Streptococcus sp. (CCUG 4212, NCTC 10712)

Name: Streptococcus sp. (CCUG 4212, NCTC 10712)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 141637

Type strain

Culture col. no. CCUG 4212 NCTC 10712

NCBI tax ID(s) 1306

Special Collections CCUG

Links

CCUG 4212 is a prokaryote that was isolated from Human sputum.

genome sequence

Name and taxonomic classification

SI-ID 13949

LMG 14552,CCUG 4212,NCFB 2063,NCTC 10712

@ref 20215

Last LPSN update 2025-12-16 10:03:54

Domain Bacillati

Phylum Bacillota

Class Bacilli

Order Lactobacillales

Family Streptococcaceae

Genus Streptococcus

Full scientific name Streptococcus Rosenbach 1884 (Approved Lists 1980)

Morphology

Cell morphology

@ref	Gram stain	Confidence
125439	positive	92.6
125438		90.5

Culture and growth conditions

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	microaerophile	98.5

Spore formation

@ref	Spore formation	Confidence
125439		91

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68381	40585 ChEBI	alpha-cyclodextrin	-	builds acid from	from API rID32STR
68381	29016 ChEBI	arginine	-	hydrolysis	from API rID32STR
68381	18333 ChEBI	D-arabitol	-	builds acid from	from API rID32STR
68381	16899 ChEBI	D-mannitol	-	builds acid from	from API rID32STR
68381	16988 ChEBI	D-ribose	-	builds acid from	from API rID32STR
68381	16443 ChEBI	D-tagatose	-	builds acid from	from API rID32STR
68381	28087 ChEBI	glycogen	-	builds acid from	from API rID32STR
68381	606565 ChEBI	hippurate	-	hydrolysis	from API rID32STR
68381	30849 ChEBI	L-arabinose	-	builds acid from	from API rID32STR
68381	17716 ChEBI	lactose	+	builds acid from	from API rID32STR
68381	17306 ChEBI	maltose	+	builds acid from	from API rID32STR
68381	6731 ChEBI	melezitose	-	builds acid from	from API rID32STR
68381	320055 ChEBI	methyl beta-D-glucopyranoside	-	builds acid from	from API rID32STR
68381	27941 ChEBI	pullulan	+	builds acid from	from API rID32STR
68381	16634 ChEBI	raffinose	+	builds acid from	from API rID32STR
68381	30911 ChEBI	sorbitol	-	builds acid from	from API rID32STR
68381	17992 ChEBI	sucrose	+	builds acid from	from API rID32STR
68381	27082 ChEBI	trehalose	-	builds acid from	from API rID32STR
68381	16199 ChEBI	urea	-	hydrolysis	from API rID32STR

Enzymes

@ref	Value	Activity
68381	Alanyl-Phenylalanyl-Proline arylamidase	+	from API rID32STR
68381	alkaline phosphatase	-	from API rID32STR
68381	alpha-galactosidase	+	from API rID32STR
68381	arginine dihydrolase	-	from API rID32STR
68381	beta-galactosidase	-	from API rID32STR
68381	beta-glucosidase	-	from API rID32STR
68381	beta-glucuronidase	-	from API rID32STR
68381	beta-mannosidase	-	from API rID32STR
68381	N-acetyl-beta-glucosaminidase	-	from API rID32STR
68381	pyrrolidonyl arylamidase	-	from API rID32STR
68381	urease	-	from API rID32STR

API rID32STR

@ref	ADH (Arg)	beta GLU	beta GAR	beta GUR	alpha GAL	PAL	RIB	MAN	SOR	LAC	TRE	RAF	SAC	LARA	DARL	Acid from alpha-cyclodextrinCDEX	Acetoin production (Voges Proskauer test)VP	Alanyl-Phenylalanyl-Proline arylamidaseAPPA	beta GAL	Pyrrolidonyl arylamidasePyrA	N-Acetyl-glucosaminidasebeta NAG	Glycyl-tryptophan arylamidaseGTA	HIP	GLYG	PUL	MAL	MEL	MLZ	Acidification of methyl beta-D-glucopyranosideMbeta DG	TAG	beta MAN	URE
44717	-	-	-	-	+	-	-	-	-	+	-	+	+	-	-	-	+	+	-	-	-	-	-	-	+	+	+	-	-	-	-	-
44717	-	-	-	-	+	-	-	-	-	+	-	+	+	-	-	-	-	+	-	-	-	+	-	-	+	+	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2
#Host	#Human
#Host Body Product	#Fluids

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent
44717	Human sputum	United Kingdom	GBR	Europe

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM95996v1 assembly for Streptococcus gordonii UB10712	contig	GCA_000959965	28037.210	2663762871	28037	77.71

Genome browser: GCA_000959965

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Streptococcus mitis strain NCTC 10712
PATRIC: 28037.210

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	91.00	no
125439	motility	BacteriaNetⓘ	no	86.20	no
125439	gram_stain	BacteriaNetⓘ	positive	92.60	no
125439	oxygen_tolerance	BacteriaNetⓘ	microaerophile	98.50	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Streptococcus mitis strain NCTC 10712
PATRIC: 28037.210

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	87.20	no
125438	anaerobic	anaerobicⓘ	no	92.14	no
125438	spore-forming	spore-formingⓘ	no	84.11	no
125438	thermophilic	thermophileⓘ	no	94.78	no
125438	aerobic	aerobicⓘ	no	96.50	no
125438	flagellated	motile2+ⓘ	no	90.50	no

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#44717	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 4212
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#68381	Automatically annotated from API rID32STR .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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