Gracilimonas rosea (KCCM 90206, JCM 18898, CL-KR2)

Name: Gracilimonas rosea (KCCM 90206, JCM 18898, CL-KR2)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 134035

Type strain

Strain Designation CL-KR2

Culture col. no. KCCM 90206 JCM 18898 CL-KR2

NCBI tax ID(s) 1309792

Special Collections JCM Literature strains

History B. C. Cho CL-KR2.

Links

Gracilimonas rosea CL-KR2 is an aerobe, spore-forming, Gram-negative bacterium that was isolated from seawater.

spore-forming Gram-negative rod-shaped aerobe 16S sequence Bacteria

Name and taxonomic classification

SI-ID 133619

JCM 18898

@ref 20215

Last LPSN update 2026-02-09 11:32:05

Domain Bacteria

Phylum Balneolota

Class Balneolia

Order Balneolales

Family Balneolaceae

Genus Gracilimonas

Species Gracilimonas rosea

Full scientific name Gracilimonas rosea Cho et al. 2013

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Motility
31109	negative	2.7 µm	0.3 µm	rod-shaped

Pigmentation

31109

Productionyes

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
31109	positive	growth	15-40
31109	positive	optimum	35
67770	positive	growth	35

Culture pH

@ref	Ability	Type	PH	PH range
31109	positive	optimum	7.5
31109	positive	growth	6.5-9.0	alkaliphile

Physiology and metabolism

Oxygen tolerance

31109

Oxygen toleranceaerobe

Spore formation

31109

Spore formationyes

Halophily

@ref	Salt	Growth	Tested relation	Concentration
31109	NaCl	positive	growth	01-20 %
31109	NaCl	positive	optimum	4.25 %

Observation

31109

Observationaggregates in clumps

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
31109	22599 ChEBI	arabinose	+	carbon source
31109	35391 ChEBI	aspartate	+	carbon source
31109	4853 ChEBI	esculin	+	hydrolysis
31109	28757 ChEBI	fructose	+	carbon source
31109	17234 ChEBI	glucose	+	carbon source
31109	17754 ChEBI	glycerol	+	carbon source
31109	29864 ChEBI	mannitol	+	carbon source
31109	37684 ChEBI	mannose	+	carbon source
31109	506227 ChEBI	N-acetylglucosamine	+	carbon source
31109	26271 ChEBI	proline	+	carbon source
31109	15361 ChEBI	pyruvate	+	carbon source
31109	16634 ChEBI	raffinose	+	carbon source
31109	17992 ChEBI	sucrose	+	carbon source
31109	27082 ChEBI	trehalose	+	carbon source

Enzymes

@ref	Value	Activity	Ec
31109	acid phosphatase	+	3.1.3.2
31109	alkaline phosphatase	+	3.1.3.1
31109	catalase	+	1.11.1.6
31109	cytochrome oxidase	+	1.9.3.1
31109	gelatinase	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Marine

Isolation

@ref	Sample type
31109	seawater
67770	Tropical seawater near Kosrae, an island in the Federated States of Micronesia

Taxonmaps

69479

Global distribution of 16S sequence KC686334 (>99% sequence identity) for Gracilimonas rosea subclade from Microbeatlas

Aquatic Samples	216
Soil Samples	21
Animal Samples	4
Plant Samples	2
Total Samples	243

Interaction and safety

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
31109	Gracilimonas rosea strain CL-KR2 16S ribosomal RNA gene, partial sequence	KC686334	1458		1309792

GC content

@ref	GC-content (mol%)	Method
31109	43.2
67770	43.2	high performance liquid chromatography (HPLC)

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Gracilimonas sediminicola sp. nov., a moderately halotolerant bacterium isolated from seaweed sediment collected in the East Sea, Republic of Korea.	Lee Y, Weerawongwiwat V, Kim JH, Yoon JH, Lee JS, Sukhoom A, Kim W.	Int J Syst Evol Microbiol	10.1099/ijsem.0.005912	2023
Phylogeny	Gracilimonas amylolytica sp. nov., isolated from deep-sea sediment.	Wu YH, Yan J, Fang C, Huo YY, Ma WL, Zhang DM, Wang CS, Xu XW	Int J Syst Evol Microbiol	10.1099/ijsem.0.002734	2018
Phylogeny	Gracilimonas halophila sp. nov., isolated from a marine solar saltern.	Lu DC, Xia J, Dunlap CA, Rooney AP, Du ZJ	Int J Syst Evol Microbiol	10.1099/ijsem.0.002093	2017
Phylogeny	Rhodohalobacter halophilus gen. nov., sp. nov., a moderately halophilic member of the family Balneolaceae.	Xia J, Xie ZH, Dunlap CA, Rooney AP, Du ZJ	Int J Syst Evol Microbiol	10.1099/ijsem.0.001806	2017
Phylogeny	Soortia roseihalophila gen. nov., sp. nov., a new taxon in the order Balneolales isolated from a travertine spring, and description of Soortiaceae fam. nov.	Amoozegar MA, Khansha J, Mehrshad M, Shahzadeh Fazeli SA, Ramezani M, de la Haba RR, Sanchez-Porro C, Ventosa A	Int J Syst Evol Microbiol	10.1099/ijsem.0.001583	2017
Phylogeny	Gracilimonas rosea sp. nov., isolated from tropical seawater, and emended description of the genus Gracilimonas.	Cho Y, Chung H, Jang GI, Choi DH, Noh JH, Cho BC	Int J Syst Evol Microbiol	10.1099/ijs.0.052340-0	2013

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#27438	IJSEM 4006 2013 ( DOI 10.1099/ijs.0.052340-0 , PubMed 23710056 )
#31109	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #27438
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Gracilimonas rosea (KCCM 90206, JCM 18898, CL-KR2)

Name and taxonomic classification

Morphology

Cell morphology

Pigmentation

Culture and growth conditions

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Observation

Metabolite utilization

Enzymes

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Sequence information

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

BacDive

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