Name: Luteolibacter gellanilyticus CB-286403
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 140773

Type strain:

Species: Luteolibacter gellanilyticus

Strain Designation: CB-286403

Culture col. no.: CECT 8659, DSM 28998

Strain history: <- O. Genilloud and J. Pascual, Fundación Medina, Granada, Spain; CB-286403 <- J. Pascual

NCBI tax ID(s): 1639998 (species)

SI-ID 405678

DSM 28998

Special Collections

Section

Luteolibacter gellanilyticus CB-286403 is an aerobe, chemoorganoheterotroph, Gram-negative bacterium that forms circular colonies and was isolated from Mediterranean forest soil, 972 m, above sea level.

colony-forming
Gram-negative
rod-shaped
aerobe
chemoorganoheterotroph
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Verrucomicrobiota*
	Class	*Verrucomicrobiia*
	Order	*Verrucomicrobiales*
	Family	*Verrucomicrobiaceae*
	Genus	*Luteolibacter*
	Species	**Luteolibacter gellanilyticus**
	Full Scientific Name (LPSN)	Luteolibacter gellanilyticus Pascual et al. 2017

Information on morphological and physiological properties Morphology

[Ref.: #43551]	Gram stain	negative

[Ref.: #43551]	Cell length	0.9-1.5 µm

[Ref.: #43551]	Cell width	0.2-0.5 µm

[Ref.: #43551]	Cell shape	rod-shaped

[Ref.: #43551]	Motility	no

[Ref.: #43551]	Colony color	Lemon yellow
[Ref.: #43551]	Colony shape	circular
[Ref.: #43551]	Incubation period	5 days
[Ref.: #43551]	Cultivation medium used	R2A-noble agar

Information on culture and growth conditions Culture and growth conditions

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Culture medium

R2A-noble agar

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Culture medium growth

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Culture medium

R2A MEDIUM (DSMZ Medium 830)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

expand / minimize

		Temperature
[Ref.: #43551]	growth	4-33 °C
[Ref.: #43551]	optimum	25-28 °C
[Ref.: #67691]	growth	25 °C

	pH	Kind of pH		pH
[Ref.: #43551]			optimum	7-7.5
[Ref.: #43551]			growth	6-9

Information on physiology and metabolism Physiology and metabolism

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Oxygen tolerance

aerobe

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Nutrition type

chemoorganoheterotroph

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Halophily / tolerance level

non-halophilic

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #43551]		NaCl		growth	0-1	%(w/v)
[Ref.: #43551]		NaCl		optimum	0	%(w/v)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #43551]	2,2-dimethylsuccinic acid ChEBI	-	growth
[Ref.: #43551]	2,3-butanediol ChEBI	-	oxidation
[Ref.: #43551]	2-oxoglutarate ChEBI	+/-	oxidation
[Ref.: #43551]	4-aminobenzoate ChEBI	-	growth
[Ref.: #43551]	abietate ChEBI	-	growth
[Ref.: #43551]	alginate ChEBI	-	growth
[Ref.: #43551]	beta-cyclodextrin ChEBI	-	growth
[Ref.: #43551]	carboxymethylcellulose ChEBI	-	growth
[Ref.: #43551]	cellobiose ChEBI	+	oxidation
[Ref.: #43551]	cellobiose ChEBI	+/-	growth
[Ref.: #43551]	cellulose ChEBI	-	growth
[Ref.: #43551]	citrate ChEBI	-	growth
[Ref.: #43551]	D-arabinose ChEBI	-	growth
[Ref.: #43551]	D-fructose ChEBI	-	growth
[Ref.: #43551]	D-galactonic acid lactone ChEBI	-	oxidation
[Ref.: #43551]	D-galactose ChEBI	-	growth
[Ref.: #43551]	D-gluconate ChEBI	-	oxidation
[Ref.: #43551]	D-glucosamine ChEBI	-	growth
[Ref.: #43551]	D-glucose ChEBI	-	growth
[Ref.: #43551]	D-glucose ChEBI	+	growth
[Ref.: #43551]	D-glucose 6-phosphate ChEBI	-	growth
[Ref.: #43551]	D-glucose 6-phosphate ChEBI	-	oxidation
[Ref.: #43551]	D-glucuronate ChEBI	-	growth
[Ref.: #43551]	D-mannitol ChEBI	-	growth
[Ref.: #43551]	D-mannose ChEBI	+	growth
[Ref.: #43551]	D-psicose ChEBI	+	oxidation
[Ref.: #43551]	D-ribose ChEBI	-	growth
[Ref.: #43551]	D-sorbitol ChEBI	-	growth
[Ref.: #43551]	D-sorbitol ChEBI	-	oxidation
[Ref.: #43551]	D-xylose ChEBI	-	growth
[Ref.: #43551]	deoxycholic acid ChEBI	-	growth
[Ref.: #43551]	dextrin ChEBI	+	growth
[Ref.: #43551]	dextrin ChEBI	+	oxidation
[Ref.: #43551]	diethylamine ChEBI	-	growth
[Ref.: #43551]	erythritol ChEBI	-	oxidation
[Ref.: #43551]	esculin ChEBI	+	growth
[Ref.: #43551]	formate ChEBI	-	oxidation
[Ref.: #43551]	galactitol ChEBI	-	growth
[Ref.: #43551]	gelatin ChEBI	-	growth
[Ref.: #43551]	gentiobiose ChEBI	+/-	oxidation
[Ref.: #43551]	glucose ChEBI	-	fermentation
[Ref.: #43551]	glycerol ChEBI	+	growth
[Ref.: #43551]	glycerol ChEBI	+	oxidation
[Ref.: #43551]	glycine ChEBI	-	growth
[Ref.: #43551]	inulin ChEBI	+/-	growth
[Ref.: #43551]	L-alanine ChEBI	-	growth
[Ref.: #43551]	L-arabinose ChEBI	-	growth
[Ref.: #43551]	L-arabinose ChEBI	-	oxidation
[Ref.: #43551]	L-arginine ChEBI	-	growth
[Ref.: #43551]	L-asparagine ChEBI	-	growth
[Ref.: #43551]	L-fucose ChEBI	-	oxidation
[Ref.: #43551]	L-glutamate ChEBI	-	growth
[Ref.: #43551]	L-histidine ChEBI	-	growth
[Ref.: #43551]	L-leucine ChEBI	-	growth
[Ref.: #43551]	L-lysine ChEBI	-	growth
[Ref.: #43551]	L-methionine ChEBI	-	growth
[Ref.: #43551]	L-phenylalanine ChEBI	+	growth
[Ref.: #43551]	L-proline ChEBI	-	growth
[Ref.: #43551]	L-rhamnose ChEBI	-	growth
[Ref.: #43551]	L-serine ChEBI	-	growth
[Ref.: #43551]	L-sorbose ChEBI	-	growth
[Ref.: #43551]	L-tyrosine ChEBI	-	growth
[Ref.: #43551]	lactate ChEBI	-	growth
[Ref.: #43551]	lactose ChEBI	-	oxidation
[Ref.: #43551]	lactose ChEBI	+/-	growth
[Ref.: #43551]	lactulose ChEBI	-	oxidation
[Ref.: #43551]	laminarin ChEBI	-	growth
[Ref.: #43551]	lipoate ChEBI	-	growth
[Ref.: #43551]	maltose ChEBI	-	oxidation
[Ref.: #43551]	maltose ChEBI	+/-	growth
[Ref.: #43551]	melezitose ChEBI	-	growth
[Ref.: #43551]	melibiose ChEBI	-	growth
[Ref.: #43551]	melibiose ChEBI	-	oxidation
[Ref.: #43551]	methyl D-glucoside ChEBI	+	oxidation
[Ref.: #43551]	methyl pyruvate ChEBI	-	oxidation
[Ref.: #43551]	milk	+	growth
[Ref.: #43551]	monomethyl succinate ChEBI	-	oxidation
[Ref.: #43551]	N-acetylglucosamine ChEBI	-	growth
[Ref.: #43551]	N-acetylglucosamine ChEBI	-	oxidation
[Ref.: #43551]	nitrate ChEBI	-	reduction
[Ref.: #43551]	peptone	+/-	growth
[Ref.: #43551]	polyethylene glycol ChEBI	-	growth
[Ref.: #43551]	propionate ChEBI	-	growth
[Ref.: #43551]	pyruvate ChEBI	+	growth
[Ref.: #43551]	raffinose ChEBI	-	oxidation
[Ref.: #43551]	raffinose ChEBI	+/-	growth
[Ref.: #43551]	ribitol ChEBI	-	growth
[Ref.: #43551]	starch ChEBI	+	growth
[Ref.: #43551]	succinate ChEBI	-	growth
[Ref.: #43551]	sucrose ChEBI	-	oxidation
[Ref.: #43551]	sucrose ChEBI	+	growth
[Ref.: #43551]	trehalose ChEBI	-	growth
[Ref.: #43551]	trehalose ChEBI	-	oxidation
[Ref.: #43551]	trehalose ChEBI	+	growth
[Ref.: #43551]	tryptophan ChEBI	-	growth
[Ref.: #43551]	turanose ChEBI	+/-	oxidation
[Ref.: #43551]	xylan ChEBI	-	growth
[Ref.: #43551]	xylitol ChEBI	-	oxidation
[Ref.: #43551]	yeast extract	+/-	growth
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Antibiotic sensitivity	Concentration		Antibiotic resistance	Concentration
[Ref.: #43551]	amikacin ChEBI	yes	30	µg (disc)
[Ref.: #43551]	ampicillin ChEBI				yes	2	µg (disc)
[Ref.: #43551]	ampicillin ChEBI				yes	10	µg (disc)
[Ref.: #43551]	carbenicillin ChEBI	yes	100	µg (disc)
[Ref.: #43551]	cefamandole ChEBI				yes	30	µg (disc)
[Ref.: #43551]	ceftazidime ChEBI				yes	30	µg (disc)
[Ref.: #43551]	norfloxacin ChEBI	yes	10	µg (disc)
[Ref.: #43551]	oxacillin ChEBI				yes	5	µg (disc)
[Ref.: #43551]	penicillin g ChEBI				yes	2	Unit (disc)

	Metabolite production	Metabolite	Production
[Ref.: #43551]		indole ChEBI	no

	Enzyme	Enzyme activity	EC number
[Ref.: #43551]	acid phosphatase	+	3.1.3.2
[Ref.: #43551]	alkaline phosphatase	+	3.1.3.1
[Ref.: #43551]	alpha-chymotrypsin	-	3.4.21.1
[Ref.: #43551]	alpha-fucosidase	-	3.2.1.51
[Ref.: #43551]	alpha-galactosidase	-	3.2.1.22
[Ref.: #43551]	alpha-glucosidase	-	3.2.1.20
[Ref.: #43551]	alpha-mannosidase	-	3.2.1.24
[Ref.: #43551]	arginine dihydrolase	-	3.5.3.6
[Ref.: #43551]	beta-galactosidase	+	3.2.1.23
[Ref.: #43551]	beta-glucosidase	+	3.2.1.21
[Ref.: #43551]	beta-glucuronidase	-	3.2.1.31
[Ref.: #43551]	catalase	+	1.11.1.6
[Ref.: #43551]	cystine arylamidase	-	3.4.11.3
[Ref.: #43551]	cytochrome oxidase	+	1.9.3.1
[Ref.: #43551]	esterase (C 4)	+
[Ref.: #43551]	esterase Lipase (C 8)	-
[Ref.: #43551]	gelatinase	-
[Ref.: #43551]	leucine arylamidase	-	3.4.11.1
[Ref.: #43551]	lipase (C 14)	-
[Ref.: #43551]	N-acetyl-beta-glucosaminidase	-	3.2.1.52
[Ref.: #43551]	naphthol-AS-BI-phosphohydrolase	+
[Ref.: #43551]	trypsin	-	3.4.21.4
[Ref.: #43551]	urease	-	3.5.1.5
[Ref.: #43551]	valine arylamidase	-
	Only first 10 entries are displayed. Click here to see all.

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #43551]

Fatty acid	Percentage
C15:0 iso	26
C17:0 iso 3OH	22.1
C15:1 iso G	15.1
C16:1ω7c / C16:1ω6c	9.8
C16:0-10-methyl / iso-C17:1ω9c	6.8
C15:0 iso 3OH	5.1
C15:1ω6c	2.9
C16:0 iso 3OH	2.7
C16:0 3OH	1.3
C16:0	1.1
C14:0	1.1

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #43551]	Sample type/isolated from	Mediterranean forest soil, 972 m, above sea level
[Ref.: #43551]	Geographic location (country and/or sea, region)	Sierra de Tejeda, Almijara and Alhama Natural Park
[Ref.: #43551]	Country	Spain
[Ref.: #43551]	Country ISO 3 Code	ESP
[Ref.: #43551]	Continent	Europe
[Ref.: #43551]	Geographic location	36.9090°/-3.8640°
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Forest
#Environmental	#Terrestrial	#Soil

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

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Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #43551]	Luteolibacter sp. CB 286403 partial 16S rRNA gene, strain CB 286403	LN833280		GenBank ENA

Availability in culture collections External links

[Ref.: #67691]

Culture collection no.

CECT 8659, DSM 28998

[Ref.: #96788]

SI-ID 405678

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Luteolibacter ambystomatis sp. nov., isolated from the skin of an Anderson's salamander (Ambystoma andersoni).	Busse HJ, Kampfer P, Szostak MP, Spergser J	Int J Syst Evol Microbiol	10.1099/ijsem.0.005043	2021	*
Phylogeny	Luteolibacter gellanilyticus sp. nov., a gellan-gum-degrading bacterium of the phylum Verrucomicrobia isolated from miniaturized diffusion chambers.	Pascual J, Garcia-Lopez M, Gonzalez I, Genilloud O	Int J Syst Evol Microbiol	10.1099/ijsem.0.002227	2017	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#43551

Javier Pascual, Marina García-López, Ignacio Gonzalez, Olga Genilloud: Luteolibacter gellanilyticus sp. nov., a gellan-gum-degrading bacterium of the phylum Verrucomicrobia isolated from miniaturized diffusion chambers. IJSEM 67: 3951 - 3959 2017 ( DOI 10.1099/ijsem.0.002227 , PubMed 28905697 )

#67691

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 28998

#96788

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID405678.1 )

* These data were automatically processed and therefore are not curated

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