Halobacillus locisalis (DSM 16468, KCCM 41687, KCTC 3788)

Name: Halobacillus locisalis (DSM 16468, KCCM 41687, KCTC 3788)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 1345

Type strain

Strain Designation MSS-155

Culture col. no. DSM 16468 KCCM 41687 KCTC 3788 MSS-155

NCBI tax ID(s) 220753

Special Collections DSMZ KCTC

Links

Halobacillus locisalis MSS-155 is an aerobe, mesophilic, motile prokaryote that was isolated from marine solar saltern.

motile rod-shaped aerobe mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 134287

DSM 16468,KCTC 3788

@ref 20215

Last LPSN update 2025-12-16 09:47:05

Domain Bacillati

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Bacillaceae

Genus Halobacillus

Species Halobacillus locisalis

Full scientific name Halobacillus locisalis Yoon et al. 2004

Morphology

Cell morphology

@ref	Cell shape	Motility	Flagellum arrangement
67771	rod-shaped		monotrichous, polar
67771

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
6459	BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)		Medium recipe at MediaDive	Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
6459	positive	growth	30	mesophilic
67771	positive	growth	35	mesophilic

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance
67771	aerobe
125439	obligate aerobe

Spore formation

@ref	Spore formation	Confidence
125439		90.5
125438		93.261

Observation

67771

Observationquinones: MK-7

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Marine
#Condition	#Saline	-
#Engineered	#Industrial	#Industrial production
#Environmental	#Terrestrial	#Coast

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
6459	marine solar saltern	Baekryung Island	Republic of Korea	KOR	Asia
67771	From a marine solar saltern of the Yellow Sea in Korea		Republic of Korea	KOR	Asia

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
6459	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM1369410v1 assembly for Halobacillus locisalis KCTC 3788	scaffold	GCA_013694105	220753.4	2995531702	220753	71.09

Genome browser: GCA_013694105

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20218	Halobacillus locisalis 16S ribosomal RNA gene, partial sequence	AY190534	1522		220753

GC content

@ref	GC-content (mol%)	Method
67771	44.0	high performance liquid chromatography (HPLC)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Halobacillus locisalis KCTC 3788
NCBI: GCA_013694105

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	yes	90.50	no
125439	motility	BacteriaNetⓘ	yes	84.60	no
125439	gram_stain	BacteriaNetⓘ	variable	79.60	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	95.60	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Halobacillus locisalis KCTC 3788
NCBI: GCA_013694105.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	75.85	yes
125438	anaerobic	anaerobicⓘ	no	91.71	no
125438	aerobic	aerobicⓘ	yes	81.36	yes
125438	spore-forming	spore-formingⓘ	yes	93.26	no
125438	thermophilic	thermophileⓘ	no	94.14	yes
125438	flagellated	motile2+ⓘ	yes	87.62	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Halobacillus fulvus sp. nov., a moderately halophilic bacterium isolated from shrimp paste (Ka-pi) in Thailand.	Booncharoen A, Visessanguan W, Kuncharoen N, Yiamsombut S, Santiyanont P, Mhuantong W, Rojsitthisak P, Tanasupawat S	Int J Syst Evol Microbiol	10.1099/ijsem.0.005054	2021
Phylogeny	Halobacillus salicampi sp. nov., a moderately halophilic bacterium isolated from a solar saltern sediment.	Kim SJ, Lee JC, Han SI, Whang KS	Antonie Van Leeuwenhoek	10.1007/s10482-016-0672-y	2016
Phylogeny	Halobacillus locisalis sp. nov., a halophilic bacterium isolated from a marine solar saltern of the Yellow Sea in Korea.	Yoon JH, Kang KH, Oh TK, Park YH	Extremophiles	10.1007/s00792-003-0352-5	2003

References

#6459	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 16468
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67771	Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Halobacillus locisalis (DSM 16468, KCCM 41687, KCTC 3788)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Observation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_013694105

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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