Name: Racemicystis persica 37
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 133077

Type strain:

Species: Racemicystis persica

Strain Designation: 37

Culture col. no.: DSM 103165, NCCB 100606, MSR MSr11462, MSR 11462

Strain history: <- J. Wink, HZI, Braunschweig, Germany <- A. Moradi, Faculty of Biological Sciences, Iran

NCBI tax ID(s): 1885912 (species)

Section

Racemicystis persica 37 is an aerobe, chemoheterotroph, spore-forming bacterium that builds fruiting-like bodies and was isolated from beach sand.

Gram-negative
motile
rod-shaped
spore-forming
aerobe
chemoheterotroph
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	25-08-2022 (DD-MM-YYYY)
	Domain	Bacteria
	Phylum	Pseudomonadota
	Class	Deltaproteobacteria
	Order	Myxococcales
	Family	Polyangiaceae
	Genus	Racemicystis
	Species	Racemicystis persica
	Full Scientific Name (PNU)	Racemicystis persica Moradi et al. 2017

Information on morphological and physiological properties Morphology

[Ref.: #25205]	Gram stain	negative
[Ref.: #25205]	Cell length	3.0-12.0 µm
[Ref.: #25205]	Cell width	1.2-3.0 µm
[Ref.: #25205]	Cell shape	rod-shaped
[Ref.: #25205]	Motility	yes

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Colony color

orange to beige

[Ref.: #25205]	Multicellular complex forming ability	yes
[Ref.: #25205]	Multicellular complex name	fruiting-like bodies
[Ref.: #25205]	Multicellular complex size	200.0-800.0

Information on culture and growth conditions Culture and growth conditions

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Culture medium

medium CY

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Culture medium growth

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Culture medium

medium H

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Culture medium growth

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Culture medium

medium E

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Culture medium growth

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Culture medium

medium K

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Culture medium growth

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Culture medium

VY/2 modified

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Culture medium growth

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Culture medium composition

expand / minimize

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Culture medium

VY/2 AGAR (DSMZ Medium 9)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #24865]			growth	28 °C

[Ref.: #24865]	Temperature range	mesophilic
[Ref.: #25205]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #25205]			minimum	7
[Ref.: #25205]			optimum	5.0-6.0

Information on physiology and metabolism Physiology and metabolism

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Oxygen tolerance

aerobe

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Nutrition type

chemoheterotroph

[Ref.: #25205]	Spore description	1.2-1.5 x 3.0-8.0 µm with blunted ends
[Ref.: #25205]	Type of spore	myxospore
[Ref.: #25205]	Ability of spore formation	yes

	Metabolite	Antibiotic sensitivity	Antibiotic resistance
[Ref.: #25205]	ampicillin ChEBI	yes
[Ref.: #25205]	bacillomycin	yes
[Ref.: #25205]	cephalosporin ChEBI	yes
[Ref.: #25205]	chloramphenicol ChEBI	yes
[Ref.: #25205]	fusidate ChEBI		yes
[Ref.: #25205]	gentamicin ChEBI		yes
[Ref.: #25205]	hygromycin ChEBI	yes
[Ref.: #25205]	kanamycin ChEBI	yes
[Ref.: #25205]	oxytetracycline ChEBI	yes
[Ref.: #25205]	polymyxin ChEBI		yes
[Ref.: #25205]	spectinomycin ChEBI	yes
[Ref.: #25205]	thiostrepton ChEBI	yes
[Ref.: #25205]	trimethoprim ChEBI		yes
	Only first 10 entries are displayed. Click here to see all.

	Enzyme	Enzyme activity	EC number
[Ref.: #25205]	acid phosphatase	+	3.1.3.2
[Ref.: #25205]	alkaline phosphatase	+	3.1.3.1
[Ref.: #25205]	alpha-chymotrypsin	+	3.4.21.1
[Ref.: #25205]	alpha-fucosidase	-	3.2.1.51
[Ref.: #25205]	alpha-galactosidase	-	3.2.1.22
[Ref.: #25205]	alpha-glucosidase	+	3.2.1.20
[Ref.: #25205]	alpha-mannosidase	-	3.2.1.24
[Ref.: #25205]	beta-galactosidase	-	3.2.1.23
[Ref.: #25205]	beta-glucosidase	+	3.2.1.21
[Ref.: #25205]	beta-glucuronidase	-	3.2.1.31
[Ref.: #25205]	cystine arylamidase	+	3.4.11.3
[Ref.: #25205]	esterase (C 4)	+
[Ref.: #25205]	esterase Lipase (C 8)	+
[Ref.: #25205]	leucine arylamidase	+	3.4.11.1
[Ref.: #25205]	lipase (C 14)	+
[Ref.: #25205]	N-acetyl-beta-glucosaminidase	-	3.2.1.52
[Ref.: #25205]	naphthol-AS-BI-phosphohydrolase	+
[Ref.: #25205]	trypsin	-	3.4.21.4
[Ref.: #25205]	valine arylamidase	+
	Only first 10 entries are displayed. Click here to see all.

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #25205]

Fatty acid	Percentage
C17:0 iso	17.4
C15:0 iso	11
C18:1 2OH	9.6
C18:1	8.1
iso-C15:0 OAG	7.8
C16:1 OAG	7.7
iso-C17:1 2-OH	5.7
C16:0	5.3
C16:1	4.6
C18:0	4.3
C17:1 iso	3.6
C16:0 OAG	2.9
iso-C17:0 OAG	1.8
C16:0 iso	1.1
C18:2	1
C14:0 OAG	0.9
C17:0	0.8
iso-C17:1 OAG	0.8
iso-C18:1 2-OH	0.7
C17:1	0.5
C16:1 2OH	0.5
C17:0 OAG	0.4
C14:0	0.4
C17:0 anteiso	0.4
C26:0	0.4
iso-C16:0 OAG	0.3
iso-C19:1 2-OH	0.3
C15:0 OAG	0.3
C18:0 2OH	0.3
C13:0 iso	0.2
C15:0	0.2
iso-C19:0 2-OH	0.1
C15:1 iso	0.1
C19:0	0.1
C17:0 iso 2OH	0.1
C14:0 iso	0.1
C15:0 anteiso	0.1

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #24865]	Sample type/isolated from	beach sand
[Ref.: #24865]	Geographic location (country and/or sea, region)	Persian Gulf, Kish Island beach
[Ref.: #24865]	Country	Iran
[Ref.: #24865]	Country ISO 3 Code	IRN
[Ref.: #24865]	Continent	Asia
[Ref.: #24865]	Geographic location	26.5572°/54.0243°

[Ref.: #25205]	Sample type/isolated from	Kish Island beach sand
[Ref.: #25205]	Sampling date	2015
[Ref.: #25205]	Enrichment culture	buffered VY/2 and CY agar

Isolation sources categories

#Environmental	#Terrestrial	#Coast
#Environmental	#Terrestrial	#Sandy

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

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Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #24865]	Racemicystis persica strain MSr11462 16S ribosomal RNA gene, partial sequence	KX443485	1505	ENA	1885912 tax ID

Availability in culture collections External links

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Culture collection no.

DSM 103165, NCCB 100606, MSR MSr11462, MSR 11462

Literature:

Title	Authors	Journal	DOI	Year	Mesh	Topic	Topic2
Racemicystis persica sp. nov., a myxobacterium from soil.	Moradi A, Ebrahimipour GH, Mohr KI, Kampfer P, Glaeser SP, Hennessen F, Gemperlein K, Awal RP, Wolf C, Muller R, Wink J	Int J Syst Evol Microbiol	10.1099/ijsem.0.001655	2017	Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Fatty Acids/chemistry, Iran, Islands, Myxococcales/classification/genetics/isolation & purification, Nucleic Acid Hybridization, Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, *Soil Microbiology	Phylogeny	Transcriptome	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#24865

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 103165

#25205

A. E. Moradi, G. H.,Mohr, K. I.,Kämpfer, P.,Glaeser, S. P.,Hennessen, F.,Gemperlein, K.,Awal, R. P.,Wolf, C.,Müller, R.,Wink, J.: Racemicystis persica sp. nov., a myxobacterium from soil. IJSEM 67: 472 - 478 2017 ( DOI 10.1099/ijsem.0.001655 , PubMed 27902273 )

* These data were automatically processed and therefore are not curated

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