Halobacillus halophilus (DSM 2266, ATCC 35676, NCIMB 2269)

Name: Halobacillus halophilus (DSM 2266, ATCC 35676, NCIMB 2269)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 1327

Type strain

Strain Designation 3

Culture col. no. DSM 2266 ATCC 35676 NCIMB 2269 3 NBRC 102448 7 more

NCBI tax ID(s) 866895 1570

Special Collections DSMZ JCM KCTC Literature strains

History DSMZ <- H.J. Rolf, 3 JCM <-- IAM 13060 <-- M. V. Hao and K. Komagata HK 814 <-- CCM 3527 <-- DSM 2266 <-- H. J. Rolf 3.

Links

Halobacillus halophilus 3 is an obligate aerobe, moderately halophilic, chemoorganotroph bacterium that has a orange pigmentation and was isolated from salt marsh soil.

pigmented rod-shaped motile Gram-positive spore-forming chemoorganotroph moderately halophilic obligate aerobe Bacteria 16S sequence genome sequence

Name and taxonomic classification

SI-ID 9982

LMG 17431,ATCC 35676,DSM 2266,NCIMB 2269,CCM 3527,CECT 5013,KCTC 3685,NCIB 2269,IAM 12846,IAM 13060,JCM 2486,JCM 20832,NBRC 102448

@ref 20215

Last LPSN update 2026-05-29 08:25:14

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Bacillaceae

Genus Halobacillus

Species Halobacillus halophilus

Full scientific name Halobacillus halophilus (Claus et al. 1984) Spring et al. 1996

Synonyms (1)

Sporosarcina halophila

BacDive ID	Other strains from **Halobacillus halophilus** (26)	Type strain
1328	H. halophilus 6, DSM 2500, JCM 20836, IAM 13064
1329	H. halophilus 11, DSM 2501, JCM 20837, IAM 13065
1330	H. halophilus 14, DSM 2502
1331	H. halophilus MA 21, DSM 6116
1332	H. halophilus MA 28, DSM 6117
1333	H. halophilus MA 30, DSM 6118
1334	H. halophilus MA 15, DSM 6120
1335	H. halophilus MA 16, DSM 6121
1337	H. halophilus MA 22, DSM 6123
1338	H. halophilus MA 5, DSM 5938
1339	H. halophilus MA 7, DSM 5939
1340	H. halophilus MA 8, DSM 5965
1341	H. halophilus MA13, DSM 5980
23719	H. halophilus 18, DSM 2503, JCM 20838, IAM 13066
23720	H. halophilus 19, strain 19, DSM 2504
23721	H. halophilus 20, DSM 2505
23722	H. halophilus 23, DSM 2506, JCM 20839, IAM 13067
23723	H. halophilus 24, DSM 2507, JCM 20840, IAM 13068
23724	H. halophilus 26, DSM 2508
23725	H. halophilus 27, DSM 2509
162997	H. halophilus JCM 20833, IAM 13061
162998	H. halophilus JCM 20834, IAM 13062
162999	H. halophilus JCM 20835, IAM 13063
163000	H. halophilus JCM 20841, IAM 13069
163001	H. halophilus JCM 20842, IAM 13070
163002	H. halophilus JCM 20843, IAM 13071

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility
22983	positive	rod-shaped

Pigmentation

@ref	Production	Color
22983		orange

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
1011	MARINE AGAR (DSMZ Medium 123)		Medium recipe at MediaDive	Name: MARINE AGAR (DSMZ Medium 123) Composition: NaCl 24.0 g/l Agar 15.0 g/l MgCl2 x 6 H2O 11.0 g/l Bacto peptone 5.0 g/l Na2SO4 4.0 g/l CaCl2 x 6 H2O 2.0 g/l Yeast extract 1.0 g/l KCl 0.7 g/l KBr 0.1 g/l SrCl2 x 6 H2O 0.04 g/l H3BO3 0.03 g/l NaSiO3 x 9 H2O 0.005 g/l NaF 0.003 g/l NH4NO3 0.002 g/l Fe(III)PO4 x 4 H2O 0.001 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
1011	positive	growth	30
67770	positive	growth	30

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
22983	obligate aerobe
125439	facultative anaerobe	94.164

Nutrition type

22983

Typechemoorganotroph

Spore formation

@ref	Type of spore	Confidence
22983	endospore
125438		95.074
125439		96.192

Halophily

22983

Halophily levelmoderately halophilic

Murein

@ref	Murein short key	Type
1011	A21.04	A4ß L-Orn-D-Asp

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
22983	17632 ChEBI	nitrate	-	reduction

Metabolite production

@ref	Chebi-ID	Metabolite	Production
22983	15688 ChEBI	acetoin

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test
22983	15688 ChEBI	acetoin	-

Enzymes

@ref	Value	Activity	Ec
22983	catalase	+	1.11.1.6
22983	cytochrome oxidase	+	1.9.3.1
22983	DNase	+
22983	urease	-	3.5.1.5

Pathway annotation

Computationally determined by

@ref	pathway	enzyme coverage	annotated reactions
66794	cellulose degradation	100	5 of 5
66794	C4 and CAM-carbon fixation	100	8 of 8
66794	vitamin K metabolism	100	5 of 5
66794	sulfopterin metabolism	100	4 of 4
66794	acetate fermentation	100	4 of 4
66794	aspartate and asparagine metabolism	100	9 of 9
66794	coenzyme A metabolism	100	4 of 4
66794	formaldehyde oxidation	100	3 of 3
66794	glycine betaine biosynthesis	100	5 of 5
66794	threonine metabolism	100	10 of 10
66794	chorismate metabolism	100	9 of 9
66794	adipate degradation	100	2 of 2
66794	gluconeogenesis	100	8 of 8
66794	CDP-diacylglycerol biosynthesis	100	2 of 2
66794	UDP-GlcNAc biosynthesis	100	3 of 3
66794	lipoate biosynthesis	100	5 of 5
66794	methylglyoxal degradation	100	5 of 5
66794	starch degradation	100	10 of 10
66794	folate polyglutamylation	100	1 of 1
66794	anapleurotic synthesis of oxalacetate	100	1 of 1
66794	palmitate biosynthesis	100	22 of 22
66794	aerobactin biosynthesis	100	1 of 1
66794	ppGpp biosynthesis	100	4 of 4
66794	ceramide biosynthesis	100	1 of 1
66794	suberin monomers biosynthesis	100	2 of 2
66794	L-lactaldehyde degradation	100	3 of 3
66794	cis-vaccenate biosynthesis	100	2 of 2
66794	photosynthesis	92.86	13 of 14
66794	tetrahydrofolate metabolism	92.86	13 of 14
66794	heme metabolism	92.86	13 of 14
66794	vitamin B1 metabolism	92.31	12 of 13
66794	Entner Doudoroff pathway	90	9 of 10
66794	propionate fermentation	90	9 of 10
66794	alanine metabolism	89.66	26 of 29
66794	valine metabolism	88.89	8 of 9
66794	CO2 fixation in Crenarchaeota	88.89	8 of 9
66794	glutamate and glutamine metabolism	85.71	24 of 28
66794	phenylalanine metabolism	84.62	11 of 13
66794	leucine metabolism	84.62	11 of 13
66794	proline metabolism	81.82	9 of 11
66794	pentose phosphate pathway	81.82	9 of 11
66794	pyrimidine metabolism	80	36 of 45
66794	glycogen metabolism	80	4 of 5
66794	4-hydroxyphenylacetate degradation	80	8 of 10
66794	flavin biosynthesis	80	12 of 15
66794	peptidoglycan biosynthesis	80	12 of 15
66794	citric acid cycle	78.57	11 of 14
66794	molybdenum cofactor biosynthesis	77.78	7 of 9
66794	NAD metabolism	77.78	14 of 18
66794	serine metabolism	77.78	7 of 9
66794	urea cycle	76.92	10 of 13
66794	butanoate fermentation	75	3 of 4
66794	CMP-KDO biosynthesis	75	3 of 4
66794	glycogen biosynthesis	75	3 of 4
66794	isoleucine metabolism	75	6 of 8
66794	lysine metabolism	73.81	31 of 42
66794	methionine metabolism	73.08	19 of 26
66794	d-xylose degradation	72.73	8 of 11
66794	purine metabolism	72.34	68 of 94
66794	cardiolipin biosynthesis	71.43	5 of 7
66794	glutathione metabolism	71.43	10 of 14
66794	propanol degradation	71.43	5 of 7
66794	non-pathway related	71.05	27 of 38
66794	tryptophan metabolism	71.05	27 of 38
66794	arginine metabolism	70.83	17 of 24
66794	glycolysis	70.59	12 of 17
66794	cyanate degradation	66.67	2 of 3
66794	acetyl CoA biosynthesis	66.67	2 of 3
66794	acetoin degradation	66.67	2 of 3
66794	oxidative phosphorylation	65.93	60 of 91
66794	isoprenoid biosynthesis	65.38	17 of 26
66794	ketogluconate metabolism	62.5	5 of 8
66794	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	62.5	5 of 8
66794	lipid metabolism	61.29	19 of 31
66794	cysteine metabolism	61.11	11 of 18
66794	metabolism of amino sugars and derivatives	60	3 of 5
66794	3-chlorocatechol degradation	60	3 of 5
66794	factor 420 biosynthesis	60	3 of 5
66794	reductive acetyl coenzyme A pathway	57.14	4 of 7
66794	d-mannose degradation	55.56	5 of 9
66794	histidine metabolism	55.17	16 of 29
66794	sulfate reduction	53.85	7 of 13
66794	dTDPLrhamnose biosynthesis	50	4 of 8
66794	degradation of sugar alcohols	50	8 of 16
66794	toluene degradation	50	2 of 4
66794	degradation of pentoses	50	14 of 28
66794	androgen and estrogen metabolism	50	8 of 16
66794	ribulose monophosphate pathway	50	1 of 2
66794	myo-inositol biosynthesis	50	5 of 10
66794	pantothenate biosynthesis	50	3 of 6
66794	coenzyme M biosynthesis	50	5 of 10
66794	glycolate and glyoxylate degradation	50	3 of 6
66794	ethanol fermentation	50	1 of 2
66794	glycine metabolism	50	5 of 10
66794	phenylmercury acetate degradation	50	1 of 2
66794	quinate degradation	50	1 of 2
66794	biotin biosynthesis	50	2 of 4
66794	degradation of sugar acids	48	12 of 25
66794	lipid A biosynthesis	44.44	4 of 9
66794	arachidonic acid metabolism	44.44	8 of 18
66794	ubiquinone biosynthesis	42.86	3 of 7
66794	tyrosine metabolism	42.86	6 of 14
66794	degradation of aromatic, nitrogen containing compounds	41.67	5 of 12
66794	ascorbate metabolism	40.91	9 of 22
66794	phenylacetate degradation (aerobic)	40	2 of 5
66794	gallate degradation	40	2 of 5
66794	arachidonate biosynthesis	40	2 of 5
66794	polyamine pathway	39.13	9 of 23
66794	phenylpropanoid biosynthesis	38.46	5 of 13
66794	phosphatidylethanolamine bioynthesis	38.46	5 of 13
66794	carnitine metabolism	37.5	3 of 8
66794	vitamin B6 metabolism	36.36	4 of 11
66794	carotenoid biosynthesis	36.36	8 of 22
66794	metabolism of disaccharids	36.36	4 of 11
66794	enterobactin biosynthesis	33.33	1 of 3
66794	(5R)-carbapenem carboxylate biosynthesis	33.33	1 of 3
66794	selenocysteine biosynthesis	33.33	2 of 6
66794	4-hydroxymandelate degradation	33.33	3 of 9
66794	octane oxidation	33.33	1 of 3
66794	degradation of hexoses	33.33	6 of 18
66794	allantoin degradation	33.33	3 of 9
66794	IAA biosynthesis	33.33	1 of 3
66794	ginsenoside metabolism	31.25	5 of 16
66794	bile acid biosynthesis, neutral pathway	29.41	5 of 17
66794	benzoyl-CoA degradation	28.57	2 of 7
66794	cholesterol biosynthesis	27.27	3 of 11
66794	lactate fermentation	25	1 of 4
66794	phenol degradation	25	5 of 20
66794	cyclohexanol degradation	25	1 of 4
66794	vitamin E metabolism	25	1 of 4
66794	alginate biosynthesis	25	1 of 4
66794	nitrate assimilation	22.22	2 of 9
66794	chlorophyll metabolism	22.22	4 of 18

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Salt marsh
#Environmental	#Terrestrial	#Soil
#Condition	#Saline	-

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
1011	salt marsh soil	Sylt	Germany	DEU	Europe
67770	Salt marsh soil		Germany	DEU	Europe

Taxonmaps

69479

Global distribution of 16S sequence AB681790 (>99% sequence identity) for Halobacillus from Microbeatlas

Aquatic Samples	246
Soil Samples	116
Animal Samples	13
Plant Samples	73
Total Samples	448

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
1011	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM28451v1 assembly for Halobacillus halophilus DSM 2266 type strain: DSM 2266	complete	GCA_000284515	866895.3	2513237186	866895	98.48

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
67770	Halobacillus halophilus gene for 16S rRNA, partial sequence, strain: NBRC 102448	AB681790	1492		1570

GC content

@ref	GC-content (mol%)
22983	40-43
1011	40.8

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM28451v1 assembly for Halobacillus halophilus DSM 2266 type strain: DSM 2266
BV-BRC: 866895.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	facultative anaerobe	94.16	no
125439	gram_stain	BacteriaNetⓘ	variable	68.79	no
125439	motility	BacteriaNetⓘ	yes	88.23	no
125439	spore_formation	BacteriaNetⓘ	yes	96.19	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Halobacillus halophilus DSM 2266 type strain: DSM 2266
NCBI: GCA_000284515.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	83.32	yes
125438	anaerobic	anaerobicⓘ	no	91.64	no
125438	aerobic	aerobicⓘ	yes	76.72	no
125438	spore-forming	spore-formingⓘ	yes	95.07	yes
125438	thermophilic	thermophileⓘ	no	92.49	yes
125438	flagellated	motile2+ⓘ	yes	80.43	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Genetics	Comparative genomics analysis of Bacillus altitudinis G03 provides insights into its biocontrol and probiotic traits.	Chen D, Lin J, Yan Y, Pi J, Xu JF, Chen L.	BMC Genomics	10.1186/s12864-025-11842-0	2025
Genetics	Integrated Genomic and Phenotypic Analysis of Bacillus safensis LG01 Highlights Its Prospects in Biotechnology and Biocontrol.	Yang L, Shuai Y, Ren J, Yang Y, Jiang Z, Lu Y, Ge Z.	Microorganisms	10.3390/microorganisms13112605	2025
	Draft Genome Sequence of Exiguobacterium sp. Strain N5, Isolated from a Recreational Freshwater Kettle Lake in Ontario.	Bryan N, Anderson R, Lawal OU, Parreira VR, Goodridge L.	Microbiol Resour Announc	10.1128/mra.01261-22	2023
	The polyextremophile Natranaerobius thermophilus adopts a dual adaptive strategy to long-term salinity stress, simultaneously accumulating compatible solutes and K.	Xing Q, Zhang S, Tao X, Mesbah NM, Mao X, Wang H, Wiegel J, Zhao B.	Appl Environ Microbiol	10.1128/aem.00145-24	2024
Genetics	Exploring the diversity and genomics of cultivable Bacillus-related endophytic bacteria from the medicinal plant Galium aparine L.	Rutkowska N, Daroch M, Marchut-Mikolajczyk O.	Front Microbiol	10.3389/fmicb.2025.1612860	2025
Genetics	Draft genome sequence of potato crop bacterial isolates and nanoparticles-intervention for the induction of secondary metabolites biosynthesis.	Al-Theyab N, Alrasheed O, Abuelizz HA, Liang M.	Saudi Pharm J	10.1016/j.jsps.2023.04.016	2023
	Genomic Analysis of Endophytic Bacillus-Related Strains Isolated from the Medicinal Plant Origanum vulgare L. Revealed the Presence of Metabolic Pathways Involved in the Biosynthesis of Bioactive Compounds.	Semenzato G, Alonso-Vasquez T, Del Duca S, Vassallo A, Riccardi C, Zaccaroni M, Mucci N, Padula A, Emiliani G, Palumbo Piccionello A, Puglia AM, Fani R.	Microorganisms	10.3390/microorganisms10050919	2022
	Identification of Trans-4-Hydroxy-L-Proline as a Compatible Solute and Its Biosynthesis and Molecular Characterization in Halobacillus halophilus.	Kim KH, Jia B, Jeon CO.	Front Microbiol	10.3389/fmicb.2017.02054	2017
	Culturable bacteria diversity in stem liquid and resina from Populus euphratica and screening of plant growth-promoting bacteria.	Anwar N, Jiang Y, Ma W, Yao Y, Li J, Ababaikeli G, Li G, Ma T.	BMC Microbiol	10.1186/s12866-022-02731-7	2022
	Whole genome sequencing and comparative genomic analyses of Planococcus alpniumensis MSAK28401^T, a new species isolated from Antarctic krill.	Wang Y, Ma L, He J, Liu Z, Weng S, Wang L, He J, Guo C.	BMC Microbiol	10.1186/s12866-021-02347-3	2021
	Sulfur-Oxidizing Bacteria Alleviate Salt and Cadmium Stress in Halophyte Tripolium pannonicum (Jacq.) Dobrocz.	Kozminska A, Kaminska I, Hanus-Fajerska E.	Int J Mol Sci	10.3390/ijms25052455	2024
	An Efficient Minimum Free Energy Structure-Based Search Method for Riboswitch Identification Based on Inverse RNA Folding.	Drory Retwitzer M, Kifer I, Sengupta S, Yakhini Z, Barash D.	PLoS One	10.1371/journal.pone.0134262	2015
Metabolism	Genome-scale metabolic network reconstruction and in silico flux analysis of the thermophilic bacterium Thermus thermophilus HB27.	Lee NR, Lakshmanan M, Aggarwal S, Song JW, Karimi IA, Lee DY, Park JB.	Microb Cell Fact	10.1186/1475-2859-13-61	2014
Pathogenicity	Tetramethylpyrazine-Inducible Promoter Region from Rhodococcus jostii TMP1.	Stanislauskiene R, Kutanovas S, Kaliniene L, Bratchikov M, Meskys R.	Molecules	10.3390/molecules23071530	2018
	Dissemination of 6S RNA among bacteria.	Wehner S, Damm K, Hartmann RK, Marz M.	RNA Biol	10.4161/rna.29894	2014
Metabolism	Chloride, a new environmental signal molecule involved in gene regulation in a moderately halophilic bacterium, Halobacillus halophilus.	Roessler M, Muller V.	J Bacteriol	10.1128/jb.184.22.6207-6215.2002	2002
	Validating an Automated Nucleic Acid Extraction Device for Omics in Space Using Whole Cell Microbial Reference Standards.	Urbaniak C, Wong S, Tighe S, Arumugam A, Liu B, Parker CW, Wood JM, Singh NK, Skorupa DJ, Peyton BM, Jenson R, Karouia F, Dragon J, Venkateswaran K.	Front Microbiol	10.3389/fmicb.2020.01909	2020
	Quantitative and physiological analyses of chloride dependence of growth of halobacillus halophilus	Roessler M, Muller V.	Appl Environ Microbiol	10.1128/aem.64.10.3813-3817.1998	1998
Genetics	Osmotic Adaptation and Compatible Solute Biosynthesis of Phototrophic Bacteria as Revealed from Genome Analyses.	Imhoff JF, Rahn T, Kunzel S, Keller A, Neulinger SC.	Microorganisms	10.3390/microorganisms9010046	2020
Genetics	Genomic Methods and Microbiological Technologies for Profiling Novel and Extreme Environments for the Extreme Microbiome Project (XMP).	Tighe S, Afshinnekoo E, Rock TM, McGrath K, Alexander N, McIntyre A, Ahsanuddin S, Bezdan D, Green SJ, Joye S, Stewart Johnson S, Baldwin DA, Bivens N, Ajami N, Carmical JR, Herriott IC, Colwell R, Donia M, Foox J, Greenfield N, Hunter T, Hoffman J, Hyman J, Jorgensen E, Krawczyk D, Lee J, Levy S, Garcia-Reyero N, Settles M, Thomas K, Gomez F, Schriml L, Kyrpides N, Zaikova E, Penterman J, Mason CE.	J Biomol Tech	10.7171/jbt.17-2801-004	2017
	The GbsR Family of Transcriptional Regulators: Functional Characterization of the OpuAR Repressor.	Ronzheimer S, Warmbold B, Arnhold C, Bremer E.	Front Microbiol	10.3389/fmicb.2018.02536	2018
	Biology of moderately halophilic aerobic bacteria.	Ventosa A, Nieto JJ, Oren A.	Microbiol Mol Biol Rev	10.1128/mmbr.62.2.504-544.1998	1998
Genetics	Microbial culturomics to isolate halophilic bacteria from table salt: genome sequence and description of the moderately halophilic bacterium Bacillus salis sp. nov.	Seck EH, Diop A, Armstrong N, Delerce J, Fournier PE, Raoult D, Khelaifia S.	New Microbes New Infect	10.1016/j.nmni.2017.12.006	2018
Genetics	Microbial culturomics unravels the halophilic microbiota repertoire of table salt: description of Gracilibacillus massiliensis sp. nov.	Diop A, Khelaifia S, Armstrong N, Labas N, Fournier PE, Raoult D, Million M.	Microb Ecol Health Dis	10.3402/mehd.v27.32049	2016
Phylogeny	Halobacillus andaensis sp. nov., a moderately halophilic bacterium isolated from saline and alkaline soil.	Wang K, Zhang L, Yang Y, Pan Y, Meng L, Liu H, Hong S, Huang H, Jiang J	Int J Syst Evol Microbiol	10.1099/ijs.0.000198	2015
Phylogeny	Sporosarcina halophila sp. nov., an Obligate, Slightly Halophilic Bacterium from Salt Marsh Soils.	Claus D, Fahmy F, Rolf HJ, Tosunoglu N	Syst Appl Microbiol	10.1016/S0723-2020(83)80007-1	1983

References

#1011	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 2266
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#22983	S. SPRING,W. LUDWIG,M. C. MARQUEZ,A. VENTOSA,K.-H. SCHLEIFER: Halobacillus gen. nov., with Descriptions of Halobacillus litoralis sp. nov. and Halobacillus trueperi sp. nov., and Transfer of Sporosarcina halophila to Halobacillus halophilus comb. nov.. IJSEM 46: 492 - 496 1996 ( DOI 10.1099/00207713-46-2-492 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#66794	Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Content

About us

Halobacillus halophilus (DSM 2266, ATCC 35676, NCIMB 2269)

Name and taxonomic classification

Morphology

Cell morphology

Pigmentation

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Nutrition type

Spore formation

Halophily

Murein

Metabolite utilization

Metabolite production

Metabolite tests

Enzymes

Pathway annotation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_000284515

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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