Name: Ureibacillus suwonensis 6T-19
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 1398

Type strain:

Species: Ureibacillus suwonensis

Strain Designation: 6T-19

Culture col. no.: DSM 16752, CIP 109211, KACC 11287

Strain history: CIP <- 2006, DSMZ <- S. W. Kwon: strain 6T-19

NCBI tax ID(s): 313007 (species)

SI-ID 291014

DSM 16752, KACC 11287, CIP 109211

Special Collections

Other strains from Ureibacillus suwonensis

Section

Ureibacillus suwonensis 6T-19 is an obligate aerobe, spore-forming, Gram-negative bacterium that was isolated from compost, cotton.

Gram-negative
motile
rod-shaped
spore-forming
obligate aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Caryophanaceae*
	Genus	*Ureibacillus*
	Species	**Ureibacillus suwonensis**
	Full Scientific Name (LPSN)	Ureibacillus suwonensis Kim et al. 2006

Information on morphological and physiological properties Morphology

[Ref.: #23025]	Gram stain	negative
[Ref.: #123393]	Gram stain	negative

[Ref.: #23025]	Cell length	1.5-2.0 µm

[Ref.: #23025]	Cell width	0.5-0.7 µm

[Ref.: #23025]	Cell shape	rod-shaped
[Ref.: #123393]	Cell shape	rod-shaped

[Ref.: #23025]	Motility	yes
[Ref.: #123393]	Motility	yes

[Ref.: #23025]	Flagellum arrangement	peritrichous

Information on culture and growth conditions Culture and growth conditions

[Ref.: #6493]

Culture medium

CASO AGAR (MERCK 105458) (DSMZ Medium 220)

[Ref.: #6493]

Culture medium growth

[Ref.: #6493]

Culture medium link

Medium recipe at MediaDive

[Ref.: #6493]

Culture medium composition

expand / minimize

[Ref.: #37477]

Culture medium

MEDIUM 72- for trypto casein soja agar

[Ref.: #37477]

Culture medium growth

[Ref.: #37477]

Culture medium composition

expand / minimize

[Ref.: #123393]

Culture medium

CIP Medium 72

[Ref.: #123393]

Culture medium growth

[Ref.: #123393]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #6493]		growth	55 °C
[Ref.: #23025]		growth	35.0-60.0 °C
[Ref.: #23025]		growth	35.0 °C
[Ref.: #23025]	no	growth	65.0 °C
[Ref.: #37477]		growth	37 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #23025]	Oxygen tolerance	obligate aerobe
[Ref.: #123393]	Oxygen tolerance	obligate aerobe

[Ref.: #23025]	Spore description	spherical or oval,subterminal or terminal,in swollen sporangia
[Ref.: #23025]	Type of spore	spore
[Ref.: #23025]	Ability of spore formation	yes

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #23025]		NaCl		growth	5.0	%

[Ref.: #23025]	Murein short key	A11.31
[Ref.: #23025]	Murein types	A4alpha L-Lys-D-Asp

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #23025]	casein	-	hydrolysis
[Ref.: #23025]	D-glucose ChEBI	-	builds acid from
[Ref.: #23025]	D-mannitol ChEBI	-	builds acid from
[Ref.: #23025]	D-xylose ChEBI	-	builds acid from
[Ref.: #23025]	esculin ChEBI	-	hydrolysis
[Ref.: #23025]	gelatin ChEBI	-	hydrolysis
[Ref.: #23025]	L-arabinose ChEBI	-	builds acid from
[Ref.: #23025]	nitrate ChEBI	-	reduction
[Ref.: #123393]	nitrate ChEBI	-	reduction
[Ref.: #123393]	nitrite ChEBI	-	reduction
[Ref.: #23025]	starch ChEBI	-	hydrolysis
[Ref.: #23025]	urea ChEBI	-	hydrolysis
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Production
[Ref.: #23025]	acetoin ChEBI	no
[Ref.: #23025]	indole ChEBI	no
[Ref.: #123393]	indole ChEBI	no

	Physiological tests	Metabolite	Voges-Proskauer-test
[Ref.: #23025]		acetoin ChEBI	-

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #123393]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	-	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #23025]	arginine dihydrolase	+	3.5.3.6
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #23025]	catalase	+	1.11.1.6
[Ref.: #123393]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #23025]	cytochrome oxidase	+	1.9.3.1
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #68382]	leucine arylamidase	-	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #123393]	lysine decarboxylase	-	4.1.1.18
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #123393]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #123393]	oxidase	+
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #123393]	urease	-	3.5.1.5
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #123393]	11721	-	+	+	+	-	-	-	-	-	-	+	+	-	-	-	-	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #6493]	Sample type/isolated from	compost, cotton
[Ref.: #6493]	Geographic location (country and/or sea, region)	Suwon
[Ref.: #6493]	Country	Republic of Korea
[Ref.: #6493]	Country ISO 3 Code	KOR
[Ref.: #6493]	Continent	Asia

[Ref.: #23025]	Sample type/isolated from	cotton composts for the cultivation of oyster mushroom (Pleurotus ostreatus)
[Ref.: #23025]	Enrichment culture	TSA medium
[Ref.: #23025]	Enrichment culture temperature	50.0 ̊C

[Ref.: #123393]	Sample type/isolated from	Environment, Cotton composts
[Ref.: #123393]	Geographic location (country and/or sea, region)	Suwon
[Ref.: #123393]	Country	Republic of Korea
[Ref.: #123393]	Country ISO 3 Code	KOR
[Ref.: #123393]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Engineered	#Biodegradation	#Composting
#Engineered	#Food production	#Food
#Host	#Fungi	#Mushroom
#Host	#Plants	#Shrub (Scrub)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AY850379 (>99% sequence identity) for Ureibacillus suwonensis from Microbeatlas

Aquatic Samples	118
Soil Samples	366
Animal Samples	334
Plant Samples	93
Total Samples	911

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #6493]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #123393]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #6493]	Ureibacillus suwonensis strain 6T19 16S ribosomal RNA gene, partial sequence	AY850379	1480	GenBank ENA	313007 tax ID

[Ref.: #6493]	GC-content	41.5 mol%
[Ref.: #23025]	GC-content	41.5 mol%	high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #6493]

Culture collection no.

DSM 16752, CIP 109211, KACC 11287

[Ref.: #71049]

SI-ID 291014

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Ureibacillus suwonensis sp. nov., isolated from cotton waste composts.	Kim BY, Lee SY, Weon HY, Kwon SW, Go SJ, Park YK, Schumann P, Fritze D	Int J Syst Evol Microbiol	10.1099/ijs.0.63703-0	2006	*

References

#6493

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 16752

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#23025

Byung-Yong Kim,Seon-Young Lee,Hang-Yeon Weon,Soon-Wo Kwon,Seung-Joo Go,Yong-Keun Park,Peter Schumann,Dagmar Fritze: Ureibacillus suwonensis sp. nov., isolated from cotton waste composts. IJSEM 56: 663 - 666 2006 ( DOI 10.1099/ijs.0.63703-0 , PubMed 16514046 )

#37477 ; Curators of the CIP;

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#71049

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID291014.1 )

#123393 Collection of Institut Pasteur ; Curators of the CIP; CIP 109211
* These data were automatically processed and therefore are not curated

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