Name: Tetrasphaera sp. YC 6726
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 140136

Type strain:

Species: Tetrasphaera sp.

Strain Designation: YC 6726

Culture col. no.: DSM 21413

Strain history: <- Y. R. Chung, Gyeongsang Natl. Univ. (GNU), Jinju, Korea; YC 6726 <- Z. Aslam

NCBI tax ID(s): 1917966 (species)

SI-ID 402044

DSM 21413

Special Collections

DSMZ

Other strains from Tetrasphaera sp.

Section

Tetrasphaera sp. YC 6726 is a bacterium that was isolated from rice field under tillage.

16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Micrococcales*
	Family	*Intrasporangiaceae*
	Genus	Tetrasphaera
	Full Scientific Name (LPSN)	Tetrasphaera Maszenan et al. 2000

	Synonym	"Candidatus* Nostocoides"*
	Synonym	"Candidatus* Nostocoida"*

Information on culture and growth conditions Culture and growth conditions

[Ref.: #42743]

Culture medium

TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)

[Ref.: #42743]

Culture medium growth

[Ref.: #42743]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #42743]

Culture medium

R2A MEDIUM (DSMZ Medium 830)

[Ref.: #42743]

Culture medium growth

[Ref.: #42743]

Culture medium link

Medium recipe at MediaDive

[Ref.: #42743]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #42743]			growth	28 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #42743]	Sample type/isolated from	rice field under tillage
[Ref.: #42743]	Geographic location (country and/or sea, region)	Jinju
[Ref.: #42743]	Country	Republic of Korea
[Ref.: #42743]	Country ISO 3 Code	KOR
[Ref.: #42743]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Engineered	#Agriculture	#Field
#Host	#Plants	#Herbaceous plants (Grass,Crops)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence EU707564 (>99% sequence identity) for Intrasporangiaceae from Microbeatlas

Aquatic Samples	207
Soil Samples	104
Animal Samples	216
Plant Samples	6
Total Samples	533

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #42743]	Tetrasphaera sp. YC6726 16S ribosomal RNA gene, partial sequence	EU707564	1390	GenBank ENA	535908 tax ID

Availability in culture collections External links

[Ref.: #42743]

Culture collection no.

DSM 21413

[Ref.: #96529]

SI-ID 402044

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#42743

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 21413

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#96529

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID402044.1 )

* These data were automatically processed and therefore are not curated

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