Name: Nonomuraea rhodomycinica NR4-ASC07
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 140579

Type strain:

Species: Nonomuraea rhodomycinica

Strain Designation: NR4-ASC07

Culture col. no.: TISTR 2465, NBRC 112327

NCBI tax ID(s): 1712872 (species)

Section

Nonomuraea rhodomycinica NR4-ASC07 is an aerobe, spore-forming, thermophilic bacterium that was isolated from peat swamp forest soil.

filament-shaped
Gram-positive
spore-forming
aerobe
thermophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Streptosporangiales*
	Family	*Streptosporangiaceae*
	Genus	*Nonomuraea*
	Species	**Nonomuraea rhodomycinica**
	Full Scientific Name (LPSN)	Nonomuraea rhodomycinica Sripreechasak et al. 2017

Information on morphological and physiological properties Morphology

[Ref.: #43267]	Gram stain	positive

[Ref.: #43267]	Cell shape	filament-shaped

[Ref.: #43267]	Multicellular complex forming ability	yes
[Ref.: #43267]	Multicellular complex further description	form extensively branched aerial and substrate mycelia

[Ref.: #43267]	Multicellular complex forming ability	yes
[Ref.: #43267]	Multicellular complex name	Aerial mass
[Ref.: #43267]	Multicellular complex color	very pale violet
[Ref.: #43267]	Medium Name (multicellularity)	ISP2

[Ref.: #43267]	Multicellular complex forming ability	yes
[Ref.: #43267]	Multicellular complex name	Aerial mass
[Ref.: #43267]	Multicellular complex color	pale pink
[Ref.: #43267]	Medium Name (multicellularity)	ISP3

[Ref.: #43267]	Multicellular complex forming ability	yes
[Ref.: #43267]	Multicellular complex name	Aerial mass
[Ref.: #43267]	Multicellular complex color	pale pink
[Ref.: #43267]	Medium Name (multicellularity)	ISP4

[Ref.: #43267]	Multicellular complex forming ability	yes
[Ref.: #43267]	Multicellular complex name	Aerial mass
[Ref.: #43267]	Multicellular complex color	pale yellowish pink
[Ref.: #43267]	Medium Name (multicellularity)	ISP7

[Ref.: #43267]	Multicellular complex forming ability	yes
[Ref.: #43267]	Multicellular complex name	Aerial mass
[Ref.: #43267]	Multicellular complex color	pale yellowish pink
[Ref.: #43267]	Medium Name (multicellularity)	nutrient agar

[Ref.: #43267]	Multicellular complex forming ability	yes
[Ref.: #43267]	Multicellular complex name	substrate mycelium
[Ref.: #43267]	Multicellular complex color	deep to reddish orange
[Ref.: #43267]	Medium Name (multicellularity)	agar medium

Information on culture and growth conditions Culture and growth conditions

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Culture medium

ISP

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Culture medium growth

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Culture medium

Nutrient agar (NA)

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Culture medium growth

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Culture medium

ISP2

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Culture medium growth

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Culture medium

ISP3

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Culture medium growth

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Culture medium

ISP4

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Culture medium growth

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Culture medium

ISP7

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Culture medium growth

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Culture medium

agar medium

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Culture medium growth

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Culture medium

ISP6

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Culture medium growth

	Kind of temperature		Temperature
[Ref.: #43267]	no	growth	50 °C
[Ref.: #43267]		growth	20-45 °C
[Ref.: #43267]		optimum	25-37 °C

[Ref.: #43267]	Temperature range	thermophilic
[Ref.: #43267]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #43267]			optimum	5-9

Information on physiology and metabolism Physiology and metabolism

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Oxygen tolerance

aerobe

[Ref.: #43267]	Spore description	Tightly closed spiral spore chains are produced on aerial mycelium
[Ref.: #43267]	Type of spore	spore
[Ref.: #43267]	Ability of spore formation	yes
[Ref.: #43267]	Spore description	spore size is 0.5 - 0.7 by 0.9 - 1 µm.
[Ref.: #43267]	Ability of spore formation	no

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #43267]		NaCl		maximum	4	%(w/v)

[Ref.: #43267]	Observation	Produce Pseudosporangia
[Ref.: #43267]	Observation	Orange pigment produce on ISP2, ISP3 and ISP7
[Ref.: #43267]	Observation	brown pigment produce on ISP6

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #43267]	cellobiose ChEBI	+	assimilation
[Ref.: #43267]	D-glucose ChEBI	+	assimilation
[Ref.: #43267]	fructose ChEBI	+/-	assimilation
[Ref.: #43267]	galactose ChEBI	+	assimilation
[Ref.: #43267]	gelatin ChEBI	-	hydrolysis
[Ref.: #43267]	L-arabinose ChEBI	+	assimilation
[Ref.: #43267]	L-rhamnose ChEBI	+	assimilation
[Ref.: #43267]	myo-inositol ChEBI	+/-	assimilation
[Ref.: #43267]	nitrate ChEBI	+	reduction
[Ref.: #43267]	raffinose ChEBI	-	assimilation
[Ref.: #43267]	ribose ChEBI	-	assimilation
[Ref.: #43267]	salicin ChEBI	+/-	assimilation
[Ref.: #43267]	skimmed milk	-	degradation
[Ref.: #43267]	starch ChEBI	+	hydrolysis
[Ref.: #43267]	sucrose ChEBI	-	assimilation
	Only first 10 entries are displayed. Click here to see all.

	Enzyme	Enzyme activity	EC number
[Ref.: #43267]	acid phosphatase	+	3.1.3.2
[Ref.: #43267]	alkaline phosphatase	+/-	3.1.3.1
[Ref.: #43267]	alpha-chymotrypsin	-	3.4.21.1
[Ref.: #43267]	alpha-fucosidase	-	3.2.1.51
[Ref.: #43267]	alpha-galactosidase	+	3.2.1.22
[Ref.: #43267]	alpha-glucosidase	+	3.2.1.20
[Ref.: #43267]	alpha-mannosidase	+	3.2.1.24
[Ref.: #43267]	beta-galactosidase	+	3.2.1.23
[Ref.: #43267]	beta-glucosidase	+	3.2.1.21
[Ref.: #43267]	beta-glucuronidase	-	3.2.1.31
[Ref.: #43267]	cystine arylamidase	-	3.4.11.3
[Ref.: #43267]	esterase (C 4)	+
[Ref.: #43267]	esterase Lipase (C 8)	-
[Ref.: #43267]	leucine arylamidase	+	3.4.11.1
[Ref.: #43267]	lipase (C 14)	-
[Ref.: #43267]	N-acetyl-beta-glucosaminidase	+	3.2.1.52
[Ref.: #43267]	naphthol-AS-BI-phosphohydrolase	-
[Ref.: #43267]	trypsin	+	3.4.21.4
[Ref.: #43267]	valine arylamidase	+
	Only first 10 entries are displayed. Click here to see all.

Fatty acid profile

Metadata FA analysis

Reference

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Fatty acid	Percentage
C16:0 iso	10.5
C16:0	9.4
10-methyl C17:0	9.4
C17:1ω8c	8.2
C16:1ω7c / C16:1ω6c	7.1
C16:0 2OH	6.2
C15:0 iso	5.2
10-methyl C16:0 / iso-C17:1ω9c	4.9
C14:0	4.5
C17:0	4.3
10-methyl C18:0 TBSA	2.3
C15:0 anteiso	2.3
C15:0 2OH	2.3
C17:0 2OH	1.8
C18:0	1.7
C18:1ω9c	1.6
C17:0 iso 3OH	1.4
C17:0 iso	1.4
C17:0 anteiso	1.3
C14:0 iso	1.2
C17:1 iso ω5c	1.1
C17:1 anteiso ω9c	1.1
C19:1ω7c / C19:1ω6c	1.1
C16:1 iso H	1
C13:0	1
C18:0 iso	0.3

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #43267]	Sample type/isolated from	peat swamp forest soil
[Ref.: #43267]	Geographic location (country and/or sea, region)	Sirindhorn peat swamp forest, Narathiwat Province, Thailand
[Ref.: #43267]	Country	Thailand
[Ref.: #43267]	Country ISO 3 Code	THA
[Ref.: #43267]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Forest
#Environmental	#Terrestrial	#Soil
#Environmental	#Terrestrial	#Wetland (Swamp)
#Condition	#Acidic	-

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #43267]	16S rRNA gene sequences	LC082232	1465	ENA	1712872 tax ID

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GC-content

73.2 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

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Culture collection no.

TISTR 2465, NBRC 112327

Literature:

Topic	Title	Authors	Journal	DOI	Year
Pathogenicity	Antimicrobial substances from the rare actinomycete Nonomuraea rhodomycinica NR4-ASC07(T).	Supong K, Sripreechasak P, Phongsopitanun W, Tanasupawat S, Danwisetkanjana K, Bunbamrung N, Pittayakhajonwut P	Nat Prod Res	10.1080/14786419.2018.1440223	2018	*
Phylogeny	Nonomuraea rhodomycinica sp. nov., isolated from peat swamp forest soil.	Sripreechasak P, Phongsopitanun W, Supong K, Pittayakhajonwut P, Kudo T, Ohkuma M, Tanasupawat S	Int J Syst Evol Microbiol	10.1099/ijsem.0.001843	2017	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#43267

Paranee Sripreechasak, Wongsakorn Phongsopitanun, Khomsan Supong, Pattama Pittayakhajonwut, Takuji Kudo, Moriya Ohkuma and Somboon Tanasupawat: Nonomuraea rhodomycinica sp. nov., isolated from peat swamp forest soil. IJSEM 67: 1683 - 1687 2017 ( DOI 10.1099/ijsem.0.001843 , PubMed 28155814 )

* These data were automatically processed and therefore are not curated

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