Bartonella quintana (CIP 103739, CCUG 45777, Toulouse)

Name: Bartonella quintana (CIP 103739, CCUG 45777, Toulouse)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 139102

Type strain

Strain Designation Toulouse

Culture col. no. CIP 103739 CCUG 45777 Toulouse

NCBI tax ID(s) 803

Special Collections CCUG CIP

Links

Bartonella quintana Toulouse is a microaerophile, mesophilic, Gram-negative prokaryote of the family Bartonellaceae.

Gram-negative rod-shaped microaerophile mesophilic genome sequence

Name and taxonomic classification

SI-ID 67570

CIP 103739,CCUG 45777

@ref 20215

Last LPSN update 2025-12-16 10:03:15

Domain Pseudomonadati

Phylum Pseudomonadota

Class Alphaproteobacteria

Order Hyphomicrobiales

Family Bartonellaceae

Genus Bartonella

Species Bartonella quintana

Full scientific name Bartonella quintana (Schmincke 1917) Brenner et al. 1993

Synonyms (2)

"Rickettsia quintana"
Rochalimaea quintana

BacDive ID	Other strains from **Bartonella quintana** (2)	Type strain
1633	B. quintana Fuller, DSM 21441, ATCC VR-358, CIP 107027 (type strain)
138444	B. quintana 10963/94, CIP 105257

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Confidence
125438			91.377
125438	negative		98.783
125439	negative		99.8
41147	negative	rod-shaped

Colony morphology

@ref	Incubation period
56919	3-5 days
41147

Culture and growth conditions

Culture medium

@ref	Name	Growth	Composition	Medium link
41147	MEDIUM 45 - for Columbia agar with sheep blood		Distilled water make up to (1000.000 ml);Columbia agar (39.000 g);Sheepblood (100.000 ml)
41147	CIP Medium 45			Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
41147	positive	growth	37	mesophilic
56919	positive	growth	37	mesophilic

Physiology and metabolism

Oxygen tolerance

56919

Oxygen tolerancemicroaerophile

Spore formation

@ref	Spore formation	Confidence
125438		92.88
125439		99.9

Halophily

@ref	Salt	Growth	Tested relation	Concentration
41147	NaCl	positive	growth	0 %
41147	NaCl		growth	2 %
41147	NaCl		growth	4 %
41147	NaCl		growth	6 %
41147	NaCl		growth	8 %
41147	NaCl		growth	10 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68371	27613 ChEBI	amygdalin	-	builds acid from	from API 50CH acid
68371	18305 ChEBI	arbutin	-	builds acid from	from API 50CH acid
68371	17057 ChEBI	cellobiose	-	builds acid from	from API 50CH acid
68371	17108 ChEBI	D-arabinose	-	builds acid from	from API 50CH acid
68371	18333 ChEBI	D-arabitol	-	builds acid from	from API 50CH acid
68371	15824 ChEBI	D-fructose	-	builds acid from	from API 50CH acid
68371	28847 ChEBI	D-fucose	-	builds acid from	from API 50CH acid
68371	12936 ChEBI	D-galactose	-	builds acid from	from API 50CH acid
68371	17634 ChEBI	D-glucose	-	builds acid from	from API 50CH acid
68371	62318 ChEBI	D-lyxose	-	builds acid from	from API 50CH acid
68371	16899 ChEBI	D-mannitol	-	builds acid from	from API 50CH acid
68371	16024 ChEBI	D-mannose	-	builds acid from	from API 50CH acid
68371	16988 ChEBI	D-ribose	-	builds acid from	from API 50CH acid
68371	17924 ChEBI	D-sorbitol	-	builds acid from	from API 50CH acid
68371	16443 ChEBI	D-tagatose	-	builds acid from	from API 50CH acid
68371	65327 ChEBI	D-xylose	-	builds acid from	from API 50CH acid
68371	17113 ChEBI	erythritol	-	builds acid from	from API 50CH acid
41147	4853 ChEBI	esculin	-	hydrolysis
68371	4853 ChEBI	esculin	-	builds acid from	from API 50CH acid
68371	16813 ChEBI	galactitol	-	builds acid from	from API 50CH acid
68371	28066 ChEBI	gentiobiose	-	builds acid from	from API 50CH acid
68371	24265 ChEBI	gluconate	-	builds acid from	from API 50CH acid
68371	17754 ChEBI	glycerol	-	builds acid from	from API 50CH acid
68371	28087 ChEBI	glycogen	-	builds acid from	from API 50CH acid
41147	606565 ChEBI	hippurate	-	hydrolysis
68371	15443 ChEBI	inulin	-	builds acid from	from API 50CH acid
68371	30849 ChEBI	L-arabinose	-	builds acid from	from API 50CH acid
68371	18403 ChEBI	L-arabitol	-	builds acid from	from API 50CH acid
68371	18287 ChEBI	L-fucose	-	builds acid from	from API 50CH acid
68371	62345 ChEBI	L-rhamnose	-	builds acid from	from API 50CH acid
68371	17266 ChEBI	L-sorbose	-	builds acid from	from API 50CH acid
68371	65328 ChEBI	L-xylose	-	builds acid from	from API 50CH acid
68371	17716 ChEBI	lactose	-	builds acid from	from API 50CH acid
68371	17306 ChEBI	maltose	-	builds acid from	from API 50CH acid
68371	6731 ChEBI	melezitose	-	builds acid from	from API 50CH acid
68371	28053 ChEBI	melibiose	-	builds acid from	from API 50CH acid
68371	320061 ChEBI	methyl alpha-D-glucopyranoside	-	builds acid from	from API 50CH acid
68371	43943 ChEBI	methyl alpha-D-mannoside	-	builds acid from	from API 50CH acid
68371	74863 ChEBI	methyl beta-D-xylopyranoside	-	builds acid from	from API 50CH acid
68371	17268 ChEBI	myo-inositol	-	builds acid from	from API 50CH acid
68371	59640 ChEBI	N-acetylglucosamine	-	builds acid from	from API 50CH acid
41147	17632 ChEBI	nitrate	-	reduction
41147	16301 ChEBI	nitrite	-	reduction
68371		Potassium 2-ketogluconate	-	builds acid from	from API 50CH acid
68371		Potassium 5-ketogluconate	-	builds acid from	from API 50CH acid
68371	16634 ChEBI	raffinose	-	builds acid from	from API 50CH acid
68371	15963 ChEBI	ribitol	-	builds acid from	from API 50CH acid
68371	17814 ChEBI	salicin	-	builds acid from	from API 50CH acid
68371	28017 ChEBI	starch	-	builds acid from	from API 50CH acid
68371	17992 ChEBI	sucrose	-	builds acid from	from API 50CH acid
68371	27082 ChEBI	trehalose	-	builds acid from	from API 50CH acid
68371	32528 ChEBI	turanose	-	builds acid from	from API 50CH acid
68371	17151 ChEBI	xylitol	-	builds acid from	from API 50CH acid

Metabolite production

@ref	Chebi-ID	Metabolite	Production
41147	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Methylred-test
41147	15688 ChEBI	acetoin	-
41147	17234 ChEBI	glucose		+

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	-	3.1.3.2	from API zym
41147	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	-	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68382	beta-galactosidase	-	3.2.1.23	from API zym
41147	beta-galactosidase	+	3.2.1.23
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
41147	catalase	-	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
41147	gamma-glutamyltransferase	-	2.3.2.2
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
41147	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	-		from API zym
41147	ornithine decarboxylase	-	4.1.1.17
41147	oxidase	+
41147	phenylalanine ammonia-lyase	-	4.3.1.24
68382	trypsin	+	3.4.21.4	from API zym
41147	tryptophan deaminase	-
41147	urease	-	3.5.1.5
68382	valine arylamidase	+		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
41147	-	-	+	+	-	+	+	-	+	-	-	-	-	-	-	+	-	-	-	-

API 50CHac

@ref	ControlQ	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
41147	not determinedn.d.	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Human	-
#Host Body Product	#Fluids	#Blood

Isolation

@ref	Sample type	Sampling date	Geographic location	Country	Country ISO 3 Code	Continent	Isolation date
41147			Toulouse	France	FRA	Europe
56919	Human blood	1993	Toulouse	France	FRA	Europe
41147	Human, Blood		Toulouse	France	FRA	Europe	1993

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
41147	2	Risk group (French classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	NCBI tax ID	Score
66792	Bartonella_quintana_CCUG45777 assembly for Bartonella quintana CCUG 45777	contig	GCA_902810555	803.7	803	71.79

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Bartonella quintana CCUG 45777
NCBI: GCA_902810555

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	99.90	no
125439	motility	BacteriaNetⓘ	yes	67.30	no
125439	gram_stain	BacteriaNetⓘ	negative	99.80	no
125439	oxygen_tolerance	BacteriaNetⓘ	facultative anaerobe	88.20	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Bartonella quintana strain CCUG 45777
PATRIC: 803.7

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	98.78	no
125438	anaerobic	anaerobicⓘ	no	87.59	yes
125438	aerobic	aerobicⓘ	no	84.64	yes
125438	spore-forming	spore-formingⓘ	no	92.88	no
125438	thermophilic	thermophileⓘ	no	93.33	yes
125438	flagellated	motile2+ⓘ	no	91.38	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Single high-fat challenge and trained innate immunity: A randomized controlled cross-over trial.	van Tuijl J, van Heck JIP, Bahrar H, Broeders W, Wijma J, Ten Have YM, Giera M, Zweers-van Essen H, Rodwell L, Joosten LAB, Netea MG, Afman LA, Bekkering S, Riksen NP.	iScience	10.1016/j.isci.2024.111103	2024
	Molecular epidemiology of Bartonella quintana endocarditis in patients from Israel and Eastern Africa.	Sato S, Shapira L, Tasher D, Maruyama S, Giladi M.	BMC Infect Dis	10.1186/s12879-023-08099-x	2023
	Laboratory Diagnosis of 37 Cases of Bartonella Endocarditis Based on Enzyme Immunoassay and Real-Time PCR.	Shapira L, Rasis M, Binsky Ehrenreich I, Maor Y, Katchman EA, Treves A, Velan A, Halutz O, Graidy-Varon M, Leibovitch C, Maisler N, Ephros M, Giladi M.	J Clin Microbiol	10.1128/jcm.02217-20	2021
Metabolism	Multi-locus sequence typing of a geographically and temporally diverse sample of the highly clonal human pathogen Bartonella quintana.	Arvand M, Raoult D, Feil EJ.	PLoS One	10.1371/journal.pone.0009765	2010
	Bartonella quintana lipopolysaccharide (LPS): structure and characteristics of a potent TLR4 antagonist for in-vitro and in-vivo applications.	Malgorzata-Miller G, Heinbockel L, Brandenburg K, van der Meer JW, Netea MG, Joosten LA.	Sci Rep	10.1038/srep34221	2016
Enzymology	Semiquantitative species-specific detection of Bartonella henselae and Bartonella quintana by PCR-enzyme immunoassay.	Sander A, Penno S.	J Clin Microbiol	10.1128/jcm.37.10.3097-3101.1999	1999
Phylogeny	Use of the cell division protein FtsZ as a means of differentiating among Bartonella species.	Kelly TM, Padmalayam I, Baumstark BR.	Clin Diagn Lab Immunol	10.1128/cdli.5.6.766-772.1998	1998

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#41147	Collection of Institut Pasteur ; Curators of the CIP; CIP 103739
#56919	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 45777
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#68371	Automatically annotated from API 50CH acid .
#68382	Automatically annotated from API zym .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us

Bartonella quintana (CIP 103739, CCUG 45777, Toulouse)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Metabolite utilization

Metabolite production

Metabolite tests

Enzymes

API zym

API 50CHac

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_902810555

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

Help

Social Media