Name: Marinobacter sp. TT-1
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 139851

Type strain:

Species: Marinobacter sp.

Strain Designation: TT-1

Culture col. no.: DSM 26291

Strain history: <- T. Gutierrez, School of Life Sci., Heriot-Watt Univ., Edinburgh, UK; TT-1 <- T. Yang, Univ. North Carolina at Chapel Hill, USA

NCBI tax ID(s): 1761792 (species)

SI-ID 401498

DSM 26291

Other strains from Marinobacter sp.

M. sp. CAB, DSM 11874
M. sp. 2Sq31, DSM 14806
M. sp. 4031, DSM 12176
M. sp. KGB22, DSM 17588, KCTC 12517
M. sp. 908115, DSM 22333, CGMCC 1.7728
M. sp. H146B83, DSM 22446, CGMCC 1.8468
M. sp. H57B71, DSM 22447, CGMCC 1.8467
M. sp. H184B83, DSM 22449, CGMCC 1.8469
M. sp. H184B35, DSM 22450, CGMCC 1.8465
M. sp. TK-36, DSM 26671
M. sp. CCUG 58689
M. sp. DSM 21168, JSM 077031
M. sp. JCM 10458
M. sp. JCM 15135, KCTC 22253
M. sp. JCM 15897, CGMCC 1.8500
M. sp. JCM 31320
M. sp. JCM 31321

Section

Marinobacter sp. TT-1 is a mesophilic, motile bacterium that was isolated from deep water plume.

motile
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Alteromonadales*
	Family	*Alteromonadaceae*
	Genus	*Marinobacter*
	Full Scientific Name (LPSN)	Marinobacter Gauthier et al. 1992

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %99.995

[Ref.: #69480]	Motility	yes Confidence in %94.298

Information on culture and growth conditions Culture and growth conditions

[Ref.: #42459]

Culture medium

BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)

[Ref.: #42459]

Culture medium growth

[Ref.: #42459]

Culture medium link

Medium recipe at MediaDive

[Ref.: #42459]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #42459]			growth	28 °C

[Ref.: #42459]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.998

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #42459]	Sample type/isolated from	deep water plume
[Ref.: #42459]	Geographic location (country and/or sea, region)	Gulf of Mexico
[Ref.: #42459]	Country	USA
[Ref.: #42459]	Country ISO 3 Code	USA
[Ref.: #42459]	Continent	North America
* marker position based on {}

Isolation sources categories

#Engineered	#Contamination	#Oil (Fuel)
#Environmental	#Aquatic	-

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #42459]		JX47654		ENA

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Marinobacter salarius DSM 26291	GCA_900114695	contig	GenBank	1420917 tax ID	*
[Ref.: #66792]	Marinobacter sp. DSM 26291	1761792.3	wgs	PATRIC	1761792 tax ID	*
[Ref.: #66792]	Marinobacter sp. DSM 26291	2619618959	draft	JGI IMG/M	1761792 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Marinobacter sp. DSM 26291 PATRIC: 1761792.3
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Marinobacter sp. DSM 26291 PATRIC: 1761792.3
[Ref.: #69480]	motile	yes	91.868	no
[Ref.: #69480]	gram-positive	no	98.783	no
[Ref.: #69480]	anaerobic	no	98.825	no
[Ref.: #69480]	aerobic	yes	94.5	no
[Ref.: #69480]	halophile	yes	91.608	no
[Ref.: #69480]	spore-forming	no	96.357	no
[Ref.: #69480]	thermophile	no	98.593	yes
[Ref.: #69480]	glucose-util	yes	63.565	no
[Ref.: #69480]	flagellated	yes	85.667	no
[Ref.: #69480]	glucose-ferment	no	86.674	no

Availability in culture collections External links

[Ref.: #42459]

Culture collection no.

DSM 26291

[Ref.: #96292]

SI-ID 401498

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#42459

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 26291

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#96292

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID401498.1 )

* These data were automatically processed and therefore are not curated

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Marinobacter sp. DSM 26291

Marinobacter sp. DSM 26291

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