Streptomyces fuscichromogenes (CGMCC 4.7110, KCTC 29195, m16)

Name: Streptomyces fuscichromogenes (CGMCC 4.7110, KCTC 29195, m16)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 133306

Type strain

Strain Designation m16

Culture col. no. CGMCC 4.7110 KCTC 29195 m16

NCBI tax ID(s) 1324013

Special Collections KCTC Literature strains

History <- Jian-Li Zhang ,Yunnan, China

Links

Streptomyces fuscichromogenes m16 is an aerobe, spore-forming, Gram-positive prokaryote that has a brown pigmentation and was isolated from soil sample.

spore-forming Gram-positive pigmented aerobe genome sequence 16S sequence

Name and taxonomic classification

SI-ID 285861

KCTC 29195

@ref 20215

Last LPSN update 2026-02-09 11:31:55

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Kitasatosporales

Family Streptomycetaceae

Genus Streptomyces

Species Streptomyces fuscichromogenes

Full scientific name Streptomyces fuscichromogenes Zhang et al. 2017

Morphology

Cell morphology

@ref	Gram stain	Confidence
67771	positive
125439	positive	99.8
125439		91.9

Colony morphology

@ref	Colony color	Medium used
25163	brown	ISP2

Pigmentation

@ref	Production	Color	Name
25163		brown	melanin pigment

Culture and growth conditions

Culture medium

@ref	Name	Growth
25163	ISP 2

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
25163	positive	growth	15-35
25163	positive	optimum	28	mesophilic
67771	positive	growth	28-30	mesophilic

Culture pH

@ref	Ability	Type	PH	PH range
25163	positive	growth	5.0-11.0	alkaliphile

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
25163	aerobe
67771	aerobe
125438	aerobe	93.172
125439	obligate aerobe	98.5

Spore formation

@ref	Spore description	Type of spore	Confidence
25163	spiral spore chains	spore
25163	elliptical and the surface is smooth
125438			92.031

Halophily

@ref	Salt	Growth	Tested relation	Concentration
25163	NaCl	positive	growth	0-3 %(w/v)

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
25163	62968 ChEBI	cellulose	-	hydrolysis
25163	17108 ChEBI	D-arabinose	+	carbon source
25163	17634 ChEBI	D-glucose	+	carbon source
25163	16899 ChEBI	D-mannitol	+	carbon source
25163	65327 ChEBI	D-xylose	+	carbon source
25163	4853 ChEBI	esculin	+	hydrolysis
25163	28757 ChEBI	fructose	+	carbon source
25163	5291 ChEBI	gelatin	+	hydrolysis
25163	15428 ChEBI	glycine	+	nitrogen source
25163	16467 ChEBI	L-arginine	-	nitrogen source
25163	17196 ChEBI	L-asparagine	+	nitrogen source
25163	17295 ChEBI	L-phenylalanine	+	nitrogen source
25163	62345 ChEBI	L-rhamnose	+	carbon source
25163	16828 ChEBI	L-tryptophan	-	nitrogen source
25163	17632 ChEBI	nitrate	-	reduction
25163	16634 ChEBI	raffinose	+	carbon source
25163	53258 ChEBI	sodium citrate	+	carbon source
25163	28017 ChEBI	starch	-	hydrolysis
25163	17992 ChEBI	sucrose	+	carbon source
25163	53424 ChEBI	tween 20	+	hydrolysis
25163	53426 ChEBI	tween 80	-	hydrolysis
25163	16199 ChEBI	urea	+	hydrolysis

Metabolite production

@ref	Chebi-ID	Metabolite	Production
25163	15688 ChEBI	acetoin
25163	16136 ChEBI	hydrogen sulfide

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test
25163	15688 ChEBI	acetoin	+

Enzymes

@ref	Value	Activity	Ec
25163	catalase	+	1.11.1.6
25163	cytochrome oxidase	-	1.9.3.1

Fatty acid profile

Metadata FA analysis

@ref

25163

Fatty acid	Percentage
C16:0 iso	29.3
C15:0 iso	15.4
C15:0 anteiso	14.6

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
25163	soil sample	Xishuangbanna’s tropical rain forest, Yunnan Province, south-west China	China	CHN	Asia
67771	From soil sample collected from Xishuangbanna's tropical rain forest	a prefecture in Yunnan Province	China	CHN	Asia

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM1464581v1 assembly for Streptomyces fuscichromogenes CGMCC 4.7110	scaffold	GCA_014645815	1324013.3	2997617145	1324013	50.07

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
25163	Streptomyces fuscichromogenes strain m16 16S ribosomal RNA gene, partial sequence	KC771428	1430		1324013

GC content

@ref	GC-content (mol%)	Method
25163	70	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Streptomyces fuscichromogenes CGMCC 4.7110
NCBI: GCA_014645815

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	yes	87.30	no
125439	motility	BacteriaNetⓘ	no	91.90	no
125439	gram_stain	BacteriaNetⓘ	positive	99.80	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	98.50	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Streptomyces fuscichromogenes CGMCC 4.7110
NCBI: GCA_014645815.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	86.80	yes
125438	anaerobic	anaerobicⓘ	no	96.88	yes
125438	aerobic	aerobicⓘ	yes	93.17	yes
125438	spore-forming	spore-formingⓘ	yes	92.03	no
125438	thermophilic	thermophileⓘ	no	96.00	yes
125438	flagellated	motile2+ⓘ	no	87.60	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Streptomyces fuscichromogenes sp. nov., an actinomycete from soil.	Zhang H, Zheng J, Zhuang J, Xin Y, Zheng X, Zhang J	Int J Syst Evol Microbiol	10.1099/ijsem.0.001573	2017

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#25163	H. Z. Zhang, J.,Zhuang, J.,Xin, Y.,Zheng, X.,Zhang, J.: Streptomyces fuscichromogenes sp. nov., an actinomycete from soil. IJSEM 67: 77 - 81 2017 ( DOI 10.1099/ijsem.0.001573 , PubMed 27902221 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67771	Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Streptomyces fuscichromogenes (CGMCC 4.7110, KCTC 29195, m16)

Name and taxonomic classification