Name: Streptomyces fuscichromogenes m16
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 133306

Type strain:

Species: Streptomyces fuscichromogenes

Strain Designation: m16

Culture col. no.: CGMCC 4.7110, KCTC 29195

Strain history: <- Jian-Li Zhang ,Yunnan, China

NCBI tax ID(s): 1324013 (species)

Section

Streptomyces fuscichromogenes m16 is an aerobe, spore-forming, Gram-positive bacterium that has a brown pigmentation and was isolated from soil sample.

Gram-positive
pigmented
spore-forming
aerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Kitasatosporales*
	Family	*Streptomycetaceae*
	Genus	*Streptomyces*
	Species	**Streptomyces fuscichromogenes**
	Full Scientific Name (LPSN)	Streptomyces fuscichromogenes Zhang et al. 2017

Information on morphological and physiological properties Morphology

[Ref.: #67771]	Gram stain	positive
[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #69480]	Motility	no Confidence in %91.41

[Ref.: #25163]	Colony color	brown
[Ref.: #25163]	Cultivation medium used	ISP2

[Ref.: #25163]	Pigment production	yes
[Ref.: #25163]	Pigmentation color	brown
[Ref.: #25163]	Pigment name	Melanin pigments

Information on culture and growth conditions Culture and growth conditions

[Ref.: #25163]

Culture medium

ISP 2

[Ref.: #25163]

Culture medium growth

		Temperature
[Ref.: #25163]	growth	15-35 °C
[Ref.: #25163]	optimum	28 °C
[Ref.: #67771]	growth	28-30 °C

[Ref.: #25163]	Temperature range	mesophilic
[Ref.: #67771]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #25163]			growth	5.0-11.0

Information on physiology and metabolism Physiology and metabolism

[Ref.: #25163]	Oxygen tolerance	aerobe
[Ref.: #67771]	Oxygen tolerance	aerobe

[Ref.: #25163]	Spore description	spiral spore chains
[Ref.: #25163]	Type of spore	spore
[Ref.: #25163]	Ability of spore formation	yes
[Ref.: #25163]	Spore description	elliptical and the surface is smooth
[Ref.: #25163]	Ability of spore formation	no
[Ref.: #69481]	Ability of spore formation	yes Confidence in %100
[Ref.: #69480]	Ability of spore formation	yes Confidence in %100

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #25163]		NaCl		growth	0-3	%(w/v)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #25163]	cellulose ChEBI	-	hydrolysis
[Ref.: #25163]	D-arabinose ChEBI	+	carbon source
[Ref.: #25163]	D-glucose ChEBI	+	carbon source
[Ref.: #25163]	D-mannitol ChEBI	+	carbon source
[Ref.: #25163]	D-xylose ChEBI	+	carbon source
[Ref.: #25163]	esculin ChEBI	+	hydrolysis
[Ref.: #25163]	fructose ChEBI	+	carbon source
[Ref.: #25163]	gelatin ChEBI	+	hydrolysis
[Ref.: #25163]	glycine ChEBI	+	nitrogen source
[Ref.: #25163]	L-arginine ChEBI	-	nitrogen source
[Ref.: #25163]	L-asparagine ChEBI	+	nitrogen source
[Ref.: #25163]	L-phenylalanine ChEBI	+	nitrogen source
[Ref.: #25163]	L-rhamnose ChEBI	+	carbon source
[Ref.: #25163]	L-tryptophan ChEBI	-	nitrogen source
[Ref.: #25163]	nitrate ChEBI	-	reduction
[Ref.: #25163]	raffinose ChEBI	+	carbon source
[Ref.: #25163]	sodium citrate ChEBI	+	carbon source
[Ref.: #25163]	starch ChEBI	-	hydrolysis
[Ref.: #25163]	sucrose ChEBI	+	carbon source
[Ref.: #25163]	tween 20 ChEBI	+	hydrolysis
[Ref.: #25163]	tween 80 ChEBI	-	hydrolysis
[Ref.: #25163]	urea ChEBI	+	hydrolysis
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #25163]		acetoin ChEBI	yes
[Ref.: #25163]		hydrogen sulfide ChEBI	no

	Physiological tests	Metabolite	Voges-Proskauer-test
[Ref.: #25163]		acetoin ChEBI	+

	Enzymes	Enzyme	Enzyme activity	EC number
[Ref.: #25163]		catalase	+	1.11.1.6
[Ref.: #25163]		cytochrome oxidase	-	1.9.3.1

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #25163]

Fatty acid	Percentage
C16:0 iso	29.3
C15:0 iso	15.4
C15:0 anteiso	14.6

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #25163]	Sample type/isolated from	soil sample
[Ref.: #25163]	Geographic location (country and/or sea, region)	Xishuangbanna’s tropical rain forest, Yunnan Province, south-west China
[Ref.: #25163]	Country	China
[Ref.: #25163]	Country ISO 3 Code	CHN
[Ref.: #25163]	Continent	Asia

[Ref.: #67771]	Sample type/isolated from	From soil sample collected from Xishuangbanna's tropical rain forest
[Ref.: #67771]	Geographic location (country and/or sea, region)	a prefecture in Yunnan Province
[Ref.: #67771]	Country	China
[Ref.: #67771]	Country ISO 3 Code	CHN
[Ref.: #67771]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #25163]	16S rRNA gene sequence	KC771428	1430	ENA	1324013 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Streptomyces fuscichromogenes CGMCC 4.7110	GCA_014645815	scaffold	GenBank	1324013 tax ID	*
[Ref.: #66792]	Streptomyces fuscichromogenes strain CGMCC 4.7110	1324013.3	wgs	PATRIC	1324013 tax ID	*

[Ref.: #25163]

GC-content

70 mol%

thermal denaturation, midpoint method (Tm)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Streptomyces fuscichromogenes CGMCC 4.7110 NCBI: GCA_014645815.1
[Ref.: #69481]	spore-forming	yes	100	no
[Ref.: #69481]	spore-forming	yes	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Streptomyces fuscichromogenes CGMCC 4.7110 NCBI: GCA_014645815.1
[Ref.: #69480]	flagellated	no	98.356	no
[Ref.: #69480]	gram-positive	yes	87.494	yes
[Ref.: #69480]	anaerobic	no	99.296	yes
[Ref.: #69480]	aerobic	yes	93.421	yes
[Ref.: #69480]	halophile	no	94.118	no
[Ref.: #69480]	spore-forming	yes	93.21	no
[Ref.: #69480]	glucose-util	yes	87.881	yes
[Ref.: #69480]	thermophile	no	99.288	yes
[Ref.: #69480]	motile	no	95.194	no
[Ref.: #69480]	glucose-ferment	no	89.892	no

Availability in culture collections External links

[Ref.: #25163]

Culture collection no.

CGMCC 4.7110, KCTC 29195

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Streptomyces fuscichromogenes sp. nov., an actinomycete from soil.	Zhang H, Zheng J, Zhuang J, Xin Y, Zheng X, Zhang J	Int J Syst Evol Microbiol	10.1099/ijsem.0.001573	2017	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#25163

H. Z. Zhang, J.,Zhuang, J.,Xin, Y.,Zheng, X.,Zhang, J.: Streptomyces fuscichromogenes sp. nov., an actinomycete from soil. IJSEM 67: 77 - 81 2017 ( DOI 10.1099/ijsem.0.001573 , PubMed 27902221 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

* These data were automatically processed and therefore are not curated

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Streptomyces fuscichromogenes CGMCC 4.7110

Streptomyces fuscichromogenes CGMCC 4.7110

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