Name: Paenibacillus ripae HZ1
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 140124

Type strain:

Species: Paenibacillus ripae

Strain Designation: HZ1

Culture col. no.: DSM 104672, CCTCC AB 2014276, LMG 28639, LMG 29834

Strain history: <- LMG, Gent, Belgium; LMG 29834 <- Zhang Hua, Lanzhou Univ., School of Life Sciences, China <- Y. Sun

NCBI tax ID(s): 1617979 (species)

SI-ID 405684

DSM 104672

Section

Paenibacillus ripae HZ1 is a mesophilic bacterium that was isolated from bank side soil.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Paenibacillaceae*
	Genus	*Paenibacillus*
	Species	**Paenibacillus ripae**
	Full Scientific Name (LPSN)	Paenibacillus ripae Sun et al. 2015

Information on culture and growth conditions Culture and growth conditions

[Ref.: #42731]

Culture medium

CASO AGAR (MERCK 105458) (DSMZ Medium 220)

[Ref.: #42731]

Culture medium growth

[Ref.: #42731]

Culture medium link

Medium recipe at MediaDive

[Ref.: #42731]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #42731]			growth	30 °C

[Ref.: #42731]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #42731]	Sample type/isolated from	bank side soil
[Ref.: #42731]	Geographic location (country and/or sea, region)	Zhejiang province, Hangzhou city
[Ref.: #42731]	Country	China
[Ref.: #42731]	Country ISO 3 Code	CHN
[Ref.: #42731]	Continent	Asia
[Ref.: #42731]	Geographic location	30.2648°/120.0460°
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#River (Creek)
#Environmental	#Terrestrial	#Soil

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KP076219 (>99% sequence identity) for Paenibacillus ripae subclade from Microbeatlas

Aquatic Samples	3
Soil Samples	19
Animal Samples	43
Plant Samples	1
Total Samples	66

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #42731]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #42731]	Paenibacillus ripae strain HZ1 16S ribosomal RNA gene, partial sequence	KP076219	1522	ENA	1617979 tax ID

[Ref.: #42731]

GC-content

40.1 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #42731]

Culture collection no.

DSM 104672, CCTCC AB 2014276, LMG 28639, LMG 29834

[Ref.: #96518]

SI-ID 405684

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Paenibacillus ripae sp. nov., isolated from bank side soil.	Sun Y, Guo Z, Zhao Q, Gao Q, Xie Q, Yang R, Liu R, Wu Z, Chen P, Li Y, Wang X, Li H	Int J Syst Evol Microbiol	10.1099/ijsem.0.000645	2015	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#42731

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 104672

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#96518

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID405684.1 )

* These data were automatically processed and therefore are not curated

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