, Bolhuis A, Leak DJ | Front Microbiol | 10.3389/fmicb.2022.985465 | 2022 |
Reference
@id | authors | catalogue | doi/url | title | journal | pubmed |
---|---|---|---|---|---|---|
1116 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 2542) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-2542 | |||
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
23042 | An Coorevits,Anna E. Dinsdale,Gillian Halket,Liesbeth Lebbe,Paul De Vos,Anita Van Landschoot,Niall A. Logan | 10.1099/ijs.0.030346-0 | Taxonomic revision of the genus Geobacillus : emendation of Geobacillus , G. stearothermophilus , G. jurassicus , G. toebii , G. thermodenitrificans and G. thermoglucosidans (nom. corrig., formerly 'thermoglucosidasius'); transfer of Bacillus thermantarcticus to the genus as G. thermantarcticus comb. nov.; proposal of Caldibacillus debilis gen. nov., comb. nov.; transfer of G. tepidamans to Anoxybacillus as A. tepidamans comb. nov.; and proposal of Anoxybacillus caldiproteolyticus sp. nov. | IJSEM 62: 1470-1485 2012 | 21856988 | |
40602 | Curators of the CIP | https://brclims.pasteur.fr/brcWeb/souche/detail/1/19115 | ||||
49444 | Curators of the CCUG | Culture Collection University of Gothenburg (CCUG) (CCUG 28887) | https://www.ccug.se/strain?id=28887 | |||
66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |||
68371 | Automatically annotated from API 50CH acid | |||||
68382 | Automatically annotated from API zym | |||||
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |||
71080 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID12264.1 | StrainInfo: A central database for resolving microbial strain identifiers | |||
123506 | Curators of the CIP | Collection of Institut Pasteur (CIP 106930) | https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20106930 |