Name: Hyphomicrobium zavarzinii ZV 580
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 139789

Type strain:

Species: Hyphomicrobium zavarzinii

Strain Designation: ZV 580

Culture col. no.: DSM 10088

Strain history: <- A. C. Schwartz, Bot. Inst., Univ. Bonn, Germany; ZV 580 <- G. A. Zavarzin

NCBI tax ID(s): 48292 (species)

SI-ID 402177

DSM 10088

Special Collections

DSMZ

Other strains from Hyphomicrobium zavarzinii

Section

Hyphomicrobium zavarzinii ZV 580 is a bacterium that was isolated from moor pond.

16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Hyphomicrobiales*
	Family	*Hyphomicrobiaceae*
	Genus	*Hyphomicrobium*
	Species	**Hyphomicrobium zavarzinii**
	Full Scientific Name (LPSN)	Hyphomicrobium zavarzinii Hirsch 1989

Information on culture and growth conditions Culture and growth conditions

[Ref.: #42397]

Culture medium

HYPHOMICROBIUM MEDIUM (DSMZ Medium 162)

[Ref.: #42397]

Culture medium growth

[Ref.: #42397]

Culture medium link

Medium recipe at MediaDive

[Ref.: #42397]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #42397]			growth	30 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #42397]	Sample type/isolated from	moor pond
[Ref.: #42397]	Geographic location (country and/or sea, region)	Moscow
[Ref.: #42397]	Country	Russia
[Ref.: #42397]	Country ISO 3 Code	RUS
[Ref.: #42397]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Pond (small)
#Environmental	#Terrestrial	#Wetland (Swamp)

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #42397]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #42397]	Hyphomicrobium zavarzinii strain ATCC 27495, 16S rRNA gene	U59506	1403	GenBank ENA	48292 tax ID

Availability in culture collections External links

[Ref.: #42397]

Culture collection no.

DSM 10088

[Ref.: #96232]

SI-ID 402177

Literature:

Topic	Title	Authors	Journal	DOI	Year
Enzymology	Direct detection of formaldehyde in air by a novel NAD+- and glutathione-independent formaldehyde dehydrogenase-based biosensor.	Achmann S, Hermann M, Hilbrig F, Jerome V, Hammerle M, Freitag R, Moos R	Talanta	10.1016/j.talanta.2007.12.015	2007	*
Enzymology	A fast method for the quantification of methylamine in fermentation broths by gas chromatography.	Jerome V, Hermann M, Hilbrig F, Freitag R	J Chromatogr B Analyt Technol Biomed Life Sci	10.1016/j.jchromb.2007.11.027	2007	*
Enzymology	Development of a fed-batch process for the production of a dye-linked formaldehyde dehydrogenase in Hyphomicrobium zavarzinii ZV 580.	Jerome V, Hermann M, Hilbrig F, Freitag R	Appl Microbiol Biotechnol	10.1007/s00253-007-1218-z	2007	*
Enzymology	Relations and functions of dye-linked formaldehyde dehydrogenase from Hyphomicrobium zavarzinii revealed by sequence determination and analysis.	Schwartz AC, Gockel G, Gross J, Moritz B, Meyer HE	Arch Microbiol	10.1007/s00203-004-0730-0	2004	*
Enzymology	A novel dye-linked formaldehyde dehydrogenase with some properties indicating the presence of a protein-bound redox-active quinone cofactor.	Klein CR, Kesseler FP, Perrei C, Frank J, Duine JA, Schwartz AC	Biochem J	10.1042/bj3010289	1994	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#42397

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 10088

#96232

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID402177.1 )

* These data were automatically processed and therefore are not curated

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