Name: Xanthobacter sp. W30
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 139788

Type strain:

Species: Xanthobacter sp.

Strain Designation: W30

Culture col. no.: DSM 24535

Strain history: <- R. Margesin, Inst. Microbiology, Univ. Innsbruck, Austria; W30

NCBI tax ID(s): 35809 (species)

SI-ID 405460

DSM 24535

Other strains from Xanthobacter sp.

X. sp. 124X, DSM 6696, ATCC 49450
X. sp. DSM 14517, CB 2
X. sp. DSM 14518, CB 3
X. sp. DSM 14519, CB 5
X. sp. DSM 14520, CB 6
X. sp. R-10, DSM 14521
X. sp. CCUG 59146

Section

Xanthobacter sp. W30 is a psychrophilic bacterium that was isolated from soil.

psychrophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Hyphomicrobiales*
	Family	*Xanthobacteraceae*
	Genus	*Xanthobacter*
	Full Scientific Name (LPSN)	Xanthobacter Wiegel et al. 1978 (Approved Lists 1980)

Information on culture and growth conditions Culture and growth conditions

[Ref.: #42396]

Culture medium

R2A MEDIUM (DSMZ Medium 830)

[Ref.: #42396]

Culture medium growth

[Ref.: #42396]

Culture medium link

Medium recipe at MediaDive

[Ref.: #42396]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #42396]			growth	20 °C

[Ref.: #42396]

Temperature range

psychrophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #42396]	Sample type/isolated from	soil
[Ref.: #42396]	Geographic location (country and/or sea, region)	South Tyrol, Welsberg
[Ref.: #42396]	Country	Italy
[Ref.: #42396]	Country ISO 3 Code	ITA
[Ref.: #42396]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence HQ882805 (>99% sequence identity) for Xanthobacter polyaromaticivorans subclade from Microbeatlas

Aquatic Samples	76
Soil Samples	36
Animal Samples	20
Plant Samples	5
Total Samples	137

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #42396]	Xanthobacter sp. W30 16S ribosomal RNA gene, partial sequence	HQ882805	1478	ENA	990372 tax ID

Availability in culture collections External links

[Ref.: #42396]

Culture collection no.

DSM 24535

[Ref.: #96231]

SI-ID 405460

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#42396

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 24535

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#96231

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID405460.1 )

* These data were automatically processed and therefore are not curated

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