Name: Bacteroides fragilis 10010
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 138258

Type strain:

Species: Bacteroides fragilis

Strain Designation: 10010

Culture col. no.: CIP 105891, ATCC 43858

Strain history: CIP <- 1999, J.P. Carlier, Inst. Pasteur, Paris, France: strain 10010 <- ATCC <- L.L. Myers

NCBI tax ID(s): 817 (species)

SI-ID 42086

ATCC 43858, CIP 105891

Special Collections

Other strains from Bacteroides fragilis

Section

Bacteroides fragilis 10010 is a Gram-negative, rod-shaped bacterium of the family Bacteroidaceae.

Gram-negative
rod-shaped
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Bacteroidia*
	Order	*Bacteroidales*
	Family	*Bacteroidaceae*
	Genus	*Bacteroides*
	Species	**Bacteroides fragilis**
	Full Scientific Name (LPSN)	Bacteroides fragilis (Veillon and Zuber 1898) Castellani and Chalmers 1919 (Approved Lists 1980)

Synonym

"Bacillus fragilis"

Information on morphological and physiological properties Morphology

[Ref.: #39380]	Gram stain	negative

[Ref.: #39380]	Cell shape	rod-shaped

[Ref.: #39380]	Motility	no

Information on culture and growth conditions Culture and growth conditions

[Ref.: #39380]

Culture medium

MEDIUM 6 - Columbia agar with 10 % horse blood

[Ref.: #39380]

Culture medium growth

[Ref.: #39380]

Culture medium composition

expand / minimize

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Culture medium

CIP Medium 6

[Ref.: #39380]

Culture medium growth

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Culture medium link

Medium recipe provided by DSMZ

[Ref.: #39380]

Culture medium

CIP Medium 6-Boites-Biorad

[Ref.: #39380]

Culture medium growth

[Ref.: #39380]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #39380]

Culture medium

CIP Medium 20

[Ref.: #39380]

Culture medium growth

[Ref.: #39380]

Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #39380]			growth	37 °C

Information on physiology and metabolism Physiology and metabolism

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #39380]	esculin ChEBI	+	hydrolysis
[Ref.: #39380]	nitrate ChEBI	-	reduction
[Ref.: #39380]	nitrate ChEBI	+	respiration
[Ref.: #39380]	nitrite ChEBI	-	reduction

	Metabolite production	Metabolite	Production
[Ref.: #39380]		indole ChEBI	no

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	+	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	+	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	+	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #39380]	amylase	-
[Ref.: #39380]	beta-galactosidase	+	3.2.1.23
[Ref.: #68382]	beta-galactosidase	+	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	+	3.2.1.31	* from API zym
[Ref.: #39380]	caseinase	+	3.4.21.50
[Ref.: #39380]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #39380]	gelatinase	-
[Ref.: #39380]	lecithinase	-
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #39380]	lipase	-
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	+	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #39380]	oxidase	-
[Ref.: #39380]	protease	-
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #39380]	tween esterase	-
[Ref.: #39380]	urease	-	3.5.1.5
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #39380]	9070	-	+	+	+	-	+	-	-	-	-	+	+	+	+	+	+	-	+	-	+

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #39380]	Sample type/isolated from	Human, Infant, diarrhea
[Ref.: #39380]	Geographic location (country and/or sea, region)	Arizona
[Ref.: #39380]	Country	United States of America
[Ref.: #39380]	Country ISO 3 Code	USA
[Ref.: #39380]	Continent	North America

[Ref.: #39380]	Geographic location (country and/or sea, region)	Arizona
[Ref.: #39380]	Country	USA
[Ref.: #39380]	Country ISO 3 Code	USA
[Ref.: #39380]	Continent	North America
* marker position based on {}

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #39380]

Biosafety level

Risk group (French classification)

Availability in culture collections External links

[Ref.: #39380]

Culture collection no.

CIP 105891, ATCC 43858

[Ref.: #95015]

SI-ID 42086

Literature:

Topic	Title	Authors	Journal	Year
Pathogenicity	Influence of clindamycin, metronidazole and polymyxin B on the expression of cell adhesion molecules stimulated by endotoxin and enterotoxin of Bacteroides fragilis.	Meisel-Mikolajczyk F, Rokosz A, Kot K, Zawidzka E, Malchar C, Nowaczyk M, Gorski A	Acta Microbiol Pol	2003	*
Metabolism	[Stimulation of adhesion molecule expression in human vascular endothelium by Bacteroides fragilis toxins--influence of polymyxin B].	Rokosz A, Meisel-Mikolajczyk F, Kot K, Malchar C, Zawidzka E, Nowaczyk M, Gorski A	Med Dosw Mikrobiol	2002	*
Pathogenicity	[The effect of metronidazole on stimulation of adhesion molecule expression on the surface of vascular endothelial cells by Bacteroides fragilis endotoxins and enterotoxin].	Meisel-Mikolajczyk F, Rokosz A, Kot K, Zawidzka E, Malchar C, Nowaczyk M, Gorski A	Med Dosw Mikrobiol	2001	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#39380 Collection of Institut Pasteur ; Curators of the CIP; CIP 105891

#68382

Automatically annotated from API zym .

#95015

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID42086.1 )

* These data were automatically processed and therefore are not curated

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