Name: Paracoccus haeundaensis LMGP-21903
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 134094

Type strain:

Species: Paracoccus haeundaensis

Strain Designation: LMGP-21903

Culture col. no.: KCCM 10460, BC 74171

NCBI tax ID(s): 225362 (species)

Section

Paracoccus haeundaensis LMGP-21903 is an aerobe, Gram-negative, rod-shaped bacterium that was isolated from seawater.

Gram-negative
rod-shaped
aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Rhodobacterales*
	Family	*Paracoccaceae*
	Genus	*Paracoccus*
	Species	**Paracoccus haeundaensis**
	Full Scientific Name (LPSN)	Paracoccus haeundaensis Lee et al. 2004

Information on morphological and physiological properties Morphology

[Ref.: #31256]	Gram stain	negative

[Ref.: #31256]	Cell length	1.65 µm

[Ref.: #31256]	Cell width	0.5 µm

[Ref.: #31256]	Cell shape	rod-shaped

[Ref.: #31256]	Motility	no

[Ref.: #31256]

Pigment production

yes

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #31256]			growth	20-37 °C
[Ref.: #31256]			optimum	25 °C

[Ref.: #31256]

Temperature range

mesophilic

	pH	Kind of pH		pH
[Ref.: #31256]			optimum	8
[Ref.: #31256]			growth	6-10.5

Information on physiology and metabolism Physiology and metabolism

[Ref.: #31256]

Oxygen tolerance

aerobe

[Ref.: #31256]

Ability of spore formation

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #31256]		NaCl		growth	<8	%
[Ref.: #31256]		NaCl		optimum	3.5	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #31256]	arabinose ChEBI	+	carbon source
[Ref.: #31256]	citrate ChEBI	+	carbon source
[Ref.: #31256]	galactose ChEBI	+	carbon source
[Ref.: #31256]	nitrate ChEBI	+	reduction

	Enzymes	Enzyme	Enzyme activity	EC number
[Ref.: #31256]		catalase	+	1.11.1.6
[Ref.: #31256]		cytochrome oxidase	+	1.9.3.1

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #31256]	Sample type/isolated from	seawater
* marker position based on {}

Isolation sources categories

#Environmental

#Aquatic

#Marine

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AY189743 (>99% sequence identity) for Paracoccus from Microbeatlas

Aquatic Samples	3236
Soil Samples	923
Animal Samples	6383
Plant Samples	456
Total Samples	10998

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #31256]	Paracoccus haeundaesis strain BC74171 16S ribosomal RNA gene, complete sequence	AY189743	1408	GenBank	225362 tax ID

[Ref.: #31256]

GC-content

66.9 mol%

Availability in culture collections External links

[Ref.: #31256]

Culture collection no.

KCCM 10460, BC 74171

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Paracoccus hibiscisoli sp. nov., isolated from the rhizosphere of Mugunghwa (Hibiscus syriacus).	Lin P, Yan ZF, Won KH, Yang JE, Li CT, Kook M, Wang QJ, Yi TH	Int J Syst Evol Microbiol	10.1099/ijsem.0.001990	2017	*
Phylogeny	Paracoccus aestuarii sp. nov., isolated from tidal flat sediment.	Roh SW, Nam YD, Chang HW, Kim KH, Kim MS, Shin KS, Yoon JH, Oh HM, Bae JW	Int J Syst Evol Microbiol	10.1099/ijs.0.65759-0	2009	*
Pathogenicity	Extracellular synthesis of gold nanoparticles using the marine bacterium Paracoccus haeundaensis BC74171(T) and evaluation of their antioxidant activity and antiproliferative effect on normal and cancer cell lines.	Patil MP, Kang MJ, Niyonizigiye I, Singh A, Kim JO, Seo YB, Kim GD	Colloids Surf B Biointerfaces	10.1016/j.colsurfb.2019.110455	2019	*
Phylogeny	Paracoccus haeundaensis sp. nov., a Gram-negative, halophilic, astaxanthin-producing bacterium.	Lee JH, Kim YS, Choi TJ, Lee WJ, Kim YT	Int J Syst Evol Microbiol	10.1099/ijs.0.63146-0	2004	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#31256

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #27579 (see below)

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#27579

IJSEM 1699 2004 ( DOI 10.1099/ijs.0.63146-0 , PubMed 15388731 )

* These data were automatically processed and therefore are not curated

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