Teichococcus ruber (S5, KEMB 563-468, JCM 31177)

Name: Teichococcus ruber (S5, KEMB 563-468, JCM 31177)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 133159

Type strain

Strain Designation S5

Culture col. no. S5 KEMB 563-468 JCM 31177

NCBI tax ID(s) 1783359

Special Collections JCM Literature strains

History S.-S. Lee; KEMB, Kyonggi Univ., South Korea; S5.

Links

Teichococcus ruber S5 is an aerobe, chemoorganoheterotroph, Gram-negative bacterium that was isolated from lagoon sediments.

Gram-negative coccus-shaped aerobe chemoorganoheterotroph 16S sequence Bacteria

Name and taxonomic classification

SI-ID 27976

JCM 31177

@ref 20215

Last LPSN update 2026-02-09 11:31:53

Domain Bacteria

Phylum Pseudomonadota

Class Alphaproteobacteria

Order Rhodospirillales

Family Acetobacteraceae

Genus Teichococcus

Species Teichococcus ruber

Full scientific name Teichococcus ruber (Subhash et al. 2016) Liu and Xin 2025

Synonyms (2)

Roseomonas rubra
Pseudoroseomonas rubra

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell shape	Motility
24934	negative	0.7-0.8 µm	coccus-shaped

Colony morphology

@ref	Colony color	Incubation period	Medium used
24934	red	5 days	Subhash’s agar medium

Pigmentation

@ref	Production	Name
24934		carotenoid pigment

Culture and growth conditions

Culture medium

@ref	Name	Growth
24934	Subhash’s agar medium

Culture temp

@ref	Growth	Type	Temperature (°C)
24934	positive	growth	12-45
24934	positive	optimum	30-37
67770	positive	growth	30

Culture pH

@ref	Ability	Type	PH	PH range
24934	positive	optimum	6.5-7.5
24934	positive	growth	6.3-9.0	alkaliphile

Physiology and metabolism

Oxygen tolerance

24934

Oxygen toleranceaerobe

Nutrition type

24934

Typechemoorganoheterotroph

Halophily

@ref	Salt	Growth	Tested relation	Concentration
24934	NaCl	positive	growth	0-3.0 %(w/v)
24934	NaCl	positive	maximum	3 %(w/v)
24934	NaCl	positive	optimum	0.5 %(w/v)

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
24934	35391 ChEBI	aspartate	+	carbon source
24934		casein	+	hydrolysis
24934	17057 ChEBI	cellobiose	-	builds acid from
24934	17057 ChEBI	cellobiose	-	carbon source
24934		crab shell chitin	-	hydrolysis
24934	15824 ChEBI	D-fructose	+	carbon source
24934	15824 ChEBI	D-fructose	+	builds acid from
24934	12936 ChEBI	D-galactose	+	carbon source
24934	12936 ChEBI	D-galactose	+	builds acid from
24934	17634 ChEBI	D-glucose	+	carbon source
24934	17634 ChEBI	D-glucose	+	builds acid from
24934	16899 ChEBI	D-mannitol	+	carbon source
24934	17924 ChEBI	D-sorbitol	+	carbon source
24934	5291 ChEBI	gelatin	-	hydrolysis
24934	17234 ChEBI	glucose	-	fermentation
24934	29987 ChEBI	glutamate	-	carbon source
24934	30849 ChEBI	L-arabinose	+	carbon source
24934	30849 ChEBI	L-arabinose	+	builds acid from
24934	62345 ChEBI	L-rhamnose	-	carbon source
24934	17716 ChEBI	lactose	-	carbon source
24934	17306 ChEBI	maltose	-	carbon source
24934	17306 ChEBI	maltose	-	builds acid from
24934	17632 ChEBI	nitrate	-	reduction
24934	15361 ChEBI	pyruvate	+	carbon source
24934	16634 ChEBI	raffinose	-	builds acid from
24934	28017 ChEBI	starch	+	hydrolysis
24934	17992 ChEBI	sucrose	+	carbon source
24934	17992 ChEBI	sucrose	+	builds acid from
24934	27897 ChEBI	tryptophan	-	energy source
24934	53424 ChEBI	tween 20	-	hydrolysis
24934	53426 ChEBI	tween 80	-	hydrolysis
24934	16199 ChEBI	urea	-	hydrolysis

Metabolite production

@ref	Chebi-ID	Metabolite	Production
24934	15688 ChEBI	acetoin
24934	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Methylred-test	Indole test
24934	15688 ChEBI	acetoin	-
24934	17234 ChEBI	glucose		-
24934	35581 ChEBI	indole			-

Enzymes

@ref	Value	Activity	Ec
24934	acid phosphatase	-	3.1.3.2
24934	alkaline phosphatase	-	3.1.3.1
24934	alpha-chymotrypsin	+	3.4.21.1
24934	alpha-fucosidase	-	3.2.1.51
24934	alpha-galactosidase	+	3.2.1.22
24934	alpha-glucosidase	+	3.2.1.20
24934	alpha-mannosidase	-	3.2.1.24
24934	arginine decarboxylase	-	4.1.1.19
24934	beta-galactosidase	+	3.2.1.23
24934	beta-glucosidase	-	3.2.1.21
24934	beta-glucuronidase	-	3.2.1.31
24934	catalase	+	1.11.1.6
24934	cystine arylamidase	-	3.4.11.3
24934	cytochrome oxidase	+	1.9.3.1
24934	esterase	+
24934	esterase lipase (C 8)	-
24934	leucine arylamidase	+	3.4.11.1
24934	lipase (C 14)	-
24934	lysine decarboxylase	-	4.1.1.18
24934	N-acetyl-beta-glucosaminidase	-	3.2.1.52
24934	naphthol-AS-BI-phosphohydrolase	-
24934	trypsin	-	3.4.21.4
24934	tryptophan deaminase	-	4.1.99.1
24934	valine arylamidase	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Sediment
#Environmental	#Aquatic	-
#Environmental	#Aquatic	#Marine

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
24934	lagoon sediments	North Carolina	USA	USA	North America
67770	Lagoon sediments	NC	USA	USA	North America

Taxonmaps

69479

Global distribution of 16S sequence LT009499 (>99% sequence identity) for Roseomonas from Microbeatlas

Aquatic Samples	351
Soil Samples	422
Animal Samples	523
Plant Samples	160
Total Samples	1456

Interaction and safety

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
24934	Roseomonas rubra partial 16S rRNA gene, type strain S5T	LT009499	1430		1783359

GC content

@ref	GC-content (mol%)	Method
24934	73.5	high performance liquid chromatography (HPLC)

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
	Validation List no. 221: valid publication of new names and new combinations effectively published outside the IJSEM.	Oren A, Goker M.	Int J Syst Evol Microbiol	10.1099/ijsem.0.006562	2025
Phylogeny	Roseomonas rubra sp. nov., isolated from lagoon sediments.	Subhash Y, Bang JJ, You TH, Lee SS	Int J Syst Evol Microbiol	10.1099/ijsem.0.001271	2016

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#24934	Y. B. Subhash, John J.,You, Taek H.,Lee, Sang-Seob: Roseomonas rubra sp. nov., isolated from lagoon sediments. IJSEM 66: 3821 - 3827 2016 ( DOI 10.1099/ijsem.0.001271 , PubMed 27381046 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Teichococcus ruber (S5, KEMB 563-468, JCM 31177)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Pigmentation

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Nutrition type

Halophily

Metabolite utilization

Metabolite production

Metabolite tests

Enzymes

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Sequence information

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

BacDive

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