Name: Halobacillus locisalis MSS-155
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 1345

Type strain:

Species: Halobacillus locisalis

Strain Designation: MSS-155

Culture col. no.: DSM 16468, KCCM 41687, KCTC 3788

Strain history: <- JH Yoon, KRIBB

NCBI tax ID(s): 220753 (species)

SI-ID 134287

DSM 16468, KCTC 3788

Section

Halobacillus locisalis MSS-155 is an aerobe, spore-forming, mesophilic bacterium that was isolated from marine solar saltern.

motile
rod-shaped
spore-forming
aerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Bacillaceae*
	Genus	*Halobacillus*
	Species	**Halobacillus locisalis**
	Full Scientific Name (LPSN)	Halobacillus locisalis Yoon et al. 2004

Information on morphological and physiological properties Morphology

[Ref.: #67771]	Gram stain	variable
[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #67771]	Cell shape	rod-shaped

[Ref.: #67771]	Motility	yes
[Ref.: #69480]	Motility	yes Confidence in %95.56

[Ref.: #67771]	Flagellum arrangement	monotrichous, polar

Information on culture and growth conditions Culture and growth conditions

[Ref.: #6459]

Culture medium

BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)

[Ref.: #6459]

Culture medium growth

[Ref.: #6459]

Culture medium link

Medium recipe at MediaDive

[Ref.: #6459]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #6459]			growth	30 °C
[Ref.: #67771]			growth	35 °C

[Ref.: #6459]	Temperature range	mesophilic
[Ref.: #67771]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67771]

Oxygen tolerance

aerobe

[Ref.: #69481]	Ability of spore formation	yes Confidence in %100
[Ref.: #69480]	Ability of spore formation	yes Confidence in %99.681

[Ref.: #67771]

Observation

quinones: MK-7

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #6459]	Sample type/isolated from	marine solar saltern
[Ref.: #6459]	Geographic location (country and/or sea, region)	Baekryung Island
[Ref.: #6459]	Country	Republic of Korea
[Ref.: #6459]	Country ISO 3 Code	KOR
[Ref.: #6459]	Continent	Asia

[Ref.: #67771]	Sample type/isolated from	From a marine solar saltern of the Yellow Sea in Korea
[Ref.: #67771]	Country	Republic of Korea
[Ref.: #67771]	Country ISO 3 Code	KOR
[Ref.: #67771]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Marine
#Condition	#Saline	-
#Engineered	#Industrial	#Industrial production
#Environmental	#Terrestrial	#Coast

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #6459]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Halobacillus locisalis genes for 16S ribosomal RNA, internal transcribed spacer 1 and 23S ribosomal RNA, partial and complete sequence, clone: A485	AB367156	485	ENA	220753 tax ID	*
[Ref.: #20218]	Halobacillus locisalis genes for 16S ribosomal RNA, internal transcribed spacer 1 and 23S ribosomal RNA, partial and complete sequence, clone: 732	AB367157	732	ENA	220753 tax ID	*
[Ref.: #20218]	Halobacillus locisalis genes for 16S ribosomal RNA, internal transcribed spacer 1 and 23S ribosomal RNA, partial and complete sequence, clone: B485	AB367158	485	ENA	220753 tax ID	*
[Ref.: #20218]	Halobacillus locisalis 16S ribosomal RNA gene, partial sequence	AY190534	1522	ENA	220753 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Halobacillus locisalis KCTC 3788	GCA_013694105	scaffold	GenBank	220753 tax ID	*
[Ref.: #66792]	Halobacillus locisalis strain KCTC 3788	220753.4	wgs	PATRIC	220753 tax ID	*

[Ref.: #67771]

GC-content

44.0 mol%

high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Halobacillus locisalis KCTC 3788 NCBI: GCA_013694105.1
[Ref.: #69481]	spore-forming	yes	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Halobacillus locisalis KCTC 3788 NCBI: GCA_013694105.1
[Ref.: #69480]	motile	yes	92.803	yes
[Ref.: #69480]	flagellated	yes	86.262	yes
[Ref.: #69480]	gram-positive	yes	81.417	yes
[Ref.: #69480]	anaerobic	no	99.202	yes
[Ref.: #69480]	aerobic	yes	96.511	yes
[Ref.: #69480]	halophile	yes	92.322	no
[Ref.: #69480]	spore-forming	yes	91.883	no
[Ref.: #69480]	thermophile	no	98.208	no
[Ref.: #69480]	glucose-util	yes	89.486	no
[Ref.: #69480]	glucose-ferment	no	89.08	no

Availability in culture collections External links

[Ref.: #6459]

Culture collection no.

DSM 16468, KCCM 41687, KCTC 3788

[Ref.: #70995]

SI-ID 134287

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Halobacillus fulvus sp. nov., a moderately halophilic bacterium isolated from shrimp paste (Ka-pi) in Thailand.	Booncharoen A, Visessanguan W, Kuncharoen N, Yiamsombut S, Santiyanont P, Mhuantong W, Rojsitthisak P, Tanasupawat S	Int J Syst Evol Microbiol	10.1099/ijsem.0.005054	2021	*
Phylogeny	Halobacillus salicampi sp. nov., a moderately halophilic bacterium isolated from a solar saltern sediment.	Kim SJ, Lee JC, Han SI, Whang KS	Antonie Van Leeuwenhoek	10.1007/s10482-016-0672-y	2016	*
Phylogeny	Halobacillus locisalis sp. nov., a halophilic bacterium isolated from a marine solar saltern of the Yellow Sea in Korea.	Yoon JH, Kang KH, Oh TK, Park YH	Extremophiles	10.1007/s00792-003-0352-5	2003	*

References

#6459

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 16468

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#70995

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID134287.1 )

* These data were automatically processed and therefore are not curated

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Halobacillus locisalis KCTC 3788

Halobacillus locisalis KCTC 3788

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