Name: Oceanicaulis stylophorae GISW-4
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 133775

Type strain:

Species: Oceanicaulis stylophorae

Strain Designation: GISW-4

Culture col. no.: LMG 25723, BCRC 80207

NCBI tax ID(s): 763065 (species)

Section

Oceanicaulis stylophorae GISW-4 is an aerobe, Gram-negative, motile bacterium that was isolated from Coral.

Gram-negative
motile
rod-shaped
aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Caulobacterales*
	Family	*Maricaulaceae*
	Genus	*Oceanicaulis*
	Species	**Oceanicaulis stylophorae**
	Full Scientific Name (LPSN)	Oceanicaulis stylophorae Chen et al. 2012

Information on morphological and physiological properties Morphology

[Ref.: #30468]	Gram stain	negative

[Ref.: #30468]	Cell length	1.1 µm

[Ref.: #30468]	Cell width	0.65 µm

[Ref.: #30468]	Cell shape	rod-shaped

[Ref.: #30468]	Motility	yes

[Ref.: #30468]

Pigment production

yes

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #30468]			growth	15-45 °C
[Ref.: #30468]			optimum	37.5 °C

[Ref.: #30468]

Temperature range

mesophilic

	pH	Kind of pH		pH
[Ref.: #30468]			optimum	8
[Ref.: #30468]			growth	06-10

Information on physiology and metabolism Physiology and metabolism

[Ref.: #30468]

Oxygen tolerance

aerobe

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #30468]		NaCl		growth	0-9	%
[Ref.: #30468]		NaCl		optimum	1.50	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #30468]	2-oxopentanoate ChEBI	+	carbon source
[Ref.: #30468]	alanine ChEBI	+	carbon source
[Ref.: #30468]	arabinose ChEBI	+	carbon source
[Ref.: #30468]	arginine ChEBI	+	carbon source
[Ref.: #30468]	citrate ChEBI	+	carbon source
[Ref.: #30468]	fructose ChEBI	+	carbon source
[Ref.: #30468]	fucose ChEBI	+	carbon source
[Ref.: #30468]	galactose ChEBI	+	carbon source
[Ref.: #30468]	glutamate ChEBI	+	carbon source
[Ref.: #30468]	glycine ChEBI	+	carbon source
[Ref.: #30468]	L-alaninamide ChEBI	+	carbon source
[Ref.: #30468]	lactate ChEBI	+	carbon source
[Ref.: #30468]	mannitol ChEBI	+	carbon source
[Ref.: #30468]	methyl pyruvate ChEBI	+	carbon source
[Ref.: #30468]	phenylalanine ChEBI	+	carbon source
[Ref.: #30468]	proline ChEBI	+	carbon source
[Ref.: #30468]	urea ChEBI	+	carbon source
	Only first 10 entries are displayed. Click here to see all.

	Enzyme	Enzyme activity	EC number
[Ref.: #30468]	catalase	+	1.11.1.6
[Ref.: #30468]	cytochrome oxidase	+	1.9.3.1
[Ref.: #30468]	gelatinase	+

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #30468]	Sample type/isolated from	Coral
* marker position based on {}

Isolation sources categories

#Host

#Invertebrates (Other)

#Cnidaria (Corals)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence HM035090 (>99% sequence identity) for Oceanicaulis from Microbeatlas

Aquatic Samples	3139
Soil Samples	111
Animal Samples	127
Plant Samples	15
Total Samples	3392

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #30468]	Oceanicaulis stylophorae strain GISW-4 16S ribosomal RNA gene, partial sequence	HM035090	1401	GenBank	763065 tax ID

[Ref.: #30468]

GC-content

61.6 mol%

Availability in culture collections External links

[Ref.: #30468]

Culture collection no.

LMG 25723, BCRC 80207

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Oceanicaulis stylophorae sp. nov., isolated from the reef-building coral Stylophora pistillata.	Chen MH, Sheu SY, Chen CA, Wang JT, Chen WM	Int J Syst Evol Microbiol	10.1099/ijs.0.036780-0	2011	*
Phylogeny	Alkalicaulis satelles gen. nov., sp. nov., a novel haloalkaliphile isolated from a laboratory culture cyanobacterium Geitlerinema species and proposals of Maricaulaceae fam. nov., Robiginitomaculaceae fam. nov., Maricaulales ord. nov. and Hyphomonadales ord. nov.	Kevbrin V, Boltyanskaya Y, Koziaeva V, Uzun M, Grouzdev D	Int J Syst Evol Microbiol	10.1099/ijsem.0.004614	2020	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#30468

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #26803 (see below)

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#26803

IJSEM 2241 2012 ( DOI 10.1099/ijs.0.036780-0 , PubMed 22081721 )

* These data were automatically processed and therefore are not curated

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