Name: Huakuichenia soli LIP-1
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 133246

Type strain:

Species: Huakuichenia soli

Strain Designation: LIP-1

Culture col. no.: CCTCC AB 2015422, KCTC 39698, JCM 33576

Strain history: CCTCC AB 2015422 <-- J.-D. Jiang; Nanjing Agric. Univ., China: LIP-1.

NCBI tax ID(s): 1848476 (species)

Special Collections

Section

When using BacDive for research please cite our paper

Huakuichenia soli LIP-1 is a Gram-positive, rod-shaped bacterium that was isolated from soil sample from a pesticide factory.

Gram-positive
rod-shaped
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	09-12-2024 (DD-MM-YYYY)
	Domain	*Bacteria*
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Micrococcales*
	Family	*Microbacteriaceae*
	Genus	*Huakuichenia*
	Species	**Huakuichenia soli**
	Full Scientific Name (LPSN)	Huakuichenia soli Zhang et al. 2016

Information on morphological and physiological properties Morphology

[Ref.: #25074]	Gram stain	positive

[Ref.: #25074]	Cell length	0.65-0.70 µm

[Ref.: #25074]	Cell width	0.25-0.3 µm

[Ref.: #25074]	Cell shape	rod-shaped

[Ref.: #25074]	Motility	no

[Ref.: #25074]	Colony color	translucent
[Ref.: #25074]	Incubation period	4 days
[Ref.: #25074]	Cultivation medium used	LB (lysogeny broth) agar

Information on culture and growth conditions Culture and growth conditions

[Ref.: #25074]

Culture medium

LB (lysogeny broth)

[Ref.: #25074]

Culture medium growth

[Ref.: #25074]

Culture medium

LB (lysogeny broth) agar

[Ref.: #25074]

Culture medium growth

		Temperature
[Ref.: #25074]	growth	16.0-37.0 °C
[Ref.: #25074]	optimum	30 °C
[Ref.: #67770]	growth	28 °C

	pH	Kind of pH		pH
[Ref.: #25074]			optimum	7
[Ref.: #25074]			growth	6.0-9.0

Information on physiology and metabolism Physiology and metabolism

[Ref.: #25074]

Ability of spore formation

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #25074]		NaCl		growth	0.0-2.0	%(w/v)
[Ref.: #25074]		NaCl		optimum	0	%(w/v)

[Ref.: #67770]

Observation

quinones: MK-12, MK-11

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #25074]	2-dehydro-D-gluconate ChEBI	+	builds acid from
[Ref.: #25074]	adenosine ChEBI	+	respiration
[Ref.: #25074]	casein	-	hydrolysis
[Ref.: #25074]	citrate ChEBI	-	assimilation
[Ref.: #25074]	D-glucose ChEBI	-	assimilation
[Ref.: #25074]	esculin ChEBI	+	hydrolysis
[Ref.: #25074]	esculin ferric citrate	+	builds acid from
[Ref.: #25074]	gelatin ChEBI	-	hydrolysis
[Ref.: #25074]	glycogen ChEBI	-	assimilation
[Ref.: #25074]	maltose ChEBI	-	assimilation
[Ref.: #25074]	methyl pyruvate ChEBI	+	respiration
[Ref.: #25074]	nitrate ChEBI	-	reduction
[Ref.: #25074]	starch ChEBI	-	hydrolysis
[Ref.: #25074]	tryptophan ChEBI	-	energy source
[Ref.: #25074]	tween 80 ChEBI	-	hydrolysis
[Ref.: #25074]	urea ChEBI	-	hydrolysis
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Production
[Ref.: #25074]	acetoin ChEBI	no
[Ref.: #25074]	hydrogen sulfide ChEBI	no
[Ref.: #25074]	indole ChEBI	no

	Physiological tests	Metabolite	Voges-Proskauer-test	Indole test
[Ref.: #25074]		acetoin ChEBI	-
[Ref.: #25074]		indole ChEBI		-

	Enzyme	Enzyme activity	EC number
[Ref.: #25074]	alkaline phosphatase	+	3.1.3.1
[Ref.: #25074]	catalase	+	1.11.1.6
[Ref.: #25074]	cytochrome oxidase	+	1.9.3.1
[Ref.: #25074]	esterase (C 4)	+
[Ref.: #25074]	esterase Lipase (C 8)	+
[Ref.: #25074]	gelatinase	-
[Ref.: #25074]	leucine arylamidase	+	3.4.11.1
[Ref.: #25074]	naphthol-AS-BI-phosphohydrolase	+
[Ref.: #25074]	tryptophan deaminase	-	4.1.99.1
[Ref.: #25074]	urease	-	3.5.1.5

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #25074]	Sample type/isolated from	soil sample from a pesticide factory
[Ref.: #25074]	Geographic location (country and/or sea, region)	Xinyi, Jiangsu
[Ref.: #25074]	Country	China
[Ref.: #25074]	Country ISO 3 Code	CHN
[Ref.: #25074]	Continent	Asia
[Ref.: #25074]	Geographic location	34.0000°/118.0000°
[Ref.: #25074]	Enrichment culture	minimal salt medium (MSM) agar
[Ref.: #25074]	Enrichment culture composition	1.0 g NH4NO3 , 1.5 g K2HPO4 , 0.5 g KH2PO4 , 0.2 g MgSO4 and 1.0 g NaCl per litredistilled water(pH 7.0) with 3 ml LB (lysogeny broth) medium
[Ref.: #25074]	Enrichment culture duration	7 days
[Ref.: #25074]	Enrichment culture temperature	30 ̊C

[Ref.: #67770]	Sample type/isolated from	Contaminated soil in Xinyi
[Ref.: #67770]	Geographic location (country and/or sea, region)	Jiangsu
[Ref.: #67770]	Country	China
[Ref.: #67770]	Country ISO 3 Code	CHN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Engineered	#Industrial	#Plant (Factory)
#Environmental	#Terrestrial	#Soil

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #25074]	Huakuichenia soli strain LIP-1 16S ribosomal RNA gene, partial sequence	KX230531	1482	GenBank ENA	1848476 tax ID

[Ref.: #25074]

GC-content

63.8 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #25074]

Culture collection no.

CCTCC AB 2015422, KCTC 39698, JCM 33576

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Huakuichenia soli gen. nov., sp. nov., a new member of the family Microbacteriaceae, isolated from contaminated soil.	Zhang L, Chen XL, Hu Q, Ruan ZP, Chen K, Li SP, Jiang JD	Int J Syst Evol Microbiol	10.1099/ijsem.0.001531	2016	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#25074

L. C. Zhang, X. L.,Hu, Q.,Ruan, Z. P.,Chen, K.,Li, S. P.,Jiang, J. D.: Huakuichenia soli gen. nov., sp. nov., a new member of the family Microbacteriaceae, isolated from contaminated soil. IJSEM 66: 5399 - 5405 2016 ( DOI 10.1099/ijsem.0.001531 , PubMed 27692033 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;
* These data were automatically processed and therefore are not curated

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