Name: Muricauda taeanensis 105
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 133943

Type strain:

Species: Muricauda taeanensis

Strain Designation: 105

Culture col. no.: KACC 16195, JCM 17757

Strain history: C. O. Jeon 105.

NCBI tax ID(s): 1005926 (species)

Section

Muricauda taeanensis 105 is an aerobe, Gram-negative, motile bacterium that was isolated from marine tidal flat.

Gram-negative
motile
rod-shaped
aerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Flavobacteriia*
	Order	*Flavobacteriales*
	Family	*Flavobacteriaceae*
	Genus	Muricauda
	Species	Muricauda taeanensis
	Full Scientific Name (LPSN)	Muricauda taeanensis Kim et al. 2013

	Synonym	Allomuricauda antarctica
	Synonym	Allomuricauda taeanensis
	Synonym	Muricauda antarctica

Information on morphological and physiological properties Morphology

[Ref.: #30923]	Gram stain	negative
[Ref.: #69480]	Gram stain	negative Confidence in %99.982

[Ref.: #30923]	Cell length	5.25 µm

[Ref.: #30923]	Cell width	0.3 µm

[Ref.: #30923]	Cell shape	rod-shaped

[Ref.: #30923]	Motility	yes

[Ref.: #30923]	Flagellum arrangement	gliding

[Ref.: #30923]

Pigment production

yes

Information on culture and growth conditions Culture and growth conditions

		Temperature
[Ref.: #30923]	growth	15-40 °C
[Ref.: #30923]	optimum	33.5 °C
[Ref.: #67770]	growth	30 °C

[Ref.: #30923]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #30923]			optimum	7.25
[Ref.: #30923]			growth	5.5-9.0

Information on physiology and metabolism Physiology and metabolism

[Ref.: #30923]

Oxygen tolerance

aerobe

[Ref.: #30923]	Ability of spore formation	no
[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.999

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #30923]		NaCl		growth	1.0-8.0	%
[Ref.: #30923]		NaCl		optimum	3	%

[Ref.: #30923]	Observation	aggregates in clumps
[Ref.: #67770]	Observation	quinones: MK-6

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #30923]	fructose ChEBI	+	carbon source
[Ref.: #30923]	galactose ChEBI	+	carbon source
[Ref.: #30923]	glucose ChEBI	+	carbon source
[Ref.: #30923]	lactose ChEBI	+	carbon source
[Ref.: #30923]	maltose ChEBI	+	carbon source
[Ref.: #30923]	mannose ChEBI	+	carbon source
[Ref.: #30923]	melibiose ChEBI	+	carbon source
[Ref.: #30923]	raffinose ChEBI	+	carbon source
[Ref.: #30923]	sucrose ChEBI	+	carbon source
[Ref.: #30923]	trehalose ChEBI	+	carbon source

	Enzyme	Enzyme activity	EC number
[Ref.: #30923]	acid phosphatase	+	3.1.3.2
[Ref.: #30923]	alkaline phosphatase	+	3.1.3.1
[Ref.: #30923]	catalase	+	1.11.1.6
[Ref.: #30923]	cytochrome oxidase	+	1.9.3.1
[Ref.: #30923]	gelatinase	+

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #30923]	Sample type/isolated from	marine tidal flat

[Ref.: #67770]	Sample type/isolated from	Surface tidal flat sediment of the Taean coast of Yellow Sea
[Ref.: #67770]	Country	Republic of Korea
[Ref.: #67770]	Country ISO 3 Code	KOR
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Marine
#Environmental	#Terrestrial	#Tidal flat

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence JF714702 (>99% sequence identity) for Muricauda from Microbeatlas

Aquatic Samples	380
Soil Samples	95
Animal Samples	8
Plant Samples	1
Total Samples	484

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #30923]	Muricauda taeanensis strain 105 16S ribosomal RNA gene, partial sequence	JF714702	1439	GenBank	1005926 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Allomuricauda taeanensis JCM 17757	GCA_003584105	scaffold	GenBank	1005926 tax ID
[Ref.: #66792]	Muricauda taeanensis strain JCM 17757	1005926.4	wgs	PATRIC	1005926 tax ID	*
[Ref.: #66792]	Muricauda taeanensis JCM 17757	2835303341	draft	JGI IMG/M	1005926 tax ID	*

[Ref.: #30923]	GC-content	42.4 mol%
[Ref.: #67770]	GC-content	42.4 mol%	thermal denaturation, midpoint method (Tm)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Muricauda taeanensis JCM 17757 NCBI: GCA_003584105.1
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Muricauda taeanensis strain JCM 17757 PATRIC: 1005926.4
[Ref.: #69480]	motile	no	90.495	no
[Ref.: #69480]	flagellated	no	96.529	no
[Ref.: #69480]	gram-positive	no	98.433	yes
[Ref.: #69480]	anaerobic	no	99.476	yes
[Ref.: #69480]	aerobic	yes	88.17	no
[Ref.: #69480]	halophile	no	82.061	no
[Ref.: #69480]	spore-forming	no	97.716	yes
[Ref.: #69480]	thermophile	no	98.492	yes
[Ref.: #69480]	glucose-util	yes	87.03	no
[Ref.: #69480]	glucose-ferment	no	88.808	no

Availability in culture collections External links

[Ref.: #30923]

Culture collection no.

KACC 16195, JCM 17757

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Muricauda taeanensis sp. nov., isolated from a marine tidal flat.	Kim JM, Jin HM, Jeon CO	Int J Syst Evol Microbiol	10.1099/ijs.0.047647-0	2013	*
Phylogeny	Muricauda hadalis sp. nov., a novel piezophile isolated from hadopelagic water of the Mariana Trench and reclassification of Muricauda antarctica as a later heterotypic synonym of Muricauda teanensis.	Zhang Y, Gao Y, Pei J, Cao J, Xie Z, Liu R, Wang L, Wei Y, Fang J	Int J Syst Evol Microbiol	10.1099/ijsem.0.004288	2020	*
Phylogeny	Muricauda maritima sp. nov., Muricauda aequoris sp. nov. and Muricauda oceanensis sp. nov., three marine bacteria isolated from seawater.	Guo LL, Wu D, Sun C, Cheng H, Xu XW, Wu M, Wu YH	Int J Syst Evol Microbiol	10.1099/ijsem.0.004522	2020	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#30923

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #27253 (see below)

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#27253

IJSEM 2672 2013 ( DOI 10.1099/ijs.0.047647-0 , PubMed 23291883 )

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Muricauda taeanensis in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF

Muricauda taeanensis JCM 17757

Muricauda taeanensis strain JCM 17757

Change proposal

Change proposal