Name: Planktotalea arctica KACC 18009
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 140733

Type strain:

Species: Planktotalea arctica

Culture col. no.: KACC 18009, NBRC 110393, IMCC 9565

NCBI tax ID(s): 1481893 (species)

Section

Planktotalea arctica KACC 18009 is an aerobe, Gram-negative, rod-shaped bacterium that forms circular colonies and was isolated from a surface seawater sample, as a single colony, collected off the coast of Kongsfjorden.

colony-forming
Gram-negative
rod-shaped
aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Rhodobacterales*
	Family	*Roseobacteraceae*
	Genus	*Planktotalea*
	Species	**Planktotalea arctica**
	Full Scientific Name (LPSN)	Planktotalea arctica Baek et al. 2017

Information on morphological and physiological properties Morphology

[Ref.: #43512]	Gram stain	negative

[Ref.: #43512]	Cell length	2.2-2.8 µm

[Ref.: #43512]	Cell width	0.8-1.0 µm

[Ref.: #43512]	Cell shape	rod-shaped

[Ref.: #43512]	Motility	no

[Ref.: #43512]	Colony size	1-2 mm
[Ref.: #43512]	Colony shape	circular
[Ref.: #43512]	Incubation period	5 days
[Ref.: #43512]	Cultivation medium used	MA agar

[Ref.: #43512]

Pigment production

Information on culture and growth conditions Culture and growth conditions

[Ref.: #43512]

Culture medium

Marine agar (MA)

[Ref.: #43512]

Culture medium growth

	Temperatures	Kind of temperature		Temperature
[Ref.: #43512]			growth	4-30 °C
[Ref.: #43512]			optimum	20 °C

[Ref.: #43512]

Temperature range

psychrophilic

	pH	Kind of pH		pH
[Ref.: #43512]			optimum	7
[Ref.: #43512]			growth	6-9

Information on physiology and metabolism Physiology and metabolism

[Ref.: #43512]

Oxygen tolerance

aerobe

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #43512]		NaCl		growth	1-5	%
[Ref.: #43512]		NaCl		optimum	2	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #43512]	2-hydroxybutyrate ChEBI	+	respiration
[Ref.: #43512]	3-hydroxybutyrate ChEBI	-	respiration
[Ref.: #43512]	acetate ChEBI	-	respiration
[Ref.: #43512]	casein	-	hydrolysis
[Ref.: #43512]	chitin ChEBI	-	hydrolysis
[Ref.: #43512]	citrate ChEBI	-	respiration
[Ref.: #43512]	D-fructose ChEBI	-	respiration
[Ref.: #43512]	D-galactose ChEBI	-	respiration
[Ref.: #43512]	D-mannitol ChEBI	-	respiration
[Ref.: #43512]	D-mannose ChEBI	-	respiration
[Ref.: #43512]	dna ChEBI	-	hydrolysis
[Ref.: #43512]	esculin ChEBI	+	hydrolysis
[Ref.: #43512]	formate ChEBI	+	respiration
[Ref.: #43512]	gelatin ChEBI	-	hydrolysis
[Ref.: #43512]	glucose ChEBI	-	fermentation
[Ref.: #43512]	glycyl L-aspartic acid ChEBI	+	respiration
[Ref.: #43512]	glycyl-l-glutamate ChEBI	+	respiration
[Ref.: #43512]	hypoxanthine ChEBI	+	hydrolysis
[Ref.: #43512]	inosine ChEBI	+	respiration
[Ref.: #43512]	L-alaninamide ChEBI	+	respiration
[Ref.: #43512]	L-alanine ChEBI	+	respiration
[Ref.: #43512]	L-alanylglycine ChEBI	+	respiration
[Ref.: #43512]	L-aspartate ChEBI	-	respiration
[Ref.: #43512]	L-glutamate ChEBI	+	respiration
[Ref.: #43512]	L-proline ChEBI	+	respiration
[Ref.: #43512]	L-pyroglutamic acid ChEBI	+	respiration
[Ref.: #43512]	L-serine ChEBI	+	respiration
[Ref.: #43512]	lactate ChEBI	+	respiration
[Ref.: #43512]	maltose ChEBI	-	respiration
[Ref.: #43512]	monomethyl succinate ChEBI	-	respiration
[Ref.: #43512]	nitrate ChEBI	-	reduction
[Ref.: #43512]	starch ChEBI	-	hydrolysis
[Ref.: #43512]	succinamate ChEBI	+	respiration
[Ref.: #43512]	succinate ChEBI	+	respiration
[Ref.: #43512]	sucrose ChEBI	-	respiration
[Ref.: #43512]	tween 20 ChEBI	+	hydrolysis
[Ref.: #43512]	tween 40 ChEBI	+	hydrolysis
[Ref.: #43512]	tween 60 ChEBI	-	hydrolysis
[Ref.: #43512]	tween 80 ChEBI	-	hydrolysis
[Ref.: #43512]	tween 80 ChEBI	-	respiration
[Ref.: #43512]	uridine ChEBI	+	respiration
[Ref.: #43512]	xanthine ChEBI	-	hydrolysis
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #43512]		hydrogen sulfide ChEBI	no
[Ref.: #43512]		indole ChEBI	no

	Enzyme	Enzyme activity	EC number
[Ref.: #43512]	acid phosphatase	+	3.1.3.2
[Ref.: #43512]	alkaline phosphatase	+	3.1.3.1
[Ref.: #43512]	alpha-chymotrypsin	-	3.4.21.1
[Ref.: #43512]	alpha-fucosidase	-	3.2.1.51
[Ref.: #43512]	alpha-galactosidase	-	3.2.1.22
[Ref.: #43512]	alpha-glucosidase	-	3.2.1.20
[Ref.: #43512]	alpha-mannosidase	-	3.2.1.24
[Ref.: #43512]	arginine dihydrolase	-	3.5.3.6
[Ref.: #43512]	beta-galactosidase	-	3.2.1.23
[Ref.: #43512]	beta-glucosidase	-	3.2.1.21
[Ref.: #43512]	beta-glucuronidase	-	3.2.1.31
[Ref.: #43512]	cystine arylamidase	+	3.4.11.3
[Ref.: #43512]	esterase (C 4)	+
[Ref.: #43512]	esterase Lipase (C 8)	-
[Ref.: #43512]	leucine arylamidase	+	3.4.11.1
[Ref.: #43512]	lipase	+
[Ref.: #43512]	N-acetyl-beta-glucosaminidase	-	3.2.1.52
[Ref.: #43512]	naphthol-AS-BI-phosphohydrolase	+
[Ref.: #43512]	trypsin	-	3.4.21.4
[Ref.: #43512]	urease	-	3.5.1.5
[Ref.: #43512]	valine arylamidase	+
	Only first 10 entries are displayed. Click here to see all.

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #43512]

Fatty acid	Percentage
C16:0	29.1
C18:1ω7c	27.9
C16:1ω7c / C16:1ω6c	11.9
C12:0 3OH	11.1
C19:0cycloω8c	7
C12:0	4.2
C17:0cyclo	3
C10:0	1.9
C12:0 2OH	1.4
C14:0	1.1

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #43512]	Sample type/isolated from	a surface seawater sample, as a single colony, collected off the coast of Kongsfjorden
[Ref.: #43512]	Geographic location (country and/or sea, region)	Kongsfjorden, Svalbard
[Ref.: #43512]	Country	Arctic Ocean
[Ref.: #43512]	Geographic location	77.0020°/11.3090°
* marker position based on {}

Isolation sources categories

#Environmental

#Aquatic

#Marine

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KJ160495 (>99% sequence identity) for Planktotalea arctica from Microbeatlas

Aquatic Samples	251
Soil Samples	4
Animal Samples	18
Plant Samples	1
Total Samples	274

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #43512]	16S rRNA gene sequence	KJ160495		GenBank

[Ref.: #43512]

GC-content

57.1 mol%

genome sequence analysis

Availability in culture collections External links

[Ref.: #43512]

Culture collection no.

KACC 18009, NBRC 110393, IMCC 9565

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Planktotalea arctica sp. nov., isolated from Arctic seawater.	Baek K, Choi A, Lee YM, Lee HK, Cho JC	Int J Syst Evol Microbiol	10.1099/ijsem.0.002152	2017	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#43512

Kiwoon Baek, Ahyoung Choi, Yung Mi Lee, Hong Kum Lee, Jang-Cheon Cho: Planktotalea arctica sp. nov., isolated from Arctic seawater. IJSEM 67: 3501 - 3505 2017 ( DOI 10.1099/ijsem.0.002152 , PubMed 28840817 )

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Planktotalea arctica in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF