Name: Reyranella aquatilis Seoho-37
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 140732

Type strain:

Species: Reyranella aquatilis

Strain Designation: Seoho-37

Culture col. no.: KCTC 52223, JCM 31892

Strain history: <- Seong-Jun Chun(Dr. Hyung-gwan Lee), KRIBB

NCBI tax ID(s): 2035356 (species)

Section

Reyranella aquatilis Seoho-37 is an obligate aerobe, Gram-negative, rod-shaped bacterium that forms circular colonies and was isolated from eutrophic lake Seo.

colony-forming
Gram-negative
rod-shaped
obligate aerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Rhodospirillales*
	Family	*Reyranellaceae*
	Genus	*Reyranella*
	Species	**Reyranella aquatilis**
	Full Scientific Name (LPSN)	Reyranella aquatilis Cui et al. 2017

Information on morphological and physiological properties Morphology

[Ref.: #43511]	Gram stain	negative

[Ref.: #43511]	Cell length	1-1.5 µm

[Ref.: #43511]	Cell width	0.5-0.7 µm

[Ref.: #43511]	Cell shape	rod-shaped

[Ref.: #43511]	Motility	no

[Ref.: #43511]	Colony size	1-2 mm
[Ref.: #43511]	Colony color	milk-coloured
[Ref.: #43511]	Colony shape	circular
[Ref.: #43511]	Incubation period	2 days
[Ref.: #43511]	Cultivation medium used	R2A agar

Information on culture and growth conditions Culture and growth conditions

[Ref.: #43511]

Culture medium

Reasoner's 2A agar (R2A)

[Ref.: #43511]

Culture medium growth

		Temperature
[Ref.: #43511]	growth	15-36 °C
[Ref.: #67770]	growth	25 °C
[Ref.: #67771]	growth	25 °C

[Ref.: #67770]	Temperature range	mesophilic
[Ref.: #67771]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #43511]			growth	6-10

Information on physiology and metabolism Physiology and metabolism

[Ref.: #43511]	Oxygen tolerance	obligate aerobe
[Ref.: #67771]	Oxygen tolerance	aerobe

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #43511]		NaCl		growth	1	%(w/v)
[Ref.: #43511]		NaCl	no	growth	1.5	%(w/v)

[Ref.: #67770]

Observation

quinones: Q-10, Q-9

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #43511]	3-hydroxybutyrate ChEBI	+	assimilation
[Ref.: #43511]	4-hydroxybenzoate ChEBI	-	carbon source
[Ref.: #43511]	D-glucose ChEBI	-	carbon source
[Ref.: #43511]	D-mannitol ChEBI	-	carbon source
[Ref.: #43511]	D-ribose ChEBI	-	carbon source
[Ref.: #43511]	D-sorbitol ChEBI	+	assimilation
[Ref.: #43511]	glycogen ChEBI	+	assimilation
[Ref.: #43511]	itaconate ChEBI	+	assimilation
[Ref.: #43511]	L-alanine ChEBI	-	carbon source
[Ref.: #43511]	L-arabinose ChEBI	+	assimilation
[Ref.: #43511]	L-fucose ChEBI	+	assimilation
[Ref.: #43511]	L-histidine ChEBI	+	assimilation
[Ref.: #43511]	L-histidine ChEBI	+	carbon source
[Ref.: #43511]	L-proline ChEBI	-	carbon source
[Ref.: #43511]	L-rhamnose ChEBI	-	carbon source
[Ref.: #43511]	L-serine ChEBI	-	carbon source
[Ref.: #43511]	lactate ChEBI	+	assimilation
[Ref.: #43511]	maltose ChEBI	-	carbon source
[Ref.: #43511]	melibiose ChEBI	-	carbon source
[Ref.: #43511]	myo-inositol ChEBI	-	carbon source
[Ref.: #43511]	N-acetylglucosamine ChEBI	-	carbon source
[Ref.: #43511]	nitrate ChEBI	-	reduction
[Ref.: #43511]	potassium 2-dehydro-D-gluconate	+	assimilation
[Ref.: #43511]	potassium 2-dehydro-D-gluconate	+	carbon source
[Ref.: #43511]	potassium 5-dehydro-D-gluconate	-	carbon source
[Ref.: #43511]	propionate ChEBI	+	assimilation
[Ref.: #43511]	salicin ChEBI	-	carbon source
[Ref.: #43511]	sodium acetate ChEBI	-	carbon source
[Ref.: #43511]	sodium citrate ChEBI	+	assimilation
[Ref.: #43511]	sodium citrate ChEBI	+	carbon source
[Ref.: #43511]	sodium malonate ChEBI	-	carbon source
[Ref.: #43511]	suberic acid ChEBI	+	assimilation
[Ref.: #43511]	sucrose ChEBI	-	carbon source
[Ref.: #43511]	valerate ChEBI	+	assimilation
	Only first 10 entries are displayed. Click here to see all.

	Enzyme	Enzyme activity	EC number
[Ref.: #43511]	acid phosphatase	+	3.1.3.2
[Ref.: #43511]	alkaline phosphatase	+	3.1.3.1
[Ref.: #43511]	beta-galactosidase	-	3.2.1.23
[Ref.: #43511]	beta-glucosidase	-	3.2.1.21
[Ref.: #43511]	cytochrome oxidase	+	1.9.3.1
[Ref.: #43511]	esterase (C 4)	+
[Ref.: #43511]	esterase Lipase (C 8)	+
[Ref.: #43511]	leucine arylamidase	+	3.4.11.1
[Ref.: #43511]	naphthol-AS-BI-phosphohydrolase	-
[Ref.: #43511]	trypsin	+	3.4.21.4
[Ref.: #43511]	valine arylamidase	+
	Only first 10 entries are displayed. Click here to see all.

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #43511]

Fatty acid	Percentage	ECL
C18:1ω7c / C18:1ω6c	76.3
11-methyl C18:1ω7c	6.7
C16:0	5.7
C12:1 3OH	4.3
Unknown 11.799	3	11799
C18:0	2.2
C16:1ω7c / C16:1ω6c	1.4

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #43511]	Sample type/isolated from	eutrophic lake Seo
[Ref.: #43511]	Geographic location (country and/or sea, region)	Suwon, Gyeonggi Province
[Ref.: #43511]	Country	Republic of Korea
[Ref.: #43511]	Country ISO 3 Code	KOR
[Ref.: #43511]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Eutrophic lake
[Ref.: #67770]	Country	Republic of Korea
[Ref.: #67770]	Country ISO 3 Code	KOR
[Ref.: #67770]	Continent	Asia

[Ref.: #67771]	Sample type/isolated from	From fresh water
[Ref.: #67771]	Geographic location (country and/or sea, region)	Seoho, Suwon
[Ref.: #67771]	Country	Republic of Korea
[Ref.: #67771]	Country ISO 3 Code	KOR
[Ref.: #67771]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental

#Aquatic

#Lake (large)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KY363639 (>99% sequence identity) for Reyranella from Microbeatlas

Aquatic Samples	3096
Soil Samples	1279
Animal Samples	849
Plant Samples	536
Total Samples	5760

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #43511]	16S rRNA gene sequence	KY363639		GenBank

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Reyranella aquatilis KCTC 52223	GCA_020880995	scaffold	GenBank	2035356 tax ID	*

[Ref.: #43511]

GC-content

66.5 mol%

high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Reyranella aquatilis KCTC 52223 NCBI: GCA_020880995.1
[Ref.: #69480]	flagellated	no	97.451	yes
[Ref.: #69480]	gram-positive	no	97.202	yes
[Ref.: #69480]	anaerobic	no	98.961	yes
[Ref.: #69480]	aerobic	yes	91.842	yes
[Ref.: #69480]	halophile	no	93.911	yes
[Ref.: #69480]	spore-forming	no	93.531	no
[Ref.: #69480]	motile	no	89.273	yes
[Ref.: #69480]	thermophile	no	97.894	yes
[Ref.: #69480]	glucose-util	yes	66.145	yes
[Ref.: #69480]	glucose-ferment	no	90.862	no

Availability in culture collections External links

[Ref.: #43511]

Culture collection no.

KCTC 52223, JCM 31892

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Reyranella aquatilis sp. nov., an alphaproteobacterium isolated from a eutrophic lake.	Cui Y, Chun SJ, Ko SR, Lee HG, Srivastava A, Oh HM, Ahn CY	Int J Syst Evol Microbiol	10.1099/ijsem.0.002151	2017	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#43511

Yingshun Cui, Seong-Jun Chun, So-Ra Ko, Hyung-Gwan Lee, Ankita Srivastava, Hee-Mock Oh, Chi-Yong Ahn: Reyranella aquatilis sp. nov., an alphaproteobacterium isolated from a eutrophic lake. IJSEM 67: 3496 - 3500 2017 ( DOI 10.1099/ijsem.0.002151 , PubMed 28875899 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

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Reyranella aquatilis KCTC 52223

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