Name: Sporomusa sp. An4
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 139774

Type strain:

Species: Sporomusa sp.

Strain Designation: An4

Culture col. no.: DSM 21435, JCM 15643

Strain history: M. Balk An4.

NCBI tax ID(s): 2078658 (species)

SI-ID 406746

DSM 21435

Special Collections

DSMZ
JCM

Other strains from Sporomusa sp.

Section

Sporomusa sp. An4 is an anaerobe, Gram-negative bacterium that was isolated from underground gas storage.

Gram-negative
anaerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Negativicutes*
	Order	*Selenomonadales*
	Family	*Sporomusaceae*
	Genus	*Sporomusa*
	Full Scientific Name (LPSN)	Sporomusa Möller et al. 1985

Information on culture and growth conditions Culture and growth conditions

[Ref.: #42383]

Culture medium

SPOROMUSA MEDIUM (BETAINE) (DSMZ Medium 311)

[Ref.: #42383]

Culture medium growth

[Ref.: #42383]

Culture medium link

Medium recipe at MediaDive

[Ref.: #42383]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #42383]			growth	35 °C
[Ref.: #67770]			growth	30 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #42383]	Sample type/isolated from	underground gas storage
[Ref.: #42383]	Country	Russia
[Ref.: #42383]	Country ISO 3 Code	RUS
[Ref.: #42383]	Continent	Europe

[Ref.: #67770]	Sample type/isolated from	Underground gas storage reservoir
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Geologic

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence EF060193 (>99% sequence identity) for Sporomusa ovata subclade from Microbeatlas

Aquatic Samples	32
Soil Samples	28
Animal Samples	55
Plant Samples	7
Total Samples	122

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #42383]	Sporomusa sp. An4 16S ribosomal RNA gene, partial sequence	EF060193	1386	GenBank ENA	411922 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Sporomusa ovata D16	GCA_001373435	scaffold	GenBank ENA	2378 tax ID

[Ref.: #67770]

GC-content

42.6 mol%

high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Sporomusa ovata D16 NCBI: GCA_001373435.1
[Ref.: #69480]	gram-positive	gram-positiveⓘ	no	81.715	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	yes	80.142	no
[Ref.: #69480]	aerobic	aerobicⓘ	no	85.066	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	yes	69.854	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	84.829	no
[Ref.: #69480]	flagellated	motile2+ⓘ	yes	75.568	no

Availability in culture collections External links

[Ref.: #42383]

Culture collection no.

DSM 21435, JCM 15643

[Ref.: #96219]

SI-ID 406746

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#42383

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 21435

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#96219

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID406746.1 )

* These data were automatically processed and therefore are not curated

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Sporomusa ovata D16

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