Streptobacillus moniliformis CCUG 14554 is a bacterium that was isolated from Human,knee aspirate,rat-bite fever.
genome sequence 16S sequence Bacteria| @ref 20215 |
|
|
| Domain Bacteria |
| Phylum Fusobacteriota |
| Class Fusobacteriia |
| Order Fusobacteriales |
| Family Leptotrichiaceae |
| Genus Streptobacillus |
| Species Streptobacillus moniliformis |
| Full scientific name Streptobacillus moniliformis Levaditi et al. 1925 (Approved Lists 1980) |
| @ref | Oxygen tolerance | Confidence | |
|---|---|---|---|
| 125439 | facultative anaerobe | 95.926 |
| Cat1 | Cat2 | Cat3 | |
|---|---|---|---|
| #Host | #Human | - | |
| #Host Body-Site | #Limb | #Leg | |
| #Infection | #Disease | - | |
| #Infection | #Patient | - |
| @ref | Sample type | Host species | Sampling date | Geographic location | Country | Country ISO 3 Code | Continent | |
|---|---|---|---|---|---|---|---|---|
| 46132 | Human,knee aspirate,rat-bite fever | Homo sapiens | 1977 | Southend | United Kingdom | GBR | Europe |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | ASM165582v1 assembly for Streptobacillus moniliformis NCTC 11194 | scaffold | 34105 | 32.35 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 124043 | Streptobacillus moniliformis strain NCTC 11194 16S ribosomal RNA gene, partial sequence. | KP657491 | 1476 | 34105 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | oxygen_tolerance | BacteriaNetⓘ | facultative anaerobe | 95.93 | no |
| 125439 | gram_stain | BacteriaNetⓘ | positive | 68.44 | no |
| 125439 | spore_formation | BacteriaNetⓘ | no | 77.23 | no |
| 125439 | motility | BacteriaNetⓘ | yes | 55.66 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 52.73 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 56.68 | no |
| 125438 | aerobic | aerobicⓘ | no | 98.74 | no |
| 125438 | spore-forming | spore-formingⓘ | no | 89.42 | no |
| 125438 | thermophilic | thermophileⓘ | no | 92.54 | no |
| 125438 | flagellated | motile2+ⓘ | no | 89.25 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Phylogeny | Phylogenetic and comparative genomics of the family Leptotrichiaceae and introduction of a novel fingerprinting MLVA for Streptobacillus moniliformis. | Eisenberg T, Fawzy A, Nicklas W, Semmler T, Ewers C. | BMC Genomics | 10.1186/s12864-016-3206-0 | 2016 | |
| Phylogeny | Approved and novel strategies in diagnostics of rat bite fever and other Streptobacillus infections in humans and animals. | Eisenberg T, Ewers C, Rau J, Akimkin V, Nicklas W. | Virulence | 10.1080/21505594.2016.1177694 | 2016 | |
| Phenotypic and Genotypic Characteristics of Members of the Genus Streptobacillus. | Eisenberg T, Nicklas W, Mauder N, Rau J, Contzen M, Semmler T, Hofmann N, Aledelbi K, Ewers C. | PLoS One | 10.1371/journal.pone.0134312 | 2015 | ||
| Pathogenicity | Comparison of media with and without 'Panmede' for the isolation of Streptobacillus moniliformis from blood cultures and observations on the inhibitory effect of sodium polyanethol sulphonate. | Shanson DC, Pratt J, Greene P | J Med Microbiol | 10.1099/00222615-19-2-181 | 1985 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #46132 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 14554 |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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https://doi.org/10.13145/bacdive142771.20260601.11
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