Zhongshania borealis (DSM 105348, CL-AS9, JCM 17304)

Name: Zhongshania borealis (DSM 105348, CL-AS9, JCM 17304)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 140038

Type strain

Strain Designation CL-AS9

Culture col. no. DSM 105348 CL-AS9 JCM 17304 KCCM 90094

NCBI tax ID(s) 889488

Special Collections DSMZ JCM

Links

Zhongshania borealis CL-AS9 is a psychrophilic prokaryote that was isolated from coastal seawater.

psychrophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 407052

JCM 17304,DSM 105348

@ref 20215

Last LPSN update 2025-12-16 10:03:29

Domain Pseudomonadati

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Cellvibrionales

Family Spongiibacteraceae

Genus Zhongshania

Species Zhongshania borealis

Full scientific name Zhongshania borealis (Jang et al. 2011) Lo et al. 2014

Synonyms (1)

Spongiibacter borealis

Morphology

Multimedia

@ref:	42645
multimedia content:	DSM_105348.jpg
multimedia.multimedia content:	https://www.dsmz.de/microorganisms/photos/DSM_105348.jpg
intellectual property rights:	© Leibniz-Institut DSMZ
manual_annotation:	1

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
42645	MARINE BROTH (ROTH CP73) (DSMZ Medium 514f)		Medium recipe at MediaDive	Name: MARINE BROTH (ROTH CP73) (DSMZ Medium 514f) Composition: NaCl 19.4 g/l Agar 15.0 g/l MgCl2 8.8 g/l Peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
42645	positive	growth	20	psychrophilic
67770	positive	growth	25	mesophilic

Physiology and metabolism

Observation

67770

Observationquinones: Q-8

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Marine
#Environmental	#Terrestrial	#Coast

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Latitude	Longitude
42645	coastal seawater	Ny-Alesund	Svalbard and Jan Mayen Islands	NOR	Europe	78.9167	11.9333 78.9167/11.9333
67770	Arctic seawater

Taxonmaps

69479

Global distribution of 16S sequence HQ199599 (>99% sequence identity) for Zhongshania from Microbeatlas

Aquatic Samples	3986
Soil Samples	107
Animal Samples	283
Plant Samples	21
Total Samples	4397

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
42645	1	Risk group (German classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	NCBI tax ID	Score
124043	ASM3953962v1 assembly for Zhongshania borealis JCM 17304	scaffold	GCA_039539625	889488	73.32

Genome browser: GCA_039539625

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
42645	Spongiibacter borealis strain CL-AS9 16S ribosomal RNA gene, partial sequence	HQ199599	1429		889488

GC content

@ref	GC-content (mol%)	Method
67770	53.6	high performance liquid chromatography (HPLC)

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Zhongshania marina sp. nov., isolated from deep-sea water.	On YG, Oh JS, Roh DH	Int J Syst Evol Microbiol	10.1099/ijsem.0.003195	2018
Phylogeny	Zhongshania ponticola sp. nov., a novel lipolytic bacterium of the class Gammaproteobacteria isolated from seawater.	Park S, Park JM, Lee JS, Yoon JH	Arch Microbiol	10.1007/s00203-018-1538-7	2018
Phylogeny	Zhongshania aliphaticivorans sp. nov., an aliphatic hydrocarbon-degrading bacterium isolated from marine sediment, and transfer of Spongiibacter borealis Jang et al. 2011 to the genus Zhongshania as Zhongshania borealis comb. nov.	Lo N, Kang HJ, Jeon CO	Int J Syst Evol Microbiol	10.1099/ijs.0.068593-0	2014
Phylogeny	Description of Spongiibacter borealis sp. nov., isolated from Arctic seawater, and reclassification of Melitea salexigens Urios et al. 2008 as a later heterotypic synonym of Spongiibacter marinus Graeber et al. 2008 with emended descriptions of the genus Spongiibacter and Spongiibacter marinus.	Jang GI, Hwang CY, Choi HG, Kang SH, Cho BC	Int J Syst Evol Microbiol	10.1099/ijs.0.028795-0	2011
Phylogeny	Zhongshania aquimaris sp. nov., isolated from seawater.	Weerawongwiwat V, Kim JH, Lee JS, Yoon JH, Sukhoom A, Kim W	Arch Microbiol	10.1007/s00203-022-03184-2	2022

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#42645	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 105348
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Zhongshania borealis (DSM 105348, CL-AS9, JCM 17304)

Name and taxonomic classification

Morphology

Multimedia

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Observation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_039539625

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

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