Name: Roseomonas eburnea BUT-5
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 141094

Type strain:

Species: Roseomonas eburnea

Strain Designation: BUT-5

Culture col. no.: CCTCC AB 2013276, KACC 17166

NCBI tax ID(s): 1346889 (species)

Section

Roseomonas eburnea BUT-5 is a Gram-negative, rod-shaped bacterium that forms circular colonies and was isolated from activated sludge of an herbicides-manufacturing wastewater treatment facility.

colony-forming
Gram-negative
rod-shaped
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Rhodospirillales*
	Family	*Acetobacteraceae*
	Genus	*Roseomonas*
	Species	**Roseomonas eburnea**
	Full Scientific Name (LPSN)	Roseomonas eburnea Wang et al. 2016

Synonym

Neoroseomonas eburnea

Information on morphological and physiological properties Morphology

[Ref.: #44000]	Gram stain	negative

[Ref.: #44000]	Cell length	1.3-2.3 µm

[Ref.: #44000]	Cell width	0.6-0.9 µm

[Ref.: #44000]	Cell shape	rod-shaped

[Ref.: #44000]	Motility	no

[Ref.: #44000]	Colony size	2 mm
[Ref.: #44000]	Colony color	ivory-pigmented, shiny
[Ref.: #44000]	Colony shape	circular
[Ref.: #44000]	Incubation period	5 days
[Ref.: #44000]	Cultivation medium used	R2A agar

Information on culture and growth conditions Culture and growth conditions

[Ref.: #44000]

Culture medium

Reasoners 2A agar

[Ref.: #44000]

Culture medium growth

	Temperatures	Kind of temperature		Temperature
[Ref.: #44000]			growth	15-35 °C
[Ref.: #44000]			optimum	30 °C

[Ref.: #44000]

Temperature range

mesophilic

	pH	Kind of pH		pH
[Ref.: #44000]			optimum	6.0-8.0
[Ref.: #44000]			growth	3.0-10.0

Information on physiology and metabolism Physiology and metabolism

[Ref.: #44000]	Type of spore	endospore
[Ref.: #44000]	Ability of spore formation	no

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #44000]		NaCl		growth	0.5-7.0	%
[Ref.: #44000]		NaCl		optimum	1.0-2.0	%

[Ref.: #44000]

Observation

predominant respiratory quinone is ubiquinone Q-10

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #44000]	2-oxopentanoate ChEBI	+	carbon source
[Ref.: #44000]	4-hydroxyphenylacetic acid ChEBI	+	carbon source
[Ref.: #44000]	adipate ChEBI	+	carbon source
[Ref.: #44000]	amygdalin ChEBI	-	builds acid from
[Ref.: #44000]	beta-hydroxybutyrate ChEBI	+	carbon source
[Ref.: #44000]	casein	+	hydrolysis
[Ref.: #44000]	citrate ChEBI	-	assimilation
[Ref.: #44000]	D-alanine ChEBI	+	carbon source
[Ref.: #44000]	D-glucose ChEBI	-	builds acid from
[Ref.: #44000]	D-mannitol ChEBI	-	builds acid from
[Ref.: #44000]	D-sorbitol ChEBI	-	builds acid from
[Ref.: #44000]	decanoate ChEBI	+	carbon source
[Ref.: #44000]	esculin ferric citrate	-	hydrolysis
[Ref.: #44000]	gelatin ChEBI	-	hydrolysis
[Ref.: #44000]	hypoxanthine ChEBI	-	hydrolysis
[Ref.: #44000]	L-alaninamide ChEBI	+	carbon source
[Ref.: #44000]	L-alanylglycine ChEBI	+	carbon source
[Ref.: #44000]	L-asparagine ChEBI	+	carbon source
[Ref.: #44000]	L-leucine ChEBI	+	carbon source
[Ref.: #44000]	L-rhamnose ChEBI	-	builds acid from
[Ref.: #44000]	lactate ChEBI	+	carbon source
[Ref.: #44000]	lactose ChEBI	-	builds acid from
[Ref.: #44000]	malate ChEBI	+	carbon source
[Ref.: #44000]	maltose ChEBI	-	builds acid from
[Ref.: #44000]	melibiose ChEBI	-	builds acid from
[Ref.: #44000]	methyl pyruvate ChEBI	+	carbon source
[Ref.: #44000]	monomethyl succinate ChEBI	+	carbon source
[Ref.: #44000]	myo-inositol ChEBI	-	builds acid from
[Ref.: #44000]	nitrate ChEBI	-	reduction
[Ref.: #44000]	propionate ChEBI	+	carbon source
[Ref.: #44000]	sodium L-glutamate ChEBI	+	carbon source
[Ref.: #44000]	starch ChEBI	-	hydrolysis
[Ref.: #44000]	sucrose ChEBI	-	builds acid from
[Ref.: #44000]	tween 20 ChEBI	-	hydrolysis
[Ref.: #44000]	tween 80 ChEBI	-	hydrolysis
[Ref.: #44000]	tyrosine ChEBI	-	hydrolysis
[Ref.: #44000]	urea ChEBI	-	hydrolysis
	Only first 10 entries are displayed. Click here to see all.

	Antibiotica	Metabolite	Antibiotic resistance	Concentration
[Ref.: #44000]		enoxacin ChEBI	yes	10	µg (disc)
[Ref.: #44000]		trimethoprim ChEBI	yes	5	µg (disc)

	Metabolite production	Metabolite	Production
[Ref.: #44000]		hydrogen sulfide ChEBI	no
[Ref.: #44000]		indole-3-acetate ChEBI	no

	Enzyme	Enzyme activity	EC number
[Ref.: #44000]	alkaline phosphatase	-	3.1.3.1
[Ref.: #44000]	alpha-galactosidase	+	3.2.1.22
[Ref.: #44000]	alpha-glucosidase	+	3.2.1.20
[Ref.: #44000]	alpha-mannosidase	+	3.2.1.24
[Ref.: #44000]	arginine dihydrolase	-	3.5.3.6
[Ref.: #44000]	beta-galactosidase	-	3.2.1.23
[Ref.: #44000]	catalase	+	1.11.1.6
[Ref.: #44000]	chymotrypsin	+	3.4.4.5
[Ref.: #44000]	cystine arylamidase	+	3.4.11.3
[Ref.: #44000]	cytochrome oxidase	-	1.9.3.1
[Ref.: #44000]	esterase (C 4)	-
[Ref.: #44000]	lysine decarboxylase	-	4.1.1.18
[Ref.: #44000]	naphthol-AS-BI-phosphohydrolase	-
[Ref.: #44000]	valine arylamidase	+
	Only first 10 entries are displayed. Click here to see all.

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #44000]

Fatty acid	Percentage
C16:0	7.9
C18:1 2OH	6.7
C16:1ω5c	3.1
C19:0cycloω8c	2.3
C18:0	2
C16:0 2OH	1.4
C17:1ω7c	1.2
C18:1ω9c	1.2
C18:1ω5c	1
C16:0 3OH	0.9
11-methyl C18:1ω7c	0.2

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #44000]	Sample type/isolated from	activated sludge of an herbicides-manufacturing wastewater treatment facility
[Ref.: #44000]	Geographic location (country and/or sea, region)	Kunshan city, Jiangsu province
[Ref.: #44000]	Country	China
[Ref.: #44000]	Country ISO 3 Code	CHN
[Ref.: #44000]	Continent	Asia
[Ref.: #44000]	Geographic location	31.3666°/120.9330°
* marker position based on {}

Isolation sources categories

#Engineered	#Waste	#Activated sludge
#Engineered	#Waste	#Water treatment plant

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KF254767 (>99% sequence identity) for Roseomonas eburnea from Microbeatlas

Aquatic Samples	127
Soil Samples	72
Animal Samples	34
Plant Samples	10
Total Samples	243

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #44000]	16S rRNA gene sequence	KF254767		GenBank

[Ref.: #44000]

GC-content

67.6 mol%

Availability in culture collections External links

[Ref.: #44000]

Culture collection no.

CCTCC AB 2013276, KACC 17166

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Roseomonas rubea sp. nov., isolated from rice paddy soil.	Lee HJ, Whang KS	Int J Syst Evol Microbiol	10.1099/ijsem.0.005251	2022	*
Phylogeny	Roseomonas eburnea sp. nov., isolated from activated sludge.	Wang C, Deng S, Liu X, Yao L, Shi C, Jiang J, Kwon SW, He J, Li J	Int J Syst Evol Microbiol	10.1099/ijsem.0.000728	2015	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#44000

Chenghong Wang, Shikai Deng, Xin Liu, Li Yao, Chao Shi, Jin Jiang, Soon-Wo Kwon, Jian He, Jiayou Li: Roseomonas eburnea sp. nov., isolated from activated sludge. IJSEM 66: 385 - 390 2016 ( DOI 10.1099/ijsem.0.000728 , PubMed 26530339 )

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

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