Name: Hydrogenophaga bisanensis K1 02
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 134293

Type strain:

Species: Hydrogenophaga bisanensis

Strain Designation: K1 02

Culture col. no.: KCTC 12980, CCUG 54518

Strain history: <- JH Yoon, KRIBB

NCBI tax ID(s): 439611 (species)

SI-ID 412050

CCUG 54518

Section

Hydrogenophaga bisanensis K1 02 is a facultative aerobe, Gram-negative, rod-shaped bacterium that was isolated from wastewater.

Gram-negative
rod-shaped
facultative aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Betaproteobacteria*
	Order	*Burkholderiales*
	Family	*Comamonadaceae*
	Genus	*Hydrogenophaga*
	Species	**Hydrogenophaga bisanensis**
	Full Scientific Name (LPSN)	Hydrogenophaga bisanensis Yoon et al. 2008

Information on morphological and physiological properties Morphology

[Ref.: #32293]	Gram stain	negative
[Ref.: #67771]	Gram stain	negative

[Ref.: #32293]	Cell length	3 µm

[Ref.: #32293]	Cell width	0.5 µm

[Ref.: #32293]	Cell shape	rod-shaped

[Ref.: #32293]

Pigment production

yes

Information on culture and growth conditions Culture and growth conditions

		Temperature
[Ref.: #32293]	growth	15-46 °C
[Ref.: #32293]	optimum	33.5 °C
[Ref.: #67771]	growth	37 °C

[Ref.: #32293]	Temperature range	mesophilic
[Ref.: #67771]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #32293]			optimum	7.5
[Ref.: #32293]			growth	6.5-9.5

Information on physiology and metabolism Physiology and metabolism

[Ref.: #32293]	Oxygen tolerance	facultative aerobe
[Ref.: #67771]	Oxygen tolerance	aerobe

[Ref.: #32293]

Ability of spore formation

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #32293]		NaCl		growth	0-1	%
[Ref.: #32293]		NaCl		optimum	0.5	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #32293]	adipate ChEBI	+	carbon source
[Ref.: #32293]	gluconate ChEBI	+	carbon source
[Ref.: #32293]	glucose ChEBI	+	carbon source
[Ref.: #32293]	glycerol ChEBI	+	carbon source

	Enzymes	Enzyme	Enzyme activity	EC number
[Ref.: #32293]		catalase	+	1.11.1.6

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #32293]	Sample type/isolated from	wastewater

[Ref.: #60208]	Sample type/isolated from	Wastewater of a dyeworks
[Ref.: #60208]	Sampling date	2004-04-01
[Ref.: #60208]	Geographic location (country and/or sea, region)	Daegu,Bisan
[Ref.: #60208]	Country	Republic of Korea
[Ref.: #60208]	Country ISO 3 Code	KOR
[Ref.: #60208]	Continent	Asia

[Ref.: #67771]	Sample type/isolated from	From wastewater
[Ref.: #67771]	Geographic location (country and/or sea, region)	Daegu
[Ref.: #67771]	Country	Republic of Korea
[Ref.: #67771]	Country ISO 3 Code	KOR
[Ref.: #67771]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Engineered

#Waste

#Wastewater

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #32293]	Hydrogenophaga bisanensis strain K102 16S ribosomal RNA gene, partial sequence	EF532793	1484	GenBank	439611 tax ID

[Ref.: #32293]

GC-content

64.8 mol%

Availability in culture collections External links

[Ref.: #32293]

Culture collection no.

KCTC 12980, CCUG 54518

[Ref.: #91875]

SI-ID 412050

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Hydrogenophaga luteola sp. nov. isolated from reed pond water.	Du J, Yang JE, Singh H, Akter S, Won K, Yin CS, Jin FX, Yi TH	Antonie Van Leeuwenhoek	10.1007/s10482-015-0525-0	2015	*
Phylogeny	Hydrogenophaga bisanensis sp. nov., isolated from wastewater of a textile dye works.	Yoon JH, Kang SJ, Ryu SH, Jeon CO, Oh TK	Int J Syst Evol Microbiol	10.1099/ijs.0.65271-0	2008	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#32293

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #28533 (see below)

#60208 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 54518
#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;

#91875

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID412050.1 )

#28533

IJSEM 393 2008 ( DOI 10.1099/ijs.0.65271-0 , PubMed 18218937 )

* These data were automatically processed and therefore are not curated

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