Sporomusa sp. (DSM 21435, An4, JCM 15643)

Name: Sporomusa sp. (DSM 21435, An4, JCM 15643)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 139774

Type strain

Strain Designation An4

Culture col. no. DSM 21435 An4 JCM 15643

NCBI tax ID(s) 2078658

Special Collections DSMZ JCM

Links

An4 is a mesophilic prokaryote that was isolated from underground gas storage.

mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 406746

DSM 21435

@ref 20215

Last LPSN update 2025-12-16 10:03:25

Domain Bacillati

Phylum Bacillota

Class Negativicutes

Order Selenomonadales

Family Sporomusaceae

Genus Sporomusa

Full scientific name Sporomusa Möller et al. 1985

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
42383	SPOROMUSA MEDIUM (BETAINE) (DSMZ Medium 311)		Medium recipe at MediaDive	Name: SPOROMUSA MEDIUM (BETAINE) (DSMZ Medium 311) Composition: Betaine x H2O 6.66667 g/l NaCl 2.23881 g/l Yeast extract 1.99005 g/l Casitone 1.99005 g/l Na2CO3 0.995025 g/l MgSO4 x 7 H2O 0.497512 g/l NH4Cl 0.497512 g/l K2HPO4 0.348259 g/l Na2S x 9 H2O 0.298507 g/l L-Cysteine HCl x H2O 0.298507 g/l CaCl2 x 2 H2O 0.248756 g/l KH2PO4 0.228856 g/l HCl 0.00248756 g/l FeSO4 x 7 H2O 0.00199005 g/l FeCl2 x 4 H2O 0.00149254 g/l NaOH 0.000497512 g/l Sodium resazurin 0.000497512 g/l CoCl2 x 6 H2O 0.000189055 g/l Pyridoxine hydrochloride 9.95025e-05 g/l MnCl2 x 4 H2O 9.95025e-05 g/l ZnCl2 6.96517e-05 g/l p-Aminobenzoic acid 4.97512e-05 g/l Calcium D-(+)-pantothenate 4.97512e-05 g/l Nicotinic acid 4.97512e-05 g/l Riboflavin 4.97512e-05 g/l Thiamine HCl 4.97512e-05 g/l (DL)-alpha-Lipoic acid 4.97512e-05 g/l Na2MoO4 x 2 H2O 3.58209e-05 g/l NiCl2 x 6 H2O 2.38806e-05 g/l Biotin 1.99005e-05 g/l Folic acid 1.99005e-05 g/l H3BO3 5.97015e-06 g/l Na2WO4 x 2 H2O 3.9801e-06 g/l Na2SeO3 x 5 H2O 2.98507e-06 g/l CuCl2 x 2 H2O 1.99005e-06 g/l Vitamin B12 9.95025e-07 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
42383	positive	growth	35	mesophilic
67770	positive	growth	30	mesophilic

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	anaerobe	97.3

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Geologic

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent
42383	underground gas storage	Russia	RUS	Europe
67770	Underground gas storage reservoir

Taxonmaps

69479

Global distribution of 16S sequence EF060193 (>99% sequence identity) for Sporomusa ovata subclade from Microbeatlas

Aquatic Samples	32
Soil Samples	28
Animal Samples	55
Plant Samples	7
Total Samples	122

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	spAn4DRAFT_v1 assembly for Sporomusa ovata	scaffold	GCA_001373435	411922.4	8074278546	2378	62.55

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
42383	Sporomusa sp. An4 16S ribosomal RNA gene, partial sequence	EF060193	1386		411922

GC content

@ref	GC-content (mol%)	Method
67770	42.6	high performance liquid chromatography (HPLC)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Sporomusa ovata D16
NCBI: GCA_001373435

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	yes	62.60	no
125439	motility	BacteriaNetⓘ	no	62.80	no
125439	gram_stain	BacteriaNetⓘ	positive	70.50	no
125439	oxygen_tolerance	BacteriaNetⓘ	anaerobe	97.30	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Sporomusa ovata D16
NCBI: GCA_001373435.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	81.72	no
125438	anaerobic	anaerobicⓘ	yes	80.14	no
125438	aerobic	aerobicⓘ	no	85.07	no
125438	spore-forming	spore-formingⓘ	yes	69.85	no
125438	thermophilic	thermophileⓘ	no	84.83	no
125438	flagellated	motile2+ⓘ	yes	75.57	no

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#42383	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 21435
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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