Paenibacillus ripae (DSM 104672, CCTCC AB 2014276, LMG 28639)

Name: Paenibacillus ripae (DSM 104672, CCTCC AB 2014276, LMG 28639)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 140124

Type strain

Strain Designation HZ1

Culture col. no. DSM 104672 CCTCC AB 2014276 LMG 28639 LMG 29834 HZ1

NCBI tax ID(s) 1617979

Special Collections DSMZ

History <- LMG, Gent, Belgium; LMG 29834 <- Zhang Hua, Lanzhou Univ., School of Life Sciences, China <- Y. Sun

Links

Paenibacillus ripae HZ1 is a mesophilic prokaryote that was isolated from bank side soil.

mesophilic 16S sequence

Name and taxonomic classification

SI-ID 405684

LMG 29834,DSM 104672

@ref 20215

Last LPSN update 2026-02-09 11:33:31

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Paenibacillaceae

Genus Paenibacillus

Species Paenibacillus ripae

Full scientific name Paenibacillus ripae Sun et al. 2015

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
42731	CASO AGAR (MERCK 105458) (DSMZ Medium 220)		Medium recipe at MediaDive	Name: CASO AGAR (Merck 105458) (DSMZ Medium 220; with strain-specific modifications) Composition: Agar 15.0 g/l Casein peptone 15.0 g/l NaCl 5.0 g/l Soy peptone 5.0 g/l Urea 1.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
42731	positive	growth	30	mesophilic

Physiology and metabolism

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#River (Creek)
#Environmental	#Terrestrial	#Soil

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Latitude	Longitude
42731	bank side soil	Zhejiang province, Hangzhou city	China	CHN	Asia	30.2648	120.046 30.2648/120.046

Taxonmaps

69479

Global distribution of 16S sequence KP076219 (>99% sequence identity) for Paenibacillus ripae subclade from Microbeatlas

Aquatic Samples	3
Soil Samples	19
Animal Samples	43
Plant Samples	1
Total Samples	66

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
42731	1	Risk group (German classification)

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
42731	Paenibacillus ripae strain HZ1 16S ribosomal RNA gene, partial sequence	KP076219	1522		1617979

GC content

@ref	GC-content (mol%)	Method
42731	40.1	high performance liquid chromatography (HPLC)

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Paenibacillus ripae sp. nov., isolated from bank side soil.	Sun Y, Guo Z, Zhao Q, Gao Q, Xie Q, Yang R, Liu R, Wu Z, Chen P, Li Y, Wang X, Li H	Int J Syst Evol Microbiol	10.1099/ijsem.0.000645	2015

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#42731	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 104672
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Paenibacillus ripae (DSM 104672, CCTCC AB 2014276, LMG 28639)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

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